Gene

KWMTBOMO03611

Annotation

PREDICTED:_putative_thiamine_transporter_SLC35F3_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr6(-):13507542-13510930      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.025

CDS

ATGCCGTGGATATACCTGCTGGTTGCGAGCTTCGCTTTACTCGTTTTCCATTTGGTATTCCAGTTCGGAAACATAATAACTTACAATATATTCGTTTCGCTCGCACTCATCACAGCGGTACCTGTCTCGGCGGCGCTCGACGTGGTGCTGTACGGGGTCGAGTTCGAAGGTATGAAGCTGGCCGGGATCGTGCTCATCGTTGTGGGCTTCTTCCTCGTCATGCTCCCGGACAACTGGCCCGATTACATCATGAGGCTCTTGAGATGGTCCCGGCGGCGCCAGCGCGGAGGAGGCGGCTCGTCCCGCGGGCGCGACGCCACCGACTACCGCACCGGGTACATCCGCTCGCACCTGCGCTCGCCGTCCGGCCGCGTGCGGTGA

Protein

MPWIYLLVASFALLVFHLVFQFGNIITYNIFVSLALITAVPVSAALDVVLYGVEFEGMKLAGIVLIVVGFFLVMLPDNWPDYIMRLLRWSRRRQRGGGGSSRGRDATDYRTGYIRSHLRSPSGRVR

Uniprot

A0A2A4JS09   A0A2W1C097   A0A2H1WTU3   A0A194QHB9   Q17GW0   A0A1J1I765   + More
H9J9S8   F3YDP4   A0A1I8M7J5   A0A1B6LZI2   A0A1W4XFA6   A0A067QHZ8   V9IDG3   E2B6B2   A0A1B6DFH4   F4W8Z0   A0A026WTM2   A0A0P8YFA5   A0A0P9C9T1   A0A3B0JLI6   A0A0Q9X2A6   A0A0Q9WFZ3   A0A0R3NLT8   A0A0R1E0X9   B4PPS1   A0A1W4V9R1   A0A1B6J6J5   A0A0R3NFS6   A0A158NP34   A0A0M8ZXR3   J9K4N3   A0A0P5LHK6   A0A0P5KWN7   A0A0P5MC29   A0A0N8CP01   A0A0P4YEY1   A0A0P6BD69   A0A0P6GUP4   A0A0P6E846   A0A0P6HNU1   A0A154P4H4  

Pubmed

28756777    26354079    17510324    19121390    25315136    24845553    + More
20798317    21719571    24508170    17994087    15632085    17550304    21347285   

EMBL

NWSH01000685    PCG74791.1    KZ149893    PZC78937.1    ODYU01011004    SOQ56473.1    + More
KQ459011    KPJ04330.1    CH477255    EAT45895.1    CVRI01000040    CRK94790.1    BABH01026038    BABH01026039    BABH01026040    BT126405    AED98586.1    GEBQ01010884    JAT29093.1    KK853582    KDR06510.1    JR038680    AEY58369.1    GL445930    EFN88805.1    GEDC01012871    JAS24427.1    GL887974    EGI69349.1    KK107126    EZA58449.1    CH902617    KPU80082.1    KPU80080.1    OUUW01000007    SPP83095.1    CH933806    KRG02191.1    CH940650    KRF83405.1    CM000070    KRS99845.1    CM000160    KRK02955.1    EDW96171.2    GECU01029721    GECU01012913    JAS77985.1    JAS94793.1    KRS99849.1    ADTU01021996    ADTU01021997    ADTU01021998    KQ435824    KOX72226.1    ABLF02022684    GDIQ01180406    JAK71319.1    GDIQ01179012    JAK72713.1    GDIQ01181712    JAK70013.1    GDIP01113039    LRGB01000626    JAL90675.1    KZS17464.1    GDIP01228478    JAI94923.1    GDIP01016313    JAM87402.1    GDIQ01029368    JAN65369.1    GDIQ01066347    JAN28390.1    GDIQ01015745    JAN78992.1    KQ434813    KZC06781.1   

Proteomes

UP000218220    UP000053268    UP000008820    UP000183832    UP000005204    UP000095301    + More
UP000192223    UP000027135    UP000008237    UP000007755    UP000053097    UP000007801    UP000268350    UP000009192    UP000008792    UP000001819    UP000002282    UP000192221    UP000005205    UP000053105    UP000007819    UP000076858    UP000076502   

PRIDE

H9J9S8   

Pfam

PF00628   PHD        + More
PF14051   Requiem_N
PF06027   SLC35F

Interpro

IPR026505   Solute_c_fam_35_mem_F3/F4        + More
IPR020846   MFS_dom       
IPR011011   Znf_FYVE_PHD       
IPR019787   Znf_PHD-finger       
IPR001965   Znf_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR025750   Requiem/DPF_N_dom       
IPR009262   SLC35_F1/F2/F6       

SUPFAM

SSF57903   SSF57903       

Gene 3D

3.30.40.10    

CDD

cd06174  MFS

ProteinModelPortal

A0A2A4JS09   A0A2W1C097   A0A2H1WTU3   A0A194QHB9   Q17GW0   A0A1J1I765   + More
H9J9S8   F3YDP4   A0A1I8M7J5   A0A1B6LZI2   A0A1W4XFA6   A0A067QHZ8   V9IDG3   E2B6B2   A0A1B6DFH4   F4W8Z0   A0A026WTM2   A0A0P8YFA5   A0A0P9C9T1   A0A3B0JLI6   A0A0Q9X2A6   A0A0Q9WFZ3   A0A0R3NLT8   A0A0R1E0X9   B4PPS1   A0A1W4V9R1   A0A1B6J6J5   A0A0R3NFS6   A0A158NP34   A0A0M8ZXR3   J9K4N3   A0A0P5LHK6   A0A0P5KWN7   A0A0P5MC29   A0A0N8CP01   A0A0P4YEY1   A0A0P6BD69   A0A0P6GUP4   A0A0P6E846   A0A0P6HNU1   A0A154P4H4  

KEGG

101746697    K15288 solute carrier family 35, member F3/4 | (RefSeq) putative thiamine transporter SLC35F3

GO

GO:0016021   GO:0046872   GO:0022857  

PANTHER

PTHR19346  

Length:

126

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

64.16827

Exp number, first 60 AAs:

45.28686

Total prob of N-in:

0.22099

POSSIBLE N-term signal

sequence

outside

1  -  3

TMhelix

4  -  26

inside

27  -  30

TMhelix

31  -  53

outside

54  -  57

TMhelix

58  -  75

inside

76  -  126

 

 

Pi

22.55658

Theta

21.864189

Tajima's D

0.143609

CLR

0.602635

CSRT

0.409579521023949

Interpretation

Uncertain