Gene

KWMTBOMO03598

Pre Gene Modal

BGIBMGA006275

Annotation

PREDICTED:_28S_ribosomal_protein_S24?_mitochondrial_[Amyelois_transitella]

Location

Bomo_Chr6(-):13301962-13303570      View in EpiBrowser

Full name

28S ribosomal protein S24, mitochondrial      

Location in the cell

Mitochondrial   Reliability : 1.593 PlasmaMembrane   Reliability : 1.299

CDS

ATGAATACTTCTGTAGCGAAGCTAGCTCAGATTAGTTTTCGGTCAATTAATTTTACGGTCCAAGGGACTCCGGTTTTGGCGTCTGAATTACATACGTCTGCTCCACTATGCAGGGTTGTATCTGGAAAGTACAGAATTACGAAGAAACGCGACAAACCATTAACGTACGAAATGGCAAATCCACCTCATTACATCGCTCATCGCAAATCCTGGAATTCGTGGAATACTTCGAGTTTGAAAGATGGTCTCCGCAGATCAGAAACAGCCGTGGAAGACGAATTCATTAGAAGATTTATGACAGGCACCTGGCATGGACTTGTTTGTAGCGAGGTTATAATAAAACGTCAGTTCAACCATATAAGGGTAGCAGCAATAATGAGGCGAGCGGTTTCACCGACAAAAATGTATTTCTTACTGGGTTACACTGAGGAATTACTTGCAAATTGGTTACAGTGCCCTGTAACACTCGAGCTTCAAACTGTCGATAGTTTCAAGGATGTCGTGTTTAAGTACATTTAA

Protein

MNTSVAKLAQISFRSINFTVQGTPVLASELHTSAPLCRVVSGKYRITKKRDKPLTYEMANPPHYIAHRKSWNSWNTSSLKDGLRRSETAVEDEFIRRFMTGTWHGLVCSEVIIKRQFNHIRVAAIMRRAVSPTKMYFLLGYTEELLANWLQCPVTLELQTVDSFKDVVFKYI

Subunit

Component of the mitochondrial ribosome small subunit (28S) which comprises a 12S rRNA and about 30 distinct proteins.

Similarity

Belongs to the universal ribosomal protein uS3 family.

Keywords

Complete proteome   Mitochondrion   Reference proteome   Ribonucleoprotein   Ribosomal protein   Transit peptide  

Feature

chain  28S ribosomal protein S24, mitochondrial

Uniprot

A0A2H1WK49   A0A2A4JRY3   A0A2W1BVE4   A0A1E1W6D8   A0A194QBL7   A0A194R7H9   + More
B4NHU5   B4JIF3   B4MBX8   A0A1W4V5C4   A0A0L0CNV3   A0A0M4EHR5   A0A0L7L6I6   B3M0L0   B4K7E9   A0A1B2AKB3   Q9VCC3   B4QSH7   B4HGJ3   B3P782   B4PL07   Q298J3   B4G405   H0RN93   A0A034VFH6   A0A0C9R5L3   A0A3B0K401   A0A1I8MX40   W8BGM6   A0A0K8TW64   A0A023EG92   A0A1I8NRN9   A0A182GYR0   U5EH64   Q16KP2   A0A1B0BJM3   Q16KP1   B0WDK9   A0A1Q3FCC4   A0A1S4FXM5   A0A1A9X1A9   T1DSL1   A0A182VAA3   Q7PU90   A0A162NIF7   A0A182FAE9   A0A0P5T5B4   A0A182XF62   F5HLM9   A0A182HVN3   A0A0P5D1Q3   A0A0P5LKI6   A0A2M4C1Y3   A0A0P5QBN2   A0A0P6FR26   A0A0P6BZ07   A0A0P5F5F3   A0A0P5A048   A0A182NCU4   A0A182Y912   A0A2M3ZJY0   A0A084W3E0   A0A2M4AW47   A0A182QT79   A0A182RI30   A0A1A9VQZ4   E9IWV8   A0A182SIY7   A0A1A9XI17   A0A182PLG5   A0A212END4   A0A182K7N5   A0A182MH07   A0A0T6B6R2   A0A1Y1MLV2   E9G5I6   W5JTK6   A0A1A9ZLB3   A0A182W379   A0A1B0G881   A0A182J338   A0A158NFV2   A0A1L8E0J3   A0A3L8DP64   A0A2P8XZZ5   A0A067RP07   A0A2J7RS29   D6X4F5   A0A195B2K3   A0A1B0GJU3   A0A151XC52   C6TP37   A0A1B6I5Y3   J3JWQ3   A0A1S3D008   A0A023FHG5   A0A1B6CNS6   A0A195E7Q8  

Pubmed

28756777    26354079    17994087    26108605    26227816    10731132    + More
12537572    17550304    15632085    25348373    25315136    24495485    24945155    26483478    17510324    9087549    12364791    14747013    17210077    25244985    24438588    21282665    22118469    28004739    21292972    20920257    23761445    21347285    30249741    29403074    24845553    18362917    19820115    22516182    23537049   

EMBL

ODYU01009196    SOQ53451.1    NWSH01000685    PCG74795.1    KZ149893    PZC78949.1    + More
GDQN01008508    JAT82546.1    KQ459249    KPJ02385.1    KQ460647    KPJ13195.1    CH964272    EDW84705.1    CH916369    EDV93034.1    CH940656    EDW58599.1    JRES01000116    KNC34033.1    CP012526    ALC45984.1    JTDY01002686    KOB70921.1    CH902617    EDV44257.1    CH933806    EDW14273.1    KX531785    ANY27595.1    AE014297    CM000364    EDX14176.1    CH480815    EDW43446.1    CH954182    EDV53902.1    CM000160    EDW98992.1    CM000070    EAL27962.2    CH479179    EDW24416.1    BT132815    AEU04564.1    GAKP01018090    JAC40862.1    GBYB01002111    JAG71878.1    OUUW01000007    SPP82700.1    GAMC01017739    GAMC01017736    GAMC01017731    JAB88819.1    GDHF01033617    GDHF01018482    JAI18697.1    JAI33832.1    GAPW01005231    JAC08367.1    JXUM01098064    KQ564392    KXJ72347.1    GANO01003163    JAB56708.1    CH477947    EAT34873.1    JXJN01015468    EAT34874.1    DS231898    EDS44618.1    GFDL01009819    JAV25226.1    GAMD01001429    JAB00162.1    AAAB01001196    EAA01932.4    LRGB01000568    KZS18008.1    GDIP01137363    JAL66351.1    AAAB01008898    EGK97162.1    APCN01005808    GDIP01167653    JAJ55749.1    GDIQ01169610    JAK82115.1    GGFJ01010154    MBW59295.1    GDIQ01116959    JAL34767.1    GDIQ01061680    JAN33057.1    GDIP01008390    JAM95325.1    GDIQ01259780    JAJ91944.1    GDIP01218702    JAJ04700.1    GGFM01008019    MBW28770.1    ATLV01019936    KE525286    KFB44734.1    GGFK01011670    MBW44991.1    AXCN02001206    GL766614    EFZ14954.1    AGBW02013676    OWR42993.1    AXCM01000106    LJIG01009454    KRT83048.1    GEZM01030643    GEZM01030642    GEZM01030641    GEZM01030638    JAV85455.1    GL732532    EFX85215.1    ADMH02000180    ETN67456.1    CCAG010000200    ADTU01014794    GFDF01001992    JAV12092.1    QOIP01000006    RLU22191.1    PYGN01001102    PSN37573.1    KK852553    KDR21474.1    NEVH01000595    PNF43643.1    KQ971410    EEZ97275.1    KQ976662    KYM78522.1    AJWK01022384    KQ982314    KYQ57935.1    BT099523    ACU30162.1    GECU01025406    JAS82300.1    BT127671    KB632290    AEE62633.1    ERL91562.1    GBBK01004013    JAC20469.1    GEDC01022220    JAS15078.1    KQ979568    KYN20859.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000007798    UP000001070    UP000008792    + More
UP000192221    UP000037069    UP000092553    UP000037510    UP000007801    UP000009192    UP000000803    UP000000304    UP000001292    UP000008711    UP000002282    UP000001819    UP000008744    UP000268350    UP000095301    UP000095300    UP000069940    UP000249989    UP000008820    UP000092460    UP000002320    UP000091820    UP000075903    UP000007062    UP000076858    UP000069272    UP000076407    UP000075840    UP000075884    UP000076408    UP000030765    UP000075886    UP000075900    UP000078200    UP000075901    UP000092443    UP000075885    UP000007151    UP000075881    UP000075883    UP000000305    UP000000673    UP000092445    UP000075920    UP000092444    UP000075880    UP000005205    UP000279307    UP000245037    UP000027135    UP000235965    UP000007266    UP000078540    UP000092461    UP000075809    UP000030742    UP000079169    UP000078492   

PRIDE

Q9VCC3    H0RN93   

Pfam

PF14955   MRP-S24

Interpro

IPR026146   MRPS24       

ProteinModelPortal

A0A2H1WK49   A0A2A4JRY3   A0A2W1BVE4   A0A1E1W6D8   A0A194QBL7   A0A194R7H9   + More
B4NHU5   B4JIF3   B4MBX8   A0A1W4V5C4   A0A0L0CNV3   A0A0M4EHR5   A0A0L7L6I6   B3M0L0   B4K7E9   A0A1B2AKB3   Q9VCC3   B4QSH7   B4HGJ3   B3P782   B4PL07   Q298J3   B4G405   H0RN93   A0A034VFH6   A0A0C9R5L3   A0A3B0K401   A0A1I8MX40   W8BGM6   A0A0K8TW64   A0A023EG92   A0A1I8NRN9   A0A182GYR0   U5EH64   Q16KP2   A0A1B0BJM3   Q16KP1   B0WDK9   A0A1Q3FCC4   A0A1S4FXM5   A0A1A9X1A9   T1DSL1   A0A182VAA3   Q7PU90   A0A162NIF7   A0A182FAE9   A0A0P5T5B4   A0A182XF62   F5HLM9   A0A182HVN3   A0A0P5D1Q3   A0A0P5LKI6   A0A2M4C1Y3   A0A0P5QBN2   A0A0P6FR26   A0A0P6BZ07   A0A0P5F5F3   A0A0P5A048   A0A182NCU4   A0A182Y912   A0A2M3ZJY0   A0A084W3E0   A0A2M4AW47   A0A182QT79   A0A182RI30   A0A1A9VQZ4   E9IWV8   A0A182SIY7   A0A1A9XI17   A0A182PLG5   A0A212END4   A0A182K7N5   A0A182MH07   A0A0T6B6R2   A0A1Y1MLV2   E9G5I6   W5JTK6   A0A1A9ZLB3   A0A182W379   A0A1B0G881   A0A182J338   A0A158NFV2   A0A1L8E0J3   A0A3L8DP64   A0A2P8XZZ5   A0A067RP07   A0A2J7RS29   D6X4F5   A0A195B2K3   A0A1B0GJU3   A0A151XC52   C6TP37   A0A1B6I5Y3   J3JWQ3   A0A1S3D008   A0A023FHG5   A0A1B6CNS6   A0A195E7Q8  

PDB

6GAZ     E-value=1.41978e-30,     Score=327

KEGG

101740908    K17403 small subunit ribosomal protein S24 | (RefSeq) 28S ribosomal protein S24, mitochondrial

GO

GO:0005739   GO:0005840   GO:0032543   GO:0003735   GO:0005763   GO:0006412   GO:0015074   GO:0004591   GO:0006099   GO:0030976   GO:0051103   GO:0005524   GO:0008270   GO:0042555   GO:0048384  

PANTHER

PTHR21244  

Subcellular location

Mitochondrion  

Length:

172

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.25586

Exp number, first 60 AAs:

0.14603

Total prob of N-in:

0.25236

outside

1  -  172

 

 

Pi

333.76292

Theta

246.468351

Tajima's D

1.190809

CLR

0.001065

CSRT

0.707464626768662

Interpretation

Uncertain