Silkworm Genome Informatics Database

Gene

KWMTBOMO03593

Pre Gene Modal

BGIBMGA006315

Annotation

Uncharacterized_protein_OBRU01_01059_[Operophtera_brumata]

Location

Bomo_Chr6(+):13122222-13123981 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.993

CDS

ATGAGTCCGGGCGAGCGCGCCGCCCTAGGGCGCCGCGAACCCGCTCGCCCTCAGTATGCCAACACAGCTCCGGGTTTCCCGCCACCCTACTATCCGCCCTATGGTGTGCCGCACCCGAGTGCGTGGCTCGGCGCCCCTCTCATATCGATGGCCGGTCGTGCACCAGCACAATCCCGGAATACACCTGTTTCGAAGTTGGCTATGCAAGCGCAGGGAGCACCACTAATTATACAAAACAGAAAAAAGTTCAACATCGGATTCGATCAACGCAACCAGCGGACACAACAAGGCCATACAGAAAATGTGCAACGAGACAGGTGTGAACTTACTGACGGAAACAGGGCGCGAAACCAGCAACAGCAAACGCGTTCTGCGCGAGGCGGACGTAACAACAACACGGATGCGGTCAGTATCGCGAGCGATGAAAGTTCCGGCTCCGCTAACTCAGAAACCATGCTACCCAGGATAATAAAACCAAGAAAACGACGTAAAAAGGATAGGAAGCCGAACAACATCGTACCGCACGATTTAACGACTACTTTAGATCTCGGCGAAGTTGATCATTGTGCGGTTTCAAGCATAGGGACGCACGGCATTTATGATGAAACTTATTGTCGCGATATGTCTTTACCGTATCGCTTAGATGTCAAAGTACTGGAGTATCCGGAACCGGCACCGACCCCGTATCGAGTAACAGCACTCGGAGAGGCATTAGAAGCCACTCGTTTTGGTATAACCGAGGCTGTTTCACCAGCAGAATCCGCAGTTAGTTCGTGTCAGTGTCGGCTTTGCGACCCCGTTGGACAAATTTGGGATGCAGATTCCATTGCTGATCTACTAGATGAAAATTCTAGTGGTGATTTCACACCTACAAAGCTCGAAGATTCTATGAAAGTAGTCGGACCACTAGGACGACGAGGTGCTGATACAACGTTGCGAAGAAGTTGGAGCGATCCGTCATCTCGGGTCCCTGAAAGACGTGACATCGGCAACAGCGATAATTATTCAGCACCTAATTTGTATTCGTTATTCCCACCGGCCAGACAAGCCAGTTCACCAGAACCTCGATCACCTTTGGCGCTGGAAATATCTTCGGAAATTGTTACGTCCATGAATGGTCACCGCGACTTGGAAATAAAGCTATTCTCGACCTCGCCCCCGGCTATGAACTCCGACCGACGCTCCTTTTTCGCAGATAAAAGTGAAAGTGCCGTGAACAGATGTACAGTCGAGCGCTACGATTTCAAAGTGAACAGTGCTGTGAATAACGAATTCGATTCATGTGTCAAAGTTGATAAGCAAAAGAGTGATGTGTCAGACGAGGGTTGTTCAGTGGCACTGATGAACGGCAAACCCTCACGCAACATTTGTGATCTAAACTTAGTTTCTGTGTGA

Protein

MSPGERAALGRREPARPQYANTAPGFPPPYYPPYGVPHPSAWLGAPLISMAGRAPAQSRNTPVSKLAMQAQGAPLIIQNRKKFNIGFDQRNQRTQQGHTENVQRDRCELTDGNRARNQQQQTRSARGGRNNNTDAVSIASDESSGSANSETMLPRIIKPRKRRKKDRKPNNIVPHDLTTTLDLGEVDHCAVSSIGTHGIYDETYCRDMSLPYRLDVKVLEYPEPAPTPYRVTALGEALEATRFGITEAVSPAESAVSSCQCRLCDPVGQIWDADSIADLLDENSSGDFTPTKLEDSMKVVGPLGRRGADTTLRRSWSDPSSRVPERRDIGNSDNYSAPNLYSLFPPARQASSPEPRSPLALEISSEIVTSMNGHRDLEIKLFSTSPPAMNSDRRSFFADKSESAVNRCTVERYDFKVNSAVNNEFDSCVKVDKQKSDVSDEGCSVALMNGKPSRNICDLNLVSV

Uniprot

H9J9X0 A0A2W1BV40 A0A2A4JXS3 A0A2H1WPU6 A0A0L7LUL5 A0A194QA34 + More
A0A194R6A3 A0A212ENB0 A0A139WMR9 A0A139WMX1

Pubmed

19121390 28756777 26227816 26354079 22118469 18362917 + More
19820115

EMBL

BABH01026004 KZ149893 PZC78952.1 NWSH01000409 PCG76609.1 ODYU01010110 + More
SOQ54982.1 JTDY01000061 KOB79099.1 KQ459249 KPJ02388.1 KQ460647 KPJ13197.1 AGBW02013676 OWR42995.1 KQ971312 KYB29329.1 KYB29330.1

Proteomes

UP000005204 UP000218220 UP000037510 UP000053268 UP000053240 UP000007151 + More
UP000007266

PRIDE

H9J9X0

Pfam

PF13855 LRR_8 + More
PF03372 Exo_endo_phos

Interpro

IPR032675   LRR_dom_sf        + More
IPR001611   Leu-rich_rpt
IPR005135   Endo/exonuclease/phosphatase
IPR036691   Endo/exonu/phosph_ase_sf
IPR003591   Leu-rich_rpt_typical-subtyp

SUPFAM

SSF56219 SSF56219

Gene 3D

3.60.10.10 3.80.10.10

ProteinModelPortal

H9J9X0 A0A2W1BV40 A0A2A4JXS3 A0A2H1WPU6 A0A0L7LUL5 A0A194QA34 + More
A0A194R6A3 A0A212ENB0 A0A139WMR9 A0A139WMX1

KEGG

101740768 no KO assigned | (RefSeq) uncharacterized LOC101740768

GO

GO:0030014 GO:0005634 GO:0005737 GO:0000175 GO:0004535 GO:0000289

Length:

464

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00193

Exp number, first 60 AAs:

0.00193

Total prob of N-in:

0.00105

outside

1 - 464

Pi

152.385274

Theta

169.528874

Tajima's D

-0.217388

CLR

0

CSRT

0.313584320783961

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics