Gene

KWMTBOMO03584

Pre Gene Modal

BGIBMGA006279

Annotation

PREDICTED:_sodium_channel_protein_Nach-like_[Bombyx_mori]

Location

Bomo_Chr6(-):13006633-13007801      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 4.036

CDS

ATGCTATTGGTCTGCTGTTTTGGTTCGACAGCAGTTCTTAAAGCGACGCTGGGCCTTTATACTGAAGACGCAGTCAACTATAGCGTGGAGACAAATTATTTAGAATGGGAGACACCTTTCCCCGCAGTTACGATATGCGAGGCCAACGACCCCGGCGATAGAATTAAAGAGTATTTGAATGTGACCGGTCTAACGCAAAAATATTCAGCGTTCCTAAAAGACGTATTGTACTGGAATTCGAAGCACTGTTCAAAGTGTGTGAACTGCAAGATGAATCTGACCTGCATCCCTAACTACTTGGAGCTGATCGACAAGATCAGGTGGAATTGCACTCAGATGCTCACGGATTGCTGGTGGGCCGATGAGTACTTCTCTTGCTGCGATCGGAATGAAGTTTTCGACCAAGAAGGAATGAAGGAATGA

Protein

MLLVCCFGSTAVLKATLGLYTEDAVNYSVETNYLEWETPFPAVTICEANDPGDRIKEYLNVTGLTQKYSAFLKDVLYWNSKHCSKCVNCKMNLTCIPNYLELIDKIRWNCTQMLTDCWWADEYFSCCDRNEVFDQEGMKE

Similarity

Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.

Uniprot

H9J9T6   A0A2W1BV81   A0A194R5V6   A0A2A4JX78   A0A212F6L5   A0A2J7R4A5   + More
J9JYN8   A0A139WEM9   Q29AC4   A0A1B6JBP6   A0A1W4U653   A0A1J1IPA5   A0A0L0BN58   B4G2G9   H9J784   A0A1I8NTF7   A0A336KJC5   A0A336L9D3   A0A1J1HFQ2   B4IC53   A0A182QV99   A0A1I8NFJ0   A0A2H1VYY4   B4K758   A0A084VAB8   B4M0A4   B0X7T4   Q175M1   A8JPJ8   A0A182YH29   A0A182YGS8   U5ETC3   A0A2H1WKA5   A0A182KFM7   A0A0R1E564   A0A182IQ60   B3MT35   A0A182RVK1   W5JWN5   B3P846   A0A1B6DLH8   B4JRR8   A0A182W9P5   A0A182WT66   Q7Q3M0   A0A182I9Y6   A0A3B0JEQ4   T1H8J9   A0A1B6C2N5   A0A182MU54   A0A067RB98   B4KKZ4   A0A1W4WD96   A0A2A4JGG5   A0A1S4FE88   A0A2M4CME2   B4NBF2   A0A194QTW1   A0A336MNG8   A0A182PJ85   W5JKJ9   A0A3B0JMP3   A0A0L0C6A3   A0A2A4K160   Q7QEG9   A0A194QXX8   A0A154PEK5   A0A336LWX4   B4GJH6   B0XIF0   B5DHT1   A0A194PM81   A0A2H1V913   A0A2C9H862   A0A194PNV6   A0A084VP06   A0A1I8PKI8   B3MU58   A0A1B6CQI6   A0A182H6H7   A0A1I8N060   B3NKV3   Q86LG9   B4IFJ9   B4Q3Y0   A0A232F8Q4   A0A1W4UV41   B4JE99   B4MR50   B4P703   A0A182MZU2   H9IT24   A0A182J1K5   A0A0M4EIC4   D6WYQ4   A0A0L7L3I4   A0A0L7KRT3   A0A182IXY7  

Pubmed

19121390    28756777    26354079    22118469    18362917    19820115    + More
15632085    17994087    26108605    25315136    24438588    17510324    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    25244985    17550304    20920257    23761445    12364791    14747013    17210077    24845553    26483478    12571352    26109357    26109356    22936249    28648823    26227816   

EMBL

BABH01025993    BABH01025994    KZ149893    PZC78958.1    KQ460647    KPJ13203.1    + More
NWSH01000409    PCG76601.1    AGBW02009995    OWR49382.1    NEVH01007451    PNF35672.1    ABLF02020828    KQ971354    KYB26420.1    CM000070    EAL27426.3    GECU01016224    GECU01011016    JAS91482.1    JAS96690.1    CVRI01000055    CRL01562.1    JRES01001623    KNC21456.1    CH479179    EDW24014.1    BABH01013660    UFQS01000574    UFQT01000574    SSX05056.1    SSX25418.1    UFQS01002523    UFQT01002523    SSX14210.1    SSX33625.1    CVRI01000002    CRK86824.1    CH480828    EDW45211.1    AXCN02002523    ODYU01005000    SOQ45444.1    CH933806    EDW16371.1    ATLV01003057    KE524109    KFB34912.1    CH940650    EDW67266.2    DS232462    EDS42153.1    CH477398    EAT41781.1    AE014297    ABW08782.1    GANO01002845    JAB57026.1    ODYU01009237    SOQ53511.1    CM000160    KRK04333.1    AXCP01008122    CH902623    EDV30425.2    ADMH02000121    ETN67675.1    CH954182    EDV53450.1    GEDC01010828    JAS26470.1    CH916373    EDV94458.1    AAAB01008964    EAA12771.3    APCN01001075    OUUW01000005    SPP80585.1    ACPB03009340    GEDC01029779    JAS07519.1    AXCM01001403    KK852575    KDR21023.1    CH933807    EDW12744.1    NWSH01001620    PCG70674.1    GGFL01002332    MBW66510.1    CH964232    EDW81116.1    KQ461154    KPJ08435.1    UFQT01001837    SSX31962.1    ADMH02001256    ETN63400.1    OUUW01000006    SPP82133.1    JRES01000842    KNC27782.1    NWSH01000327    PCG77410.1    AAAB01008847    EAA06792.5    KPJ08431.1    KQ434874    KZC09640.1    UFQT01000264    SSX22556.1    CH479184    EDW36792.1    DS233296    EDS29204.1    CH379058    EDY69858.2    KQ459599    KPI94432.1    ODYU01001299    SOQ37318.1    KPI94429.1    ATLV01014965    KE524999    KFB39700.1    CH902624    EDV33387.1    GEDC01021551    GEDC01017664    JAS15747.1    JAS19634.1    JXUM01114203    KQ565763    KXJ70682.1    CH954179    EDV54476.1    AY226544    AE014134    AAO47370.1    AAX52675.1    CH480833    EDW46421.1    CM000361    CM002910    EDX05696.1    KMY91271.1    NNAY01000645    OXU27221.1    CH916368    EDW03619.1    CH963849    EDW74589.1    CM000158    EDW89972.1    BABH01013212    CP012526    ALC46396.1    KQ971357    EFA08448.1    JTDY01003170    KOB70022.1    JTDY01006454    KOB65998.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000007151    UP000235965    UP000007819    + More
UP000007266    UP000001819    UP000192221    UP000183832    UP000037069    UP000008744    UP000095300    UP000001292    UP000075886    UP000095301    UP000009192    UP000030765    UP000008792    UP000002320    UP000008820    UP000000803    UP000076408    UP000075881    UP000002282    UP000075880    UP000007801    UP000075900    UP000000673    UP000008711    UP000001070    UP000075920    UP000076407    UP000007062    UP000075840    UP000268350    UP000015103    UP000075883    UP000027135    UP000192223    UP000007798    UP000075885    UP000076502    UP000053268    UP000069940    UP000249989    UP000000304    UP000215335    UP000075884    UP000092553    UP000037510   

PRIDE

H9J9T6    H9J784    Q86LG9    H9IT24   

Pfam

PF00858   ASC        + More
PF02958   EcKinase
PF00595   PDZ
PF02185   HR1
PF03097   BRO1

Interpro

IPR001873   ENaC        + More
IPR017896   4Fe4S_Fe-S-bd       
IPR015897   CHK_kinase-like       
IPR004119   EcKinase-like       
IPR011009   Kinase-like_dom_sf       
IPR036034   PDZ_sf       
IPR001478   PDZ       
IPR011072   HR1_rho-bd       
IPR036274   HR1_rpt_sf       
IPR004328   BRO1_dom       
IPR038499   BRO1_sf       

SUPFAM

SSF56112   SSF56112        + More
SSF50156   SSF50156       
SSF46585   SSF46585       

Gene 3D

1.25.40.280    

ProteinModelPortal

H9J9T6   A0A2W1BV81   A0A194R5V6   A0A2A4JX78   A0A212F6L5   A0A2J7R4A5   + More
J9JYN8   A0A139WEM9   Q29AC4   A0A1B6JBP6   A0A1W4U653   A0A1J1IPA5   A0A0L0BN58   B4G2G9   H9J784   A0A1I8NTF7   A0A336KJC5   A0A336L9D3   A0A1J1HFQ2   B4IC53   A0A182QV99   A0A1I8NFJ0   A0A2H1VYY4   B4K758   A0A084VAB8   B4M0A4   B0X7T4   Q175M1   A8JPJ8   A0A182YH29   A0A182YGS8   U5ETC3   A0A2H1WKA5   A0A182KFM7   A0A0R1E564   A0A182IQ60   B3MT35   A0A182RVK1   W5JWN5   B3P846   A0A1B6DLH8   B4JRR8   A0A182W9P5   A0A182WT66   Q7Q3M0   A0A182I9Y6   A0A3B0JEQ4   T1H8J9   A0A1B6C2N5   A0A182MU54   A0A067RB98   B4KKZ4   A0A1W4WD96   A0A2A4JGG5   A0A1S4FE88   A0A2M4CME2   B4NBF2   A0A194QTW1   A0A336MNG8   A0A182PJ85   W5JKJ9   A0A3B0JMP3   A0A0L0C6A3   A0A2A4K160   Q7QEG9   A0A194QXX8   A0A154PEK5   A0A336LWX4   B4GJH6   B0XIF0   B5DHT1   A0A194PM81   A0A2H1V913   A0A2C9H862   A0A194PNV6   A0A084VP06   A0A1I8PKI8   B3MU58   A0A1B6CQI6   A0A182H6H7   A0A1I8N060   B3NKV3   Q86LG9   B4IFJ9   B4Q3Y0   A0A232F8Q4   A0A1W4UV41   B4JE99   B4MR50   B4P703   A0A182MZU2   H9IT24   A0A182J1K5   A0A0M4EIC4   D6WYQ4   A0A0L7L3I4   A0A0L7KRT3   A0A182IXY7  

KEGG

101745418    K03440 acid-sensing ion channel, other | (RefSeq) sodium channel protein Nach-like

GO

GO:0005272   GO:0016021   GO:0006814   GO:0016787   GO:0007165   GO:0016020   GO:0015074   GO:0051103   GO:0005524   GO:0008270   GO:0042555   GO:0048384  

PANTHER

PTHR11690  

SignalP

Position:   1 - 18,         Likelihood:  0.573338

 

 

Length:

140

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0385900000000001

Exp number, first 60 AAs:

0.03839

Total prob of N-in:

0.05625

outside

1  -  140

 

 

Pi

253.629254

Theta

192.710468

Tajima's D

0.998242

CLR

0.000001

CSRT

0.657867106644668

Interpretation

Possibly Positive selection