Gene

KWMTBOMO03583

Pre Gene Modal

BGIBMGA006279

Annotation

PREDICTED:_sodium_channel_protein_Nach-like_[Bombyx_mori]

Location

Bomo_Chr6(-):13001695-13003841      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 3.994

CDS

ATGGTGTCCGTGGCTTTAGAAAACGCGTTGAGTAGCTGCACGTCTTTACCTCTAGTCAATGATTTTGAAGCCAGTTTGAGGGTAGAACAAACAATAACAGACGTTGCAGTCCAATCGATATCTCCAGTAAGTCGAGATTGTCTGTTCAGCCACGAGGTACCCTCTTTCGCCCAACATTGGCCATTCAAGAAGTATTCATACAGCGCTTGTGTTCTATACTGTAGGGCCAAAGCTCAAACGGATGTTTGTAACTGCACTCATCATTACATGCCCAATATTGGTGATTTCCCAACTTGTAATATCAGCGGTCTGGCTTGTCTCCATCTCAATAGTGATTCATTAATTGTTGAAGGAAGCGAATGTCCTATGGAATGTGACAACGTTGTTTACACCACAATCCAGACATCCTGTTTTCGTCATACGGGGAAACTGCATCCGAGCTTGGTACACCGTGGCACGCGAGGATCTGTGAAGCTTGGACAACTGCCCACGTTAAGAGTCCGAAGACATGCTATCAGAGATATGTTGGGTCTTGTTGGTAATGTTTTTCTTGATGTTCTCGCTTGTAACGGTCAATTGTAA

Protein

MVSVALENALSSCTSLPLVNDFEASLRVEQTITDVAVQSISPVSRDCLFSHEVPSFAQHWPFKKYSYSACVLYCRAKAQTDVCNCTHHYMPNIGDFPTCNISGLACLHLNSDSLIVEGSECPMECDNVVYTTIQTSCFRHTGKLHPSLVHRGTRGSVKLGQLPTLRVRRHAIRDMLGLVGNVFLDVLACNGQL

Similarity

Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.

Uniprot

A0A2A4JX78   A0A194R5V6   A0A212F6L5   A0A1B6KNJ5   A0A1W4WD96   B5DHT1   + More
B4GJH6   H9J784   A0A2M4CME2   A0A3B0JMP3   A0A182YGS8   A0A0N0PA75   A0A194QXX8   A0A1W4UV41   W5JKJ9   B3MU58   A0A2A4K160   B4JE99   A0A0M5J9K0   A0A0M5J227   A0A2H1WKA5   B4LUL8   A0A2H1V913   B4Q3Y0   B4P703   Q86LG9   A0A194PM81   B4MR50   A8JPJ8   B4IC53   B4IFJ9   H9IT24   A0A182NEB6   A0A084VP06   B3NKV3   D6WYQ4   A0A067QTA5   A0A182PJ85   A0A182W9P5   A0A182RVK1   A0A0L0C6A3   A0A182MU54   B3MT35   B4KKZ4   Q7Q3M0   A0A182WT66   B4NBF2   A0A0R1E564   U5ETC3   A0A0L7L154   A0A182KFM7   B4K758   B0W4F9   Q175M1   B0XIF0   A0A3B0JEQ4   B3P846   A0A1S4FE88   A0A1J1HFQ2   A0A0T6BIH2   A0A182GGY7   B4G2G9   Q29AC4   A0A1I8N060   A0A1A9WH83   A0A1I8PKI8   A0A3B0KC49   A0A182FMG4   A0A1W4X5K5   A0A2J7PHM1   A0A194QTW1   A0A0R3NI43   B3N1M1   A0A1W4U653   A0A1S4FXI6   B4GED1   Q297B3   A0A0M4EIC4   A0A182K7N9   A0A084WH78   A0A1B0GF06   A0A1B0FV54   A0A1B0BEX6   A0A1A9XEU6   A0A182GLK8   A0A182GEY7  

Pubmed

26354079    22118469    15632085    17994087    19121390    25244985    + More
20920257    23761445    22936249    17550304    10731132    12537568    12537572    12537573    12537574    12571352    16110336    17569856    17569867    26109357    26109356    24438588    18362917    19820115    24845553    26108605    12364791    14747013    17210077    26227816    17510324    26483478    25315136    23185243   

EMBL

NWSH01000409    PCG76601.1    KQ460647    KPJ13203.1    AGBW02009995    OWR49382.1    + More
GEBQ01026976    JAT13001.1    CH379058    EDY69858.2    CH479184    EDW36792.1    BABH01013660    GGFL01002332    MBW66510.1    OUUW01000006    SPP82133.1    KQ458782    KPJ05097.1    KQ461154    KPJ08431.1    ADMH02001256    ETN63400.1    CH902624    EDV33387.1    NWSH01000327    PCG77410.1    CH916368    EDW03619.1    CP012523    ALC40356.1    ALC40344.1    ODYU01009237    SOQ53511.1    CH940649    EDW64204.1    ODYU01001299    SOQ37318.1    CM000361    CM002910    EDX05696.1    KMY91271.1    CM000158    EDW89972.1    AY226544    AE014134    AAO47370.1    AAX52675.1    KQ459599    KPI94432.1    CH963849    EDW74589.1    AE014297    ABW08782.1    CH480828    EDW45211.1    CH480833    EDW46421.1    BABH01013212    ATLV01014965    KE524999    KFB39700.1    CH954179    EDV54476.1    KQ971357    EFA08448.1    KK853042    KDR12140.1    JRES01000842    KNC27782.1    AXCM01001403    CH902623    EDV30425.2    CH933807    EDW12744.1    AAAB01008964    EAA12771.3    CH964232    EDW81116.1    CM000160    KRK04333.1    GANO01002845    JAB57026.1    JTDY01003653    KOB69207.1    CH933806    EDW16371.1    DS231837    EDS33542.1    CH477398    EAT41781.1    DS233296    EDS29204.1    OUUW01000005    SPP80585.1    CH954182    EDV53450.1    CVRI01000002    CRK86824.1    LJIG01000245    KRT86695.1    JXUM01062826    JXUM01062827    KQ562217    KXJ76380.1    CH479179    EDW24014.1    CM000070    EAL27426.3    OUUW01000007    SPP83286.1    NEVH01025135    PNF15837.1    KPJ08435.1    KRT00628.1    KRT00630.1    CH902661    EDV33990.2    CH479182    EDW33966.1    EAL28293.2    KRT00629.1    KRT00631.1    CP012526    ALC46396.1    ATLV01023795    KE525346    KFB49572.1    CCAG010012707    AJWK01010382    AJWK01010383    JXJN01013082    JXUM01073172    KQ562760    KXJ75174.1    JXUM01058874    KQ562023    KXJ76884.1   

Proteomes

UP000218220    UP000053240    UP000007151    UP000192223    UP000001819    UP000008744    + More
UP000005204    UP000268350    UP000076408    UP000053268    UP000192221    UP000000673    UP000007801    UP000001070    UP000092553    UP000008792    UP000000304    UP000002282    UP000000803    UP000007798    UP000001292    UP000075884    UP000030765    UP000008711    UP000007266    UP000027135    UP000075885    UP000075920    UP000075900    UP000037069    UP000075883    UP000009192    UP000007062    UP000076407    UP000037510    UP000075881    UP000002320    UP000008820    UP000183832    UP000069940    UP000249989    UP000095301    UP000091820    UP000095300    UP000069272    UP000235965    UP000092444    UP000092461    UP000092460    UP000092443   

PRIDE

H9J784    Q86LG9    H9IT24   

Pfam

PF00858   ASC        + More
PF00096   zf-C2H2
PF07776   zf-AD
PF02958   EcKinase

Interpro

IPR001873   ENaC        + More
IPR017896   4Fe4S_Fe-S-bd       
IPR011009   Kinase-like_dom_sf       
IPR004119   EcKinase-like       
IPR013087   Znf_C2H2_type       
IPR036322   WD40_repeat_dom_sf       
IPR036236   Znf_C2H2_sf       
IPR012934   Znf_AD       
IPR001680   WD40_repeat       
IPR015897   CHK_kinase-like       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR015943   WD40/YVTN_repeat-like_dom_sf       

SUPFAM

SSF56112   SSF56112        + More
SSF57667   SSF57667       
SSF50978   SSF50978       
SSF50998   SSF50998       

Gene 3D

2.130.10.10    

ProteinModelPortal

A0A2A4JX78   A0A194R5V6   A0A212F6L5   A0A1B6KNJ5   A0A1W4WD96   B5DHT1   + More
B4GJH6   H9J784   A0A2M4CME2   A0A3B0JMP3   A0A182YGS8   A0A0N0PA75   A0A194QXX8   A0A1W4UV41   W5JKJ9   B3MU58   A0A2A4K160   B4JE99   A0A0M5J9K0   A0A0M5J227   A0A2H1WKA5   B4LUL8   A0A2H1V913   B4Q3Y0   B4P703   Q86LG9   A0A194PM81   B4MR50   A8JPJ8   B4IC53   B4IFJ9   H9IT24   A0A182NEB6   A0A084VP06   B3NKV3   D6WYQ4   A0A067QTA5   A0A182PJ85   A0A182W9P5   A0A182RVK1   A0A0L0C6A3   A0A182MU54   B3MT35   B4KKZ4   Q7Q3M0   A0A182WT66   B4NBF2   A0A0R1E564   U5ETC3   A0A0L7L154   A0A182KFM7   B4K758   B0W4F9   Q175M1   B0XIF0   A0A3B0JEQ4   B3P846   A0A1S4FE88   A0A1J1HFQ2   A0A0T6BIH2   A0A182GGY7   B4G2G9   Q29AC4   A0A1I8N060   A0A1A9WH83   A0A1I8PKI8   A0A3B0KC49   A0A182FMG4   A0A1W4X5K5   A0A2J7PHM1   A0A194QTW1   A0A0R3NI43   B3N1M1   A0A1W4U653   A0A1S4FXI6   B4GED1   Q297B3   A0A0M4EIC4   A0A182K7N9   A0A084WH78   A0A1B0GF06   A0A1B0FV54   A0A1B0BEX6   A0A1A9XEU6   A0A182GLK8   A0A182GEY7  

KEGG

101745418    K03440 acid-sensing ion channel, other | (RefSeq) sodium channel protein Nach-like

GO

GO:0016021   GO:0005272   GO:0006814   GO:0005634   GO:0008270   GO:0003676   GO:0016787   GO:0016020   GO:0015074   GO:0051103   GO:0005524   GO:0042555   GO:0048384  

PANTHER

PTHR11690  

Length:

193

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03925

Exp number, first 60 AAs:

0.00035

Total prob of N-in:

0.03675

outside

1  -  193

 

 

Pi

239.484424

Theta

224.046728

Tajima's D

0.208784

CLR

0.508296

CSRT

0.429378531073446

Interpretation

Uncertain