Gene

KWMTBOMO03612

Pre Gene Modal

BGIBMGA006271

Annotation

PREDICTED:_putative_thiamine_transporter_SLC35F3_[Bombyx_mori]

Location

Bomo_Chr6(-):13514248-13517910      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.24

CDS

ATGGCAAGGGACGGTGATGTTCCCACGATTTTTAATCCAAAACGCGTACGTGCGCCTTCGGTGATAATAACCAGTGAAGAAGTGGTAGAAAGCGAAAGAAATTGCGTTGATGGAGATAGAGAAAGGCCAAACGGACCGCCGACGCCGCTCAGCCCTCGTGTTCCATTGACGCCACAGGCCTCCGTTTGTTCGGCGCCTCCGCTAACAACTCAACCTTCACTACAACAAGCTTACAGCGAGTCAGCTACTAGTAGTCAAGACGAAGAGCGCCAGCTTCGTGATAAAAAGTGCCCACGTTCGTGTTGCTCCAAGTTTGCTAAAAAAATCTACTATGGCATATGTGTGATGCTGACGCTAACTACATCATGGGTGACAACAACACATTGTATCAAACATTTGTACCTAGAGGAATATCCTTATAGTGGCTATTTTTCTACTTATACTACCGAAGCAGCCACAATCGTACTCCATAACAATAGCACAGATAAATTACATAATAACCTTTATAAAGCACCATTCTTCACAGCCTGGTTTTGCACAAACTGGTTGATATTTTTCTATCCTCTGTACATCATTGTGATGCTCATACATAATAAATGTAAATCTGCAAATGATGTTGTGTTTGATGCATTCAGCGATTTCAAGGAGAAAGGATTCACTTTTGCAAGATTTATTAGCCGCTGCGGACTCTTCTGTCTGTTGTGGGTGGTCACCATCTACATGTATACATACTCCCTGAAGATCCTGTTGTCCACTGATGTAGTTGCACTGTTTGCTACCAATGTGTCTTGCATCTATCTGCTGTCCTGGGTGATATTGCATGAGCAGTTTGTCGGTGTCAGGATTGTAGCCGCGATACTGTGTGACACCGGTATCGCTCTACTGGCGTACATGGACGGCATCACCGGGAGCTCCACCCTCGGCGGGGTCGTGCTCGCCGCGTGTGCTGCTGCAGGATTCGCCATCTTCAAGGTTCGTATTGAGCTAGCACGCTCCGGACAAGCCGGTCGATAG

Protein

MARDGDVPTIFNPKRVRAPSVIITSEEVVESERNCVDGDRERPNGPPTPLSPRVPLTPQASVCSAPPLTTQPSLQQAYSESATSSQDEERQLRDKKCPRSCCSKFAKKIYYGICVMLTLTTSWVTTTHCIKHLYLEEYPYSGYFSTYTTEAATIVLHNNSTDKLHNNLYKAPFFTAWFCTNWLIFFYPLYIIVMLIHNKCKSANDVVFDAFSDFKEKGFTFARFISRCGLFCLLWVVTIYMYTYSLKILLSTDVVALFATNVSCIYLLSWVILHEQFVGVRIVAAILCDTGIALLAYMDGITGSSTLGGVVLAACAAAGFAIFKVRIELARSGQAGR

Uniprot

H9J9S8   A0A2A4JS09   A0A2W1C097   A0A2H1WTU3   A0A194QHB9   A0A212F592   + More
A0A0L7LR13   A0A194R6N9   A0A2J7Q6J6   T1HA72   E0VDY0   A0A1B6DFH4   A0A1W4XFB1   A0A1W4X5S9   A0A1W4XG83   A0A154P4H4   A0A1W4XGI4   A0A1W4XFA6   A0A1W4XG78   D6WD26   A0A1B0DPW0   A0A0M8ZXR3   A0A1Y1N201   A0A0L7QJY2   A0A195DX24   A0A088AW27   A0A151X8B0   Q17GW0   A0A0M4EUE8   B4K8V8   A0A0Q9X2C1   A0A0Q9X2C8   A0A0Q9X2R4   A0A1B6J7D3   A0A0Q9X2A6   A0A0Q9X2C6   A0A151IB93   A0A195EZX7   A0A0Q9WRW6   A0A195BYB7   A0A0Q9WR64   B0W9C1   B4LWK9   A0A0Q9XCE9   A0A0Q9WFZ3   A0A0Q9X9F9   A0A182W3K0   A0A182KZF6   E9IB12   A0A182TYZ7   Q7Q9Y0   F4W8Z0   A0A182KB97   A0A182M1N0   A0A182N9V8   A0A0Q9WTG7   A0A084WTV5   A0A182Y8N5   A0A182PHX6   A0A182IVF8   B4JUD4   A0A182RE03   A0A182QXJ5   F5HLH5   B4R1S6   W5JDS3   A0A182F909   Q8T0M8   B4II80   B4PPS1   A0A0R1E0X9   A0A0R1E0Y1   A0A1W4VB42   A0A1W4V9R1   A0A1W4VA65   A0A1W4UXG1   A0A0P8YFA5   A0A0P9C9T1   A0A0R3NFB9   B3LZV5   A0A0R3NFS6   A0A1W4UXF6   B3P333   Q29AX3   A0A0R3NLT8   A0A0R3NFA6   B7Z0N3   A4V362   A0A0P8YMP5   A0A0R1E6H3   A0A1I8M7J4   A0A1I8M7J6   A0A1W4VB37   A0A1I8M7J5   A0A1W4V9Q6   I5AN85   A0A0P8XYY0   A0A0P8XZU6  

Pubmed

19121390    28756777    26354079    22118469    26227816    20566863    + More
18362917    19820115    28004739    17510324    17994087    18057021    20966253    21282665    12364791    21719571    24438588    25244985    20920257    23761445    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    15632085    25315136    23185243   

EMBL

BABH01026038    BABH01026039    BABH01026040    NWSH01000685    PCG74791.1    KZ149893    + More
PZC78937.1    ODYU01011004    SOQ56473.1    KQ459011    KPJ04330.1    AGBW02010219    OWR48900.1    JTDY01000294    KOB77849.1    KQ460647    KPJ13184.1    NEVH01017470    PNF24202.1    ACPB03021026    DS235088    EEB11586.1    GEDC01012871    JAS24427.1    KQ434813    KZC06781.1    KQ971311    EEZ98811.1    AJVK01018638    AJVK01018639    KQ435824    KOX72226.1    GEZM01015910    JAV91428.1    KQ415041    KOC58875.1    KQ980167    KYN17386.1    KQ982422    KYQ56603.1    CH477255    EAT45895.1    CP012526    ALC46705.1    CH933806    EDW16555.1    KRG02192.1    KRG02187.1    KRG02189.1    GECU01012632    JAS95074.1    KRG02191.1    KRG02188.1    KQ978112    KYM96930.1    KQ981891    KYN33778.1    CH940650    KRF83406.1    KQ976394    KYM93300.1    KRF83407.1    DS231863    EDS39981.1    EDW67674.2    KRG02185.1    KRG02190.1    KRF83405.1    KRG02186.1    GL762091    EFZ22242.1    AAAB01008898    EAA09180.5    GL887974    EGI69349.1    AXCM01000198    KRF83408.1    ATLV01026919    KE525420    KFB53649.1    CH916374    EDV91104.1    AXCN02001201    EGK97194.1    CM000364    EDX12185.1    ADMH02001667    ETN61498.1    AY069167    AE014297    AAL39312.1    AAN14366.1    CH480842    EDW49624.1    CM000160    EDW96171.2    KRK02955.1    KRK02956.1    CH902617    KPU80082.1    KPU80080.1    CM000070    KRS99848.1    EDV43099.1    KRS99849.1    CH954181    EDV48347.1    EAL27226.2    KRS99845.1    KRS99847.1    ACL83545.1    ACL83546.1    AAF55801.3    KPU80079.1    KRK02950.1    KRK02951.1    KRK02952.1    KRK02953.1    KRK02954.1    KRK02957.1    EIM52420.2    KRS99846.1    KPU80078.1    KPU80077.1    KPU80081.1    KPU80083.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000037510    UP000053240    + More
UP000235965    UP000015103    UP000009046    UP000192223    UP000076502    UP000007266    UP000092462    UP000053105    UP000053825    UP000078492    UP000005203    UP000075809    UP000008820    UP000092553    UP000009192    UP000078542    UP000078541    UP000008792    UP000078540    UP000002320    UP000075920    UP000075882    UP000075902    UP000007062    UP000007755    UP000075881    UP000075883    UP000075884    UP000030765    UP000076408    UP000075885    UP000075880    UP000001070    UP000075900    UP000075886    UP000000304    UP000000673    UP000069272    UP000000803    UP000001292    UP000002282    UP000192221    UP000007801    UP000001819    UP000008711    UP000095301   

PRIDE

H9J9S8    Q8T0M8    B7Z0N3   

Pfam

PF06027   SLC35F

Interpro

IPR026505   Solute_c_fam_35_mem_F3/F4        + More
IPR009262   SLC35_F1/F2/F6       

ProteinModelPortal

H9J9S8   A0A2A4JS09   A0A2W1C097   A0A2H1WTU3   A0A194QHB9   A0A212F592   + More
A0A0L7LR13   A0A194R6N9   A0A2J7Q6J6   T1HA72   E0VDY0   A0A1B6DFH4   A0A1W4XFB1   A0A1W4X5S9   A0A1W4XG83   A0A154P4H4   A0A1W4XGI4   A0A1W4XFA6   A0A1W4XG78   D6WD26   A0A1B0DPW0   A0A0M8ZXR3   A0A1Y1N201   A0A0L7QJY2   A0A195DX24   A0A088AW27   A0A151X8B0   Q17GW0   A0A0M4EUE8   B4K8V8   A0A0Q9X2C1   A0A0Q9X2C8   A0A0Q9X2R4   A0A1B6J7D3   A0A0Q9X2A6   A0A0Q9X2C6   A0A151IB93   A0A195EZX7   A0A0Q9WRW6   A0A195BYB7   A0A0Q9WR64   B0W9C1   B4LWK9   A0A0Q9XCE9   A0A0Q9WFZ3   A0A0Q9X9F9   A0A182W3K0   A0A182KZF6   E9IB12   A0A182TYZ7   Q7Q9Y0   F4W8Z0   A0A182KB97   A0A182M1N0   A0A182N9V8   A0A0Q9WTG7   A0A084WTV5   A0A182Y8N5   A0A182PHX6   A0A182IVF8   B4JUD4   A0A182RE03   A0A182QXJ5   F5HLH5   B4R1S6   W5JDS3   A0A182F909   Q8T0M8   B4II80   B4PPS1   A0A0R1E0X9   A0A0R1E0Y1   A0A1W4VB42   A0A1W4V9R1   A0A1W4VA65   A0A1W4UXG1   A0A0P8YFA5   A0A0P9C9T1   A0A0R3NFB9   B3LZV5   A0A0R3NFS6   A0A1W4UXF6   B3P333   Q29AX3   A0A0R3NLT8   A0A0R3NFA6   B7Z0N3   A4V362   A0A0P8YMP5   A0A0R1E6H3   A0A1I8M7J4   A0A1I8M7J6   A0A1W4VB37   A0A1I8M7J5   A0A1W4V9Q6   I5AN85   A0A0P8XYY0   A0A0P8XZU6  

KEGG

101746697    K15288 solute carrier family 35, member F3/4 | (RefSeq) putative thiamine transporter SLC35F3

GO

GO:0016021   GO:0022857  

PANTHER

PTHR19346  

Length:

337

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

126.92806

Exp number, first 60 AAs:

0

Total prob of N-in:

0.98405

inside

1  -  108

TMhelix

109  -  126

outside

127  -  173

TMhelix

174  -  196

inside

197  -  223

TMhelix

224  -  243

outside

244  -  247

TMhelix

248  -  270

inside

271  -  276

TMhelix

277  -  296

outside

297  -  300

TMhelix

301  -  323

inside

324  -  337

 

 

Pi

19.297904

Theta

19.917016

Tajima's D

-0.49906

CLR

1.302871

CSRT

0.24378781060947

Interpretation

Uncertain