Gene

KWMTBOMO03578  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006308

Annotation

PREDICTED:_chaoptin_[Bombyx_mori]

Location

Bomo_Chr6(+):12859982-12889273      View in EpiBrowser

Full name

Chaoptin      

Alternative Name

Photoreceptor cell-specific membrane protein

Location in the cell

Nuclear   Reliability : 2.343

CDS

ATGAGAAATAATAATCTGGTGATAGATTTATCTGGTGAAAGAACTAGAAGTTTGATGGCGGTGGTGAAGTTTGGTTACACCCTGGTGGCTGTGACCTTACTGCTGATGATATGGGCGTCGTTGTCCCGAGCTATAGAGCTTCATGTGGACACGGGACATCCGCCATGCTTGTTCCAAGCACTCTGCACTTGTTCAAAACCAGCTGCAGATCTCGGAATCGTGACCTGCAATCACGTGCCCCTTCTGAGGGTCCCCAGTACCATCAACAACTCCAAGGTGTTCATGCTGCAGCTAACTGGAAACAAGATCCGGGATCTAGAGCCACAGTTCTTTCAAACTACAGGACTCTACAGATTAGCGATAAACAAGAACCCTTTGGAAAGTATACACGAAGAGGCCTTTTACGGCTTAGATAATACACTGTGGGAGCTCGAGTTACGTGAAGACAAACTGATTGCAGTACCGAGCAGAGCGTTAAGATATCTGCAGAAGTTACGGTTGTTGGACTTATCAGGCAACGAAATCACGGACATATCAGGCGACAATTGGCGTGGACTAGAGAACACTCTGCAGATATTGATTTTAGCCGACAACTCGATAGCGAACCTACCTTTAGATGCATTTAGTGGACTGCCCTTATTGGAGACACTGGACTTACACGGAAACCACTTGTCTGTTATTGACAGCGGAGTGTTCCGTGATGGAATGAGCAGATTAAATAGGCTGCTATTAGGAGACAACCAGCTGTCGTACATCCCTTATGAGGAACTGTCACCATTAAGGCAACTGAGGGTCTTGGATTTGTCCAGTAACGTTATAAAACAAGTACCACCGTTACATGATCTAAACGGAATCAAACTTTCTTTGGATCTCTTGAAACTAGACAACAATATGATCCAGGTTCTGTATCCGGGCGCATTCAAATACTTTAACGTATTGAACTCGACGACCCTCGACCGGAATCCAATCGTGACGATAAGAGAAGACGCATTCCGTAACGCGAAAATAAAGTCTCTATCGCTAAGAGACTGCAGTATATCCGACCTGTCTCCAGCAGCATTTGCTGGTTTAGAGAACAGTCTGATTAGCTTGGACTTATCCGAGAACAACTTGACAATGGTGTCCAAATTCATGCTGAATAAACTCGATTCTTTAAGGTTCTTAAACTTGAGAGAAAATAAGGTTGACATAAGCTTACTGACCACAAATATGCCGTCGGAGTATCAACAAAGTGCTTTCAACAGTTTCCAATACAGACTTTTTTCGTTAGACGTGAGCGGCGCTAACTCTATAGAAATCAGTCTACAGGATGCTAAGAGAATGAGGTCGTTGAGGTCTCTGTCGGTTGGCAAACTGTTACGTCAAAGCATTAAGACTGAAGATTTCCTGGATTTCGGTATGGAGCTAGAAGACTTGAAGTTATTTGGCAGCAATCTCATCAGGATCGAATCGAGCGCCTTCCAATATGTCAGGACCATCAAGACCCTGGATCTCTCGGAGAATAACATAGAGTACATCGACCCGTTCGCTTTTGCCGAGCTGCACAGCCTTATCACATTGAAGATGGCGCGCGGTTTGTCCGATTCGGTCATAATTCTACCGTTCGAGCCGCTGAAGGCGCTGACCGAACTCCAGTACCTGGACATGAGCAACAACAAACTGAAAAACGTGCCGGACACCTCGTTTCATTTCTTGAAGAACTTGAGATCGTTGAACTTAGAAGATAACGCAATAGAACACTTTTCAAAGGGAACTCTACAAGCCGATATCCACGGAAAATTGGAGAGCATATGCCTCTCCTTGAACCAGATGAAACAAATAGGGCAACACACATTCGTCGAGCTGAAGGAAATGCAAGAAATCCTCATAGAAGATAACCTCATACAGTACATACAGAGGAGAGCGTTCGCCAGCCTCGATAACTTGAAAATTATCAAGCTCAAAGGGAATCGAATCAACGAAATTTCGGAGGAAGCATTCCAAAACATACCGGCTCTCAAAGAGCTTGACGTCTCGTTCAACAAACTGGAAACGTTTAAGTTCTCTATATTCGACCAAGTGGGAACGGCAACGGCTCTGAAAGTGAACGCTTCATACAACAACATCATTGTATTGACCGATTCGAACGCACCTAGTATCTTCTCTTCGAATTTTTATCCGCCACCGAAAGCGCAGAGATTGAATTCATATTACGGAGATTTCCCTATATCACCAGGTCTCGGAACTGTGTCCGTAAATTTGAGAGTGTTGGATTTTTCCCACAATAATGTCACATATATCGCGCCTTATTACTTCAGGCACGCCGATTTAACTCTATCCGAGTTATATCTGTCCCACAACAAACTGAGGAACATAACGAGAGAAGTATTCGGTTCTATGGTCATGTTGCAATACCTGGATTTATCCCACAACCACATCTATCACATGGAATACGACTGTTTTAAGAAAGTGAAGAATTTACAGATCATAAACTTGTCCCACAACCACCTCATCGAACTGCCAGTCGGAATGTTCCACGACATGCAATCTCTGACGTCGGTAGACCTCTCAAATAACAACATCAGAAATTTCGCGGAAAATCTGATTATATCACCAGCGTTGGAAAGGTTAGACTTCTCCGATAATGAGCTGTCGAGGGTGCCGACTAATTGCTTAGCCCCAGCCGCGGCTGCCAACTTAGTTGAACTAGATCTGAGCGGGAACACTATACCTACAGTGTCGATGTCCGACTTCGTACAAAGATTCAGGAACCCCGAGCCGGGAGAGTGGCCCGAGGAGTCGGACTACAGCGACGAGTACATGTACCACACGGCTAGACGAGATCACACCAGAGTTTACCACCAAAAAAAGCAATACCCACAAAACGTTTTGTATAAGTCTTTAGCGTGGTTGGATCTGTCGGATAATCATCTGGTACGAATCGAAACGGCTTCGTTCTCGGCGCTGCCCAAGCTGAAGTGGTTGGACATAAGCAACAACAACCCGTTCAATAACGGGGAGAGAGGAAACAATATATTTAAAGGACTCGAAAGACGTCTTACACATTTAGGGTTGAAGAATATACCCTCAATGCTGCTCTCGAAACTGAAGAGTCTGGATCTATCCTACAATAATTTACCATCAGTACCTCCGGATACGACAGCTAACCTAACCCGACTCCGAGTACTGGATTTATCCTACAACGACCTGACAACAGTTCCAGTGGCAACGCATTCACTGACCGAGCTCCGTTGGCTGTCGTTGTCTGGCAACCCCATCACTGCGCTCATGAACACGAGCCTTTACGGAATATCGCCGCGCCTGGAGTACCTGGACGTTACTAGGCTACGTTTGCGAATATTTGAGCTTGGCGCCTTCGGAAAAATGTACGCACTGAGAACTCTCAAAGTGACGTCATATTCGAATCACAGAGACTTCAACATCCCGCGCATGTTGACTTACAACGCCGGACTCGAGAACCTTCTGGTTGAAATCGACGAACTAGGAACCGAATTCGGGAAGGAAATGTACGGAGCACTGCCTTTGAAGCTCAATAATATTACAATTACGGGCCAAAGTTTGAAATACCTAACTCAATATTTGATAAGTGGAGTTCAATCGAGGTCCCTTCGTCTGACGATATACAATACGAGCGTCGAAGAAATAGCCGGCGAAGTATTTTGGCGGCCGGGACGAGTCCGGAACTTGACCTTGGATTTGAGGAATAATTACATTTCTAGAGTACCCAATCCGAGTCAGAGGGGATGGCCCGGGGTTCCGAACTCTTTGTTCCTAGAAGATATATTTGTTGCTGGGAATCCATTGATATGCGACTGCGGCGTCGGATGGATTGAAGCATGGGATAGAAAGAGAAGACAGTATCTTTGTAATGATCCTCACAGTTGTGTGGCGACGAGAGATGACGTCAGATTCGCTACCTGCCCTTCGTATGAAAACAGATCCTTGAGCGATGTACTGTCAAGAGATCTAGATTGTGATTGGAATAAAGGATTTTTAAGTTCACCAAATACGTTCGTAATCATAGGAATGTCAATTCTAACGTTATTATACATTTGA

Protein

MRNNNLVIDLSGERTRSLMAVVKFGYTLVAVTLLLMIWASLSRAIELHVDTGHPPCLFQALCTCSKPAADLGIVTCNHVPLLRVPSTINNSKVFMLQLTGNKIRDLEPQFFQTTGLYRLAINKNPLESIHEEAFYGLDNTLWELELREDKLIAVPSRALRYLQKLRLLDLSGNEITDISGDNWRGLENTLQILILADNSIANLPLDAFSGLPLLETLDLHGNHLSVIDSGVFRDGMSRLNRLLLGDNQLSYIPYEELSPLRQLRVLDLSSNVIKQVPPLHDLNGIKLSLDLLKLDNNMIQVLYPGAFKYFNVLNSTTLDRNPIVTIREDAFRNAKIKSLSLRDCSISDLSPAAFAGLENSLISLDLSENNLTMVSKFMLNKLDSLRFLNLRENKVDISLLTTNMPSEYQQSAFNSFQYRLFSLDVSGANSIEISLQDAKRMRSLRSLSVGKLLRQSIKTEDFLDFGMELEDLKLFGSNLIRIESSAFQYVRTIKTLDLSENNIEYIDPFAFAELHSLITLKMARGLSDSVIILPFEPLKALTELQYLDMSNNKLKNVPDTSFHFLKNLRSLNLEDNAIEHFSKGTLQADIHGKLESICLSLNQMKQIGQHTFVELKEMQEILIEDNLIQYIQRRAFASLDNLKIIKLKGNRINEISEEAFQNIPALKELDVSFNKLETFKFSIFDQVGTATALKVNASYNNIIVLTDSNAPSIFSSNFYPPPKAQRLNSYYGDFPISPGLGTVSVNLRVLDFSHNNVTYIAPYYFRHADLTLSELYLSHNKLRNITREVFGSMVMLQYLDLSHNHIYHMEYDCFKKVKNLQIINLSHNHLIELPVGMFHDMQSLTSVDLSNNNIRNFAENLIISPALERLDFSDNELSRVPTNCLAPAAAANLVELDLSGNTIPTVSMSDFVQRFRNPEPGEWPEESDYSDEYMYHTARRDHTRVYHQKKQYPQNVLYKSLAWLDLSDNHLVRIETASFSALPKLKWLDISNNNPFNNGERGNNIFKGLERRLTHLGLKNIPSMLLSKLKSLDLSYNNLPSVPPDTTANLTRLRVLDLSYNDLTTVPVATHSLTELRWLSLSGNPITALMNTSLYGISPRLEYLDVTRLRLRIFELGAFGKMYALRTLKVTSYSNHRDFNIPRMLTYNAGLENLLVEIDELGTEFGKEMYGALPLKLNNITITGQSLKYLTQYLISGVQSRSLRLTIYNTSVEEIAGEVFWRPGRVRNLTLDLRNNYISRVPNPSQRGWPGVPNSLFLEDIFVAGNPLICDCGVGWIEAWDRKRRQYLCNDPHSCVATRDDVRFATCPSYENRSLSDVLSRDLDCDWNKGFLSSPNTFVIIGMSILTLLYI

Description

Required for photoreceptor cell morphogenesis. Mediates homophilic cellular adhesion.

Similarity

Belongs to the membrane-bound acyltransferase family.
Belongs to the chaoptin family.

Keywords

Cell adhesion   Cell membrane   Complete proteome   Direct protein sequencing   Glycoprotein   Leucine-rich repeat   Membrane   Reference proteome   Repeat   Sensory transduction   Signal   Vision  

Feature

chain  Chaoptin

Uniprot

H9J9W3   A0A2A4K7F7   A0A194QG22   A0A212EHN3   A0A194RBD0   A0A1W4WDR3   + More
A0A139WMQ1   A0A232ESX0   K7ITY1   A0A3L8DPM4   A0A088AI45   A0A026WPZ8   A0A2J7PT83   A0A0C9RDW7   A0A1B0FP58   A0A0B4KHK5   A0A2A3EBH2   A0A0B4KHX5   A0A1B6CP54   A0A0B4KHG5   B4PNB0   A0A1I8NSG5   A0A0A1WGJ4   B4NFC1   B4K6G7   F0JAG8   B3M1K3   P12024   E2A0X8   B4M5V1   B4QSK1   A0A158NV56   B3P7S1   B4HZZ9   F4WS44   A0A0B4KI35   A0A182IPR6   A0A1I8NSG2   A0A1I8NSG1   A0A1I8NSG3   A0A1I8NH09   A0A0M5JA11   E2C6Q0   W8AFI2   A0A1W4UI50   B4GN61   A0A195CFH1   A0A034VV46   A0A1I8NSF9   A0A1I8NH07   Q29CE5   A0A3B0JZ76   A0A0L0BY72   A0A1Q3FSG3   A0A0K8V001   B4JYP5   A0A1Q3FT09   A0A084VLQ4   A0A0M9A3U7   B0X0Q6   A0A310SBP2   Q16X81   A0A0J7KTW9   A0A1B6D0B7   F0JAL7   A0A0K8VU17   A0A182XYE2   A0A182R217   A0A182N118   E3CTQ1   E3CTS9   A0A182PNT2   A0A154PE71   A0A182M164   A0A0K8WJJ8   Q5TUS9   B7FNR3   A0A1S4G8C7   A0A1B0AJW3   A0A182QLG2   A0A182XNN1   A0A182VBH2   A0A182HIU6   A0A182UBZ4   A0A195F4E1   A0A1B6F7H5   A0A0T6AZL7   A0A151XE86   A0A195DZQ7   A0A2S2QXL6   J9JN12   E9JCB6   A0A2H8TLK4   A0A182VVJ1   E0VD25   A0A0P6BPZ4   A0A0P6HGB5   A0A0P5ZFV8  

Pubmed

19121390    26354079    22118469    18362917    19820115    28648823    + More
20075255    30249741    24508170    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17994087    17550304    25830018    3124963    3920657    6420071    17893096    19415110    20798317    21347285    21719571    25315136    24495485    25348373    15632085    26108605    24438588    17510324    25244985    12364791    21282665    20566863   

EMBL

BABH01025981    BABH01025982    BABH01025983    BABH01025984    NWSH01000077    PCG79868.1    + More
KQ459249    KPJ02396.1    AGBW02014861    OWR40981.1    KQ460647    KPJ13206.1    KQ971312    KYB29164.1    NNAY01002364    OXU21458.1    QOIP01000006    RLU22192.1    KK107135    EZA58102.1    NEVH01021919    PNF19535.1    GBYB01011277    JAG81044.1    CCAG010007645    AE014297    AGB96514.1    KZ288293    PBC29040.1    AGB96516.1    GEDC01022147    JAS15151.1    AGB96515.1    CM000160    EDW99192.2    GBXI01016290    GBXI01011563    JAC98001.1    JAD02729.1    CH964251    EDW82988.2    CH933806    EDW16267.2    BT126010    ADY17709.1    CH902617    EDV43294.2    M19017    M19008    M19009    M19010    M19011    M19012    M19013    M19014    M19016    K03274    GL435626    EFN73031.1    CH940652    EDW59027.2    CM000364    EDX15098.1    ADTU01026899    CH954182    EDV52979.1    CH480819    EDW53606.1    GL888296    EGI62972.1    AGB96513.1    CP012526    ALC48036.1    GL453161    EFN76362.1    GAMC01019575    JAB86980.1    CH479186    EDW39187.1    KQ977827    KYM99465.1    GAKP01012638    JAC46314.1    CM000070    EAL26701.2    OUUW01000005    SPP80820.1    JRES01001160    KNC24983.1    GFDL01004528    JAV30517.1    GDHF01020100    JAI32214.1    CH916377    EDV90807.1    GFDL01004492    JAV30553.1    ATLV01014543    KE524974    KFB38898.1    KQ435742    KOX76667.1    DS232243    EDS38299.1    KQ770716    OAD52623.1    CH477545    EAT39239.1    LBMM01003239    KMQ93768.1    GEDC01018129    JAS19169.1    BT126059    ADY17758.1    GDHF01028643    GDHF01009937    JAI23671.1    JAI42377.1    BT125717    ADO51079.1    BT125745    ADP38085.1    KQ434886    KZC10143.1    AXCM01009692    GDHF01000981    JAI51333.1    AAAB01008846    EAL41313.4    BT053753    ACK77671.1    AXCN02001386    APCN01004099    KQ981820    KYN35251.1    GECZ01023644    JAS46125.1    LJIG01022445    KRT80569.1    KQ982254    KYQ58673.1    KQ980031    KYN18187.1    GGMS01013316    MBY82519.1    ABLF02035208    ABLF02035212    ABLF02035218    GL771786    EFZ09539.1    GFXV01003114    MBW14919.1    DS235070    EEB11281.1    GDIP01026596    JAM77119.1    GDIQ01019867    JAN74870.1    GDIP01044392    JAM59323.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000053240    UP000192223    + More
UP000007266    UP000215335    UP000002358    UP000279307    UP000005203    UP000053097    UP000235965    UP000092444    UP000000803    UP000242457    UP000002282    UP000095300    UP000007798    UP000009192    UP000007801    UP000000311    UP000008792    UP000000304    UP000005205    UP000008711    UP000001292    UP000007755    UP000075880    UP000095301    UP000092553    UP000008237    UP000192221    UP000008744    UP000078542    UP000001819    UP000268350    UP000037069    UP000001070    UP000030765    UP000053105    UP000002320    UP000008820    UP000036403    UP000076408    UP000075900    UP000075884    UP000075885    UP000076502    UP000075883    UP000007062    UP000092445    UP000075886    UP000076407    UP000075903    UP000075840    UP000075902    UP000078541    UP000075809    UP000078492    UP000007819    UP000075920    UP000009046   

PRIDE

H9J9W3    F0JAG8    P12024    E3CTQ1    E3CTS9    B7FNR3    + More

Pfam

PF13516   LRR_6        + More
PF13855   LRR_8
PF13306   LRR_5
PF00560   LRR_1
PF09817   Zwilch
PF03062   MBOAT
PF12799   LRR_4

Interpro

IPR001611   Leu-rich_rpt        + More
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR032675   LRR_dom_sf       
IPR026906   LRR_5       
IPR000483   Cys-rich_flank_reg_C       
IPR000225   Armadillo       
IPR018630   Zwilch       
IPR004299   MBOAT_fam       
IPR025875   Leu-rich_rpt_4       

Gene 3D

3.80.10.10    

ProteinModelPortal

H9J9W3   A0A2A4K7F7   A0A194QG22   A0A212EHN3   A0A194RBD0   A0A1W4WDR3   + More
A0A139WMQ1   A0A232ESX0   K7ITY1   A0A3L8DPM4   A0A088AI45   A0A026WPZ8   A0A2J7PT83   A0A0C9RDW7   A0A1B0FP58   A0A0B4KHK5   A0A2A3EBH2   A0A0B4KHX5   A0A1B6CP54   A0A0B4KHG5   B4PNB0   A0A1I8NSG5   A0A0A1WGJ4   B4NFC1   B4K6G7   F0JAG8   B3M1K3   P12024   E2A0X8   B4M5V1   B4QSK1   A0A158NV56   B3P7S1   B4HZZ9   F4WS44   A0A0B4KI35   A0A182IPR6   A0A1I8NSG2   A0A1I8NSG1   A0A1I8NSG3   A0A1I8NH09   A0A0M5JA11   E2C6Q0   W8AFI2   A0A1W4UI50   B4GN61   A0A195CFH1   A0A034VV46   A0A1I8NSF9   A0A1I8NH07   Q29CE5   A0A3B0JZ76   A0A0L0BY72   A0A1Q3FSG3   A0A0K8V001   B4JYP5   A0A1Q3FT09   A0A084VLQ4   A0A0M9A3U7   B0X0Q6   A0A310SBP2   Q16X81   A0A0J7KTW9   A0A1B6D0B7   F0JAL7   A0A0K8VU17   A0A182XYE2   A0A182R217   A0A182N118   E3CTQ1   E3CTS9   A0A182PNT2   A0A154PE71   A0A182M164   A0A0K8WJJ8   Q5TUS9   B7FNR3   A0A1S4G8C7   A0A1B0AJW3   A0A182QLG2   A0A182XNN1   A0A182VBH2   A0A182HIU6   A0A182UBZ4   A0A195F4E1   A0A1B6F7H5   A0A0T6AZL7   A0A151XE86   A0A195DZQ7   A0A2S2QXL6   J9JN12   E9JCB6   A0A2H8TLK4   A0A182VVJ1   E0VD25   A0A0P6BPZ4   A0A0P6HGB5   A0A0P5ZFV8  

PDB

4KNG     E-value=2.32196e-23,     Score=275

KEGG

101745125    no KO assigned | (RefSeq) chaoptin

GO

GO:0016021   GO:1990423   GO:0007093   GO:0016028   GO:0050896   GO:0032528   GO:0042052   GO:0007601   GO:0005886   GO:0007156   GO:0035996   GO:0046658   GO:0004721   GO:0005515   GO:0005615   GO:0015074   GO:0006468   GO:0016020   GO:0051103   GO:0005524   GO:0008270   GO:0042555   GO:0048384  

Subcellular location

Cell membrane  

Length:

1351

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.76643

Exp number, first 60 AAs:

21.38636

Total prob of N-in:

0.99826

POSSIBLE N-term signal

sequence

inside

1  -  19

TMhelix

20  -  42

outside

43  -  1351

 

 

Pi

244.794704

Theta

170.91046

Tajima's D

1.47912

CLR

0.3217

CSRT

0.778561071946403

Interpretation

Uncertain