Gene

KWMTBOMO03592

Annotation

PREDICTED:_uncharacterized_protein_LOC106708887_[Papilio_machaon]

Location

Bomo_Chr6(-):13109213-13112731      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.623 PlasmaMembrane   Reliability : 1.46

CDS

ATGCTTTGGTTGACAGAACGGATAGGGATGCGGCATTGCTCGATAGGGCATGTATTGTTGGGTCCTGCGTTCCGGCCGGTCGCTGCGAGGAAATCGGACAATTTTCTGGTCGGGTCTACGCTTTCGGAAGTAGTCCAACGGTTTTGGGAACTAGAAGAACCTCCTACAGCTTATCGAGTTAACCCGGATGAGGAGGAATGTGAGCTGTTTTACCAGAATAATACGGGTCGTCTCTATTCGGGCCGGTTCTTGTTAAGACTTCCTTTTCGGGCGAATCGCCCACTGCTAGGCAGTTCGAGGAAGGCAGCAGAGACTAGACTTTTGTCAATGGAGAGACGCATGAGGCGCGACGCGGTGTTCCGTCAGAAATATGTAGAGTTTATGCGGGAGTATGAATCCTTAGGTCACATGTCGGTTTCCAAGGTAGATTGGAGTGCTACGGAGCACTGTTTCCTGCCTCATCATGCGGTTTTGAAAACTCCTAACGGTAAAATTAGGGTCGTGTTTGACGGTTCGGTTACGACCTCCTCCGGCGTCTCGTTAAATCAGTGTCTCCATTCGGGTCCAAAGCTGAACCGGGACATTTCAGACATACTGACGAGCTTCCGCAGGCACCAGATCGTTTTCGTGGCAGACATCCGAATGATGTTCAGGCAAACGGTGATTCATCCGGAGGATAGGCGGTATCAACTCATTCTCTGGCGTGAAAGCTCAGATGAGCCCATAAAAATTTATGAACTGAACACGAACACTTACGGGTTGCGGTCGAGTCCATATTTGGCGGTTCGTTCTTTGCGGGAGCTGGCAGTGAGGGAACGGTTGCACTACCCTCGTGCTGCGGACATTTTGGAACGGGACCTATATGTCGATGACGTATGTACGGGCGCCGACAGTGTCGAAGAGGCCTTATCACGCAAGGATGAACTGATCCGCCTTTTGAGCAGGGGCGGGTACGAGTTGAGAAAATGGCTGTCTAACTGTCCTGAGTTGTTGACTGGTTTGCCAACGGAGTTTCAACAGGATCCCCATCTTTTCGAGAATGTCGATAACCCTAACATGCTGTCGGTCCTAGGGATTCAATATCGTCCGATTCAAGATGAATTTACCTATCGGGTGGAGTTGGAAAATCCAAAGGTATGGTCTAAGCGAACGGTGCTTTCCACAATTGCTCGAACCTTCGATCCAAACGGTTGGATCGCTCCTGTCACTTTTCTCTTAAAGTGCTTCATGCAGCGACTGTGGTCTGCTAACCTGTCATGGGACGAGGGGATTGCTGGTGACCTATTGAAGGATTGGTTGAACTTTTTCTCGTCTCTTCCTGATATTAACCACGTGTCAATACCTCGGAAGCTGGTTCCTGCGGGCAAATACAAGGCGTCTCTCCACGGGTTTTCGGATGCCTCGGAACGCGGATTCGCAGCTGCGGTATACTTGCGAACGGTTTCTTCAACTGGAAGGGTTGATATACGGTTGGTGTTAGCTAAGAGTAAGGTCGCTCCGCTTCGGACACGCATGACCATTCCGAAGCTCGAGTTGTCTGGTGCCGCTCTACTGACTAGGTTGTTAAACCATACAGCTACTAGTTTACGGTCGGTTATTGATTTAGAAAACACTGTGTATGCTTGGACAGACAGCCAGATAGTGTTGTGCTGGTTGAAGGCTTCGGTTCATACACTTGAAGTTTTCGTGGCCAACCGTGTCTCCCAGATTCAAGGATCTGAGGTCCCTCTAACATGGAGACACGTGCCTGGTGAGCTCAATCCGGCGGACTGCGCTTCTCGGGGATGCTTAGCATCGGAAATAGTTGATCATCAGTTATGGTGGGGTCCCCAGTGGCTCACAATGAAGGCTTCTCAGTGGCCACCCTCTCGCATAGGAGTTCCTCCAGGTCTCGTGGCTGCACCGGCGCAGTTCCAGGATCGAGGAGTGATTCAGGGGTTGGATTTGGATCTGCTCATCAACCGTTATAGCTCCTTGGACAAGCTGGTTAAGGTTACCGCCTGGATTTTGAGGTTTATTCGGAATTGTCGTTTGTCGGTGTCTCAACGCAATATGACACCTGTTGTGTGTCCCATCGAGCGGAAGAAGGCACTGCTGAAATTAATTGAAGTTGTGCAAGCCACCAGCTTTCATTCAGAATTGAAGGCGCTAAGGACTGAGCGCCCTAAGCTTCGTGGAGCTATCGCTCGTCTAAGCCCCTTTGTAGACGGCCAGGGGTTGATTCGAGTGGGAGGTAGATTAAGTAACTCCAATTTACCTTATTCGGCGCGCCATCCTCTTTTACTTCCCAAGAAGAGCCAGTTAGTTGACCTGTTGGTGATGGATCGCCACATCGCAAATTCGCATTCCGGTTGCAATGCGCTGCTGGCATCCCTCCAGAGGGAATTTTGGATTCTGTCAGGGCGTCGTACGGTTCGGAGCGTCCTTTTCCGGTGTTTACCCTGTTATCGGCTTAAGGCGTCTACGATGCAGCCTCAGATGGGAGATCTGCCTTCAGACAGAGTGAAGAAGATGAGGCCGTTTTCTGGAGTTGGTACGGACTTCGCTGGGCCCTTCATGATCAAGGCTTCACGTTTGCGGAATGTTAGGTTAATTAAGGCTTATCTGTGCGTCTTTGTCTGTCTTTCAACCAAAGCTGTACATCTTGAAGTTGTTGCCGACCTTACAACTGAAGCCTTTATTGCGAGCTTGGATAGATTTGTGTCCCGTCGAGGTTTACCCGAATTGATACGCTCCGATAACGGAACGAATTTTGTAGGTGCGGACCGTTACTTGCGGGATGTAGTAAATTTCTTGAACAATAACCAGGTGGATATTGAAACGGCCCTCTCTCGTCGCGGTATTCGGTGGACCTTCAGTCCTCCAGGATGCCCCCACTGGGGTGGAATTTTCGAGGCAGTAGTAAAATCGGCTAAGACTCACTTGATGCGCGTGATAGGGCAAACCTCGCTCACCTTTGAGGAGTTAACTACGGTATTTTGTAAAATTGAAGCGGTACTTAATTCGCGGCCGTTGTGCCCGCTCAGTTCAGACCCGAATGACTTGGAGTCGTTAACTCCAGGCCATTTCTTGATAGGACAGCCACTCAATGCGTTGCCGGAGTATCCCCTCTCGGATATCAAGCCTGGACGGTTGAGGCGATACCAGATGTTGCAGCAGATGTCCCAAGATTTTTGGAAACGTTGGTCCCTTGAGTATTTACATCTGCTCCAGCAGCGCTTTAAGTGGACGGATAGAACCAGTCCCCCTCACGTCGGTGACCTTGTGTTGGTTAAGGATGCTAACCTGCCGCCACTGCGTTGGCGTAGGGGGCGCATTGTTAATCTGTTTCCCGGTAAGGATGGGACCCCACGGTCTGCAGAGGTTCTGGTCGGGGACTCGGTTCTCAAACGAGCGGTCACAACGTTGTCCCGGCTGCCAGTTGATTAG

Protein

MLWLTERIGMRHCSIGHVLLGPAFRPVAARKSDNFLVGSTLSEVVQRFWELEEPPTAYRVNPDEEECELFYQNNTGRLYSGRFLLRLPFRANRPLLGSSRKAAETRLLSMERRMRRDAVFRQKYVEFMREYESLGHMSVSKVDWSATEHCFLPHHAVLKTPNGKIRVVFDGSVTTSSGVSLNQCLHSGPKLNRDISDILTSFRRHQIVFVADIRMMFRQTVIHPEDRRYQLILWRESSDEPIKIYELNTNTYGLRSSPYLAVRSLRELAVRERLHYPRAADILERDLYVDDVCTGADSVEEALSRKDELIRLLSRGGYELRKWLSNCPELLTGLPTEFQQDPHLFENVDNPNMLSVLGIQYRPIQDEFTYRVELENPKVWSKRTVLSTIARTFDPNGWIAPVTFLLKCFMQRLWSANLSWDEGIAGDLLKDWLNFFSSLPDINHVSIPRKLVPAGKYKASLHGFSDASERGFAAAVYLRTVSSTGRVDIRLVLAKSKVAPLRTRMTIPKLELSGAALLTRLLNHTATSLRSVIDLENTVYAWTDSQIVLCWLKASVHTLEVFVANRVSQIQGSEVPLTWRHVPGELNPADCASRGCLASEIVDHQLWWGPQWLTMKASQWPPSRIGVPPGLVAAPAQFQDRGVIQGLDLDLLINRYSSLDKLVKVTAWILRFIRNCRLSVSQRNMTPVVCPIERKKALLKLIEVVQATSFHSELKALRTERPKLRGAIARLSPFVDGQGLIRVGGRLSNSNLPYSARHPLLLPKKSQLVDLLVMDRHIANSHSGCNALLASLQREFWILSGRRTVRSVLFRCLPCYRLKASTMQPQMGDLPSDRVKKMRPFSGVGTDFAGPFMIKASRLRNVRLIKAYLCVFVCLSTKAVHLEVVADLTTEAFIASLDRFVSRRGLPELIRSDNGTNFVGADRYLRDVVNFLNNNQVDIETALSRRGIRWTFSPPGCPHWGGIFEAVVKSAKTHLMRVIGQTSLTFEELTTVFCKIEAVLNSRPLCPLSSDPNDLESLTPGHFLIGQPLNALPEYPLSDIKPGRLRRYQMLQQMSQDFWKRWSLEYLHLLQQRFKWTDRTSPPHVGDLVLVKDANLPPLRWRRGRIVNLFPGKDGTPRSAEVLVGDSVLKRAVTTLSRLPVD

Uniprot

A0A1B6KZV2   A0A1B6MUZ9   J9JNP4   A0A1Y1KMX0   A0A1U8N896   A0A0J7KBS8   + More
A0A2S2PBK9   A0A226E226   J9JUK4   A0A226DMG9   A0A226D417   A0A182HA33   A0A226CWA5   A0A146M0N4   A0A0A9VSF7   A0A1Y1LIG5   A0A0A9WP39   A0A0A9WE49   A0A1Y1MY22   J9JLG6   J9JKU0   X1WY95   V5GHM7   X1XTX7   X1WTX8   A0A226EUF5   J9LPA9   A0A2S2QLL5   A0A0J7KDN6   A0A2S2P1X6   A0A226EPI5   A0A1Y1LBZ3   X1XU26   A0A0J7KBZ0   X1WYQ8   A0A0J7KB34   A0A0J7KCR4   X1WZF3   A0A0J7K7L1   A0A087T9T6   A0A0J7N536   A0A0J7N5C9   A0A0J7KCB9   A0A0A9VYL4   A0A2S2NNC8   A0A0J7KJY9   A0A0J7N890   A0A2S2NBR8   A0A2S2PI15   A0A0K8SX96   A0A2S2R2J0   A0A0A9XKM2   A0A0J7KCI2   J9JVZ7   J9L9H5   A0A2S2P963   A0A2S2NDE3   J9JUM9   A0A1B6MT91   A0A1B6LLT3   J9JVD6   J9LHB7   A0A2S2NPW7   A0A2S2QWS1   A0A2S2QPS5   A0A224XGH3   A0A2S2NHU0   A0A1Y1L369   A0A226EBC2   A0A0J7N465   A0A0A9Z275   J9JT64   A0A2S2NCY5   A0A146LZC3   A0A0J7KGI8   A0A2S2PUJ2   A0A146M9H0   J9JUA7   A0A023EYK8   A0A2S2PM34   A0A1Y1MTT1   J9K0A1   A0A146LBU6   J9LIW1   X1WZY4   A0A2S2PNZ4   A0A224XG39   A0A2S2NLW5   A0A1S3DMN9   J9L3C9   X1X5R1   A0A2S2PNC2   A0A1W7R6I7   A0A139W8E1   E9J9Y8   J9K351   J9KLD6   A0A2S2PC01   A0A0J7KNK6   A0A226DKA3  

Pubmed

28004739    25893780    26483478    26823975    25401762    25474469    + More
18362917    19820115    21282665   

EMBL

GEBQ01022991    GEBQ01006185    JAT16986.1    JAT33792.1    GEBQ01007199    GEBQ01000222    + More
JAT32778.1    JAT39755.1    ABLF02005684    GEZM01085145    GEZM01085143    JAV60187.1    LBMM01009888    KMQ87813.1    GGMR01014165    MBY26784.1    LNIX01000007    OXA51795.1    ABLF02039606    LNIX01000016    OXA46198.1    LNIX01000036    OXA39969.1    JXUM01030959    KQ560903    KXJ80414.1    LNIX01000069    OXA36894.1    GDHC01006469    JAQ12160.1    GBHO01044317    GBHO01044315    JAF99286.1    JAF99288.1    GEZM01054765    JAV73413.1    GBHO01034065    GBHO01034061    JAG09539.1    JAG09543.1    GBHO01038805    GBHO01038804    GBHO01038801    JAG04799.1    JAG04800.1    JAG04803.1    GEZM01018702    JAV90048.1    ABLF02030698    ABLF02030705    ABLF02030709    ABLF02021785    ABLF02030854    ABLF02067347    GALX01004947    JAB63519.1    ABLF02006304    ABLF02036268    ABLF02054908    LNIX01000002    OXA60848.1    ABLF02035780    GGMS01009443    MBY78646.1    LBMM01009202    KMQ88311.1    GGMR01010723    MBY23342.1    OXA59522.1    GEZM01060254    JAV71154.1    ABLF02001506    ABLF02008029    ABLF02035899    ABLF02037719    ABLF02046327    ABLF02064627    LBMM01009964    KMQ87756.1    ABLF02028666    ABLF02066713    LBMM01010405    KMQ87487.1    LBMM01009551    KMQ88039.1    ABLF02041614    LBMM01012188    KMQ86362.1    KK114194    KFM61875.1    LBMM01009898    KMQ87805.1    LBMM01009746    KMQ87900.1    LBMM01009645    KMQ87967.1    GBHO01044316    JAF99287.1    GGMR01005823    MBY18442.1    LBMM01006490    KMQ90572.1    LBMM01008464    KMQ88855.1    GGMR01002024    MBY14643.1    GGMR01016460    MBY29079.1    GBRD01007977    JAG57844.1    GGMS01014951    MBY84154.1    GBHO01023090    JAG20514.1    LBMM01009688    KMQ87939.1    ABLF02015138    ABLF02008636    ABLF02065931    GGMR01013370    MBY25989.1    GGMR01002187    MBY14806.1    ABLF02004035    ABLF02004036    ABLF02004037    ABLF02004038    ABLF02008018    ABLF02008020    ABLF02012635    ABLF02061171    GEBQ01000825    JAT39152.1    GEBQ01015458    JAT24519.1    ABLF02008594    ABLF02022040    ABLF02056888    GGMR01006575    MBY19194.1    GGMS01012379    MBY81582.1    GGMS01010524    MBY79727.1    GFTR01008866    JAW07560.1    GGMR01003717    MBY16336.1    GEZM01066272    JAV68024.1    LNIX01000005    OXA54454.1    LBMM01010417    KMQ87475.1    GBHO01007689    JAG35915.1    ABLF02023842    ABLF02028949    ABLF02058391    GGMR01002421    MBY15040.1    GDHC01006567    JAQ12062.1    LBMM01007859    KMQ89359.1    GGMR01020500    MBY33119.1    GDHC01002235    JAQ16394.1    ABLF02041650    GBBI01004479    JAC14233.1    GGMR01017890    MBY30509.1    GEZM01021505    JAV88969.1    ABLF02067195    GDHC01014057    JAQ04572.1    ABLF02003736    ABLF02008292    ABLF02008294    ABLF02046909    ABLF02052378    ABLF02036131    ABLF02041527    ABLF02064049    GGMR01018506    MBY31125.1    GFTR01008874    JAW07552.1    GGMR01005535    MBY18154.1    ABLF02006784    GGMR01018294    MBY30913.1    GEHC01000869    JAV46776.1    KQ973442    KXZ75531.1    GL769615    EFZ10365.1    ABLF02025193    ABLF02013940    ABLF02036313    ABLF02066938    ABLF02066950    GGMR01014306    MBY26925.1    LBMM01005079    KMQ91831.1    LNIX01000018    OXA45284.1   

Proteomes

UP000007819    UP000189702    UP000036403    UP000198287    UP000069940    UP000249989    + More
UP000054359    UP000079169    UP000007266   

Pfam

PF03564   DUF1759        + More
PF18701   DUF5641
PF00665   rve
PF05380   Peptidase_A17
PF17921   Integrase_H2C2
PF05585   DUF1758
PF00078   RVT_1
PF17919   RT_RNaseH_2
PF17917   RT_RNaseH
PF09337   zf-H2C2

Interpro

IPR005312   DUF1759        + More
IPR041588   Integrase_H2C2       
IPR036397   RNaseH_sf       
IPR008737   Peptidase_asp_put       
IPR040676   DUF5641       
IPR012337   RNaseH-like_sf       
IPR008042   Retrotrans_Pao       
IPR001584   Integrase_cat-core       
IPR021109   Peptidase_aspartic_dom_sf       
IPR001878   Znf_CCHC       
IPR001995   Peptidase_A2_cat       
IPR001969   Aspartic_peptidase_AS       
IPR000477   RT_dom       
IPR041373   RT_RNaseH       
IPR041577   RT_RNaseH_2       
IPR036875   Znf_CCHC_sf       
IPR000727   T_SNARE_dom       
IPR015416   Znf_H2C2_histone_UAS-bd       

SUPFAM

SSF53098   SSF53098        + More
SSF50630   SSF50630       
SSF57756   SSF57756       

Gene 3D

3.30.420.10     2.40.70.10    

ProteinModelPortal

A0A1B6KZV2   A0A1B6MUZ9   J9JNP4   A0A1Y1KMX0   A0A1U8N896   A0A0J7KBS8   + More
A0A2S2PBK9   A0A226E226   J9JUK4   A0A226DMG9   A0A226D417   A0A182HA33   A0A226CWA5   A0A146M0N4   A0A0A9VSF7   A0A1Y1LIG5   A0A0A9WP39   A0A0A9WE49   A0A1Y1MY22   J9JLG6   J9JKU0   X1WY95   V5GHM7   X1XTX7   X1WTX8   A0A226EUF5   J9LPA9   A0A2S2QLL5   A0A0J7KDN6   A0A2S2P1X6   A0A226EPI5   A0A1Y1LBZ3   X1XU26   A0A0J7KBZ0   X1WYQ8   A0A0J7KB34   A0A0J7KCR4   X1WZF3   A0A0J7K7L1   A0A087T9T6   A0A0J7N536   A0A0J7N5C9   A0A0J7KCB9   A0A0A9VYL4   A0A2S2NNC8   A0A0J7KJY9   A0A0J7N890   A0A2S2NBR8   A0A2S2PI15   A0A0K8SX96   A0A2S2R2J0   A0A0A9XKM2   A0A0J7KCI2   J9JVZ7   J9L9H5   A0A2S2P963   A0A2S2NDE3   J9JUM9   A0A1B6MT91   A0A1B6LLT3   J9JVD6   J9LHB7   A0A2S2NPW7   A0A2S2QWS1   A0A2S2QPS5   A0A224XGH3   A0A2S2NHU0   A0A1Y1L369   A0A226EBC2   A0A0J7N465   A0A0A9Z275   J9JT64   A0A2S2NCY5   A0A146LZC3   A0A0J7KGI8   A0A2S2PUJ2   A0A146M9H0   J9JUA7   A0A023EYK8   A0A2S2PM34   A0A1Y1MTT1   J9K0A1   A0A146LBU6   J9LIW1   X1WZY4   A0A2S2PNZ4   A0A224XG39   A0A2S2NLW5   A0A1S3DMN9   J9L3C9   X1X5R1   A0A2S2PNC2   A0A1W7R6I7   A0A139W8E1   E9J9Y8   J9K351   J9KLD6   A0A2S2PC01   A0A0J7KNK6   A0A226DKA3  

KEGG

105842751    no KO assigned | (RefSeq) uncharacterized LOC105842751

GO

GO:0015074   GO:0003676   GO:0008270   GO:0004190   GO:0016021   GO:0004591   GO:0006099   GO:0030976   GO:0051103   GO:0005524   GO:0042555   GO:0048384  

Length:

1142

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02553

Exp number, first 60 AAs:

0.02169

Total prob of N-in:

0.00118

outside

1  -  1142

 

 

Pi

171.5117

Theta

128.81811

Tajima's D

-0.550508

CLR

0.530318

CSRT

0.229138543072846

Interpretation

Uncertain