Gene

KWMTBOMO03573  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006282

Annotation

PREDICTED:_uncharacterized_protein_LOC106120359_[Papilio_xuthus]

Location

Bomo_Chr6(-):12656311-12661396      View in EpiBrowser

Location in the cell

Lysosomal   Reliability : 1.266

CDS

ATGAAGGCTTTGGCAGCTGTACTATTGTTAGTTGTGGCAGTGAACGGTGCGTGGAAAGGTGGACTGCGGACAACATGGGGTGTAGGCCTTGGTCTAGGAACGGATTTTTTCTATGAGATTCCAAGGTCACTGGAAGAGGTTAAGTCTCAGGGCTGGGTTTTAACCGACAAAGCTGACGGACTTCCTCTTCCTTCGCTCGCCTTGTATTGTTCTGAAGACCGCATCTTATGCGGATTTTTTGACGAAACCGAATATGTGGTGGGATTGCAGGTTTCTTTACCCGTAGATGAGGTCACGGACATTATTTTTGATATGCCAACCCAAGGTTTTACAATATGGGAAACAGAAGTGGACGGGAAACTTAAAAAATTCTACAGTATCCAACAATACTTCATCAATGAAGATACTCTAAAACAAAGTGTTGAGGATCGTTTGAGTAAGTGGGATAGTTCCAAGACTCTTCAAGAAAAATCCATTTGGGTAACCGGCTTCAATGGTACCCTTCTTGAAATATCCACCGTTGCTGATGATATTGCTAACGGAGATGATTTCACTAAGCAAGCCTGTGTTCCTTGGATGGGGCGTCATTATTACTACAAGATGTCTGCGGAGACGGAGTGCAAAGCTGACACATTGTTACCATGGTTTCCGATTGTTGAATCCGGGGAATTGATCGCTACCGGTTTTATTAGCTTCCTGAAACTTTCGAACACTTACAAATGGTTTGAGAAGCCTTCGAAAGCAGCTGTTCAATTCATTGTTCCTGATGGCCCTAAGTGCTTATACGATTTGGCTGAGGATTCTGGACTAACAACAATGCACATCTATTATGTCAATCAACCATGGTTGGTCAGTTGCCTGTGGCAGTGA

Protein

MKALAAVLLLVVAVNGAWKGGLRTTWGVGLGLGTDFFYEIPRSLEEVKSQGWVLTDKADGLPLPSLALYCSEDRILCGFFDETEYVVGLQVSLPVDEVTDIIFDMPTQGFTIWETEVDGKLKKFYSIQQYFINEDTLKQSVEDRLSKWDSSKTLQEKSIWVTGFNGTLLEISTVADDIANGDDFTKQACVPWMGRHYYYKMSAETECKADTLLPWFPIVESGELIATGFISFLKLSNTYKWFEKPSKAAVQFIVPDGPKCLYDLAEDSGLTTMHIYYVNQPWLVSCLWQ

Uniprot

A0A348ARE3   H9J9T8   A0A194Q7G6   A0A194RJL1   A0A194RPR4   A0A212F8X0   + More
A0A194RKF0   A0A2A4J3W2   A0A2W1BGD7   A0A2A4J3P8   A0A2A4J2K5   A0A2W1B0B8   A0A212F8Y2   A0A2W1B5C2   A0A2A4J3S8   A0A2H1X436   B1NLD7   A0A2H1WZU4   A0A2H1WZI2   A0A2K8JLE3   A0A0A9XW04   A0A146L760   A0A0A9WTE6   A0A1D1ZDW1   A0A1B6JCM2   A0A1B6L089   A0A1B6KUQ9   A0A1B6M7K5   A0A1B6F1Y6   A0A3G9CLZ2   A0A2R7W9Q1   C3Y5T8   A0A210R159   A0A1B6KHA3   A0A1B6C8E0   C3Y5U1   T1IXM1   A0A1S3JDE4   A0A1B6IDP6   V4C0Z0   A0A226F3Q4   A0A1B6IFE9   A0A1W7R968   T1J4X8   A0A1D2NIT9   V4ADY4   A0A1I8GH03   A0A1I8HZZ2   A0A1D2N6X1   A0A1I8ITE8   A0A226E1C8   K1QTT1   A0A210R5Y3   A0A0K2TFV4   C3Y5U4   A0A0B6YRW2   A0A2C9KD43   C3Y5U2   C3Y5U3   A0A226ERP2   A0A0K2VK12   T1ISJ9   T1JA23   A0A1B6HGZ3   A0A0K2VJM8   A0A1B6LB36   A0A1B6JIB1   A0A1B6I8C4   A0A1S3IAF0   A0A2B4SJL6   A0A226DNZ2  

Pubmed

19121390    26354079    22118469    28756777    18314941    25401762    + More
26823975    26279640    18563158    28812685    23254933    27289101    26392545    22992520    15562597   

EMBL

LC259005    BBC08867.1    BABH01025962    KQ459324    KPJ01482.1    KQ460045    + More
KPJ18018.1    KPJ18016.1    AGBW02009658    OWR50182.1    KPJ18017.1    NWSH01003255    PCG66681.1    KZ150247    PZC71860.1    PCG66685.1    NWSH01003566    PCG66099.1    KZ150517    PZC70622.1    PZC71857.1    OWR50181.1    PZC70621.1    PCG66100.1    ODYU01013295    SOQ60002.1    EF600052    ABU98617.1    ODYU01012270    SOQ58486.1    SOQ58485.1    MF683358    ATU82499.1    GBHO01018617    JAG24987.1    GDHC01015627    JAQ03002.1    GBHO01033826    JAG09778.1    GDJX01002923    JAT65013.1    GECU01010695    JAS97011.1    GEBQ01022916    JAT17061.1    GEBQ01024993    JAT14984.1    GEBQ01008045    JAT31932.1    GECZ01025473    JAS44296.1    FX983003    BAS30471.1    KK854485    PTY16269.1    GG666487    EEN64335.1    NEDP02000926    OWF54729.1    GEBQ01029151    JAT10826.1    GEDC01027798    JAS09500.1    EEN64338.1    AFFK01020108    GECU01022662    GECU01019782    JAS85044.1    JAS87924.1    KB201701    ESO95124.1    LNIX01000001    OXA63990.1    GECU01022084    JAS85622.1    GFAH01000703    JAV47686.1    JH431850    LJIJ01000029    ODN05174.1    KB201931    ESO93325.1    NIVC01002056    PAA61235.1    NIVC01002351    PAA58643.1    LJIJ01000185    ODN00825.1    LNIX01000008    OXA51100.1    JH816663    EKC34624.1    NEDP02000192    OWF56459.1    HACA01007542    CDW24903.1    EEN64341.1    HACG01012134    CEK58999.1    EEN64339.1    EEN64340.1    LNIX01000002    OXA59724.1    HACA01033304    CDW50665.1    JH431434    JH431981    GECU01033736    JAS73970.1    HACA01033303    CDW50664.1    GEBQ01019079    JAT20898.1    GECU01008864    JAS98842.1    GECU01024566    JAS83140.1    LSMT01000044    PFX30874.1    LNIX01000013    OXA47255.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000007151    UP000218220    UP000001554    + More
UP000242188    UP000085678    UP000030746    UP000198287    UP000094527    UP000095280    UP000215902    UP000005408    UP000076420    UP000225706   

PRIDE

H9J9T8   

Pfam

PF00587   tRNA-synt_2b        + More
PF03129   HGTP_anticodon
PF00458   WHEP-TRS
PF09180   ProRS-C_1
PF03357   Snf7
PF10274   ParcG

Interpro

IPR036621   Anticodon-bd_dom_sf        + More
IPR002314   aa-tRNA-synt_IIb       
IPR009068   S15_NS1_RNA-bd       
IPR000738   WHEP-TRS_dom       
IPR016061   Pro-tRNA_ligase_II_C       
IPR006195   aa-tRNA-synth_II       
IPR004154   Anticodon-bd       
IPR017449   Pro-tRNA_synth_II       
IPR005024   Snf7_fam       
IPR019399   Parkin_co-regulated_protein       

SUPFAM

SSF64586   SSF64586        + More
SSF47060   SSF47060       

Gene 3D

3.30.110.30     3.40.50.800    

ProteinModelPortal

A0A348ARE3   H9J9T8   A0A194Q7G6   A0A194RJL1   A0A194RPR4   A0A212F8X0   + More
A0A194RKF0   A0A2A4J3W2   A0A2W1BGD7   A0A2A4J3P8   A0A2A4J2K5   A0A2W1B0B8   A0A212F8Y2   A0A2W1B5C2   A0A2A4J3S8   A0A2H1X436   B1NLD7   A0A2H1WZU4   A0A2H1WZI2   A0A2K8JLE3   A0A0A9XW04   A0A146L760   A0A0A9WTE6   A0A1D1ZDW1   A0A1B6JCM2   A0A1B6L089   A0A1B6KUQ9   A0A1B6M7K5   A0A1B6F1Y6   A0A3G9CLZ2   A0A2R7W9Q1   C3Y5T8   A0A210R159   A0A1B6KHA3   A0A1B6C8E0   C3Y5U1   T1IXM1   A0A1S3JDE4   A0A1B6IDP6   V4C0Z0   A0A226F3Q4   A0A1B6IFE9   A0A1W7R968   T1J4X8   A0A1D2NIT9   V4ADY4   A0A1I8GH03   A0A1I8HZZ2   A0A1D2N6X1   A0A1I8ITE8   A0A226E1C8   K1QTT1   A0A210R5Y3   A0A0K2TFV4   C3Y5U4   A0A0B6YRW2   A0A2C9KD43   C3Y5U2   C3Y5U3   A0A226ERP2   A0A0K2VK12   T1ISJ9   T1JA23   A0A1B6HGZ3   A0A0K2VJM8   A0A1B6LB36   A0A1B6JIB1   A0A1B6I8C4   A0A1S3IAF0   A0A2B4SJL6   A0A226DNZ2  

KEGG

101739721    no KO assigned | (RefSeq) uncharacterized LOC101739721

GO

GO:0005524   GO:0005737   GO:0004827   GO:0006433   GO:0016021   GO:0016874   GO:0007034  

SignalP

Position:   1 - 16,         Likelihood:  0.950551

 

 

Length:

289

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.84983

Exp number, first 60 AAs:

3.64549

Total prob of N-in:

0.16711

outside

1  -  289

 

 

Pi

158.848229

Theta

138.368061

Tajima's D

-1.032289

CLR

0.824236

CSRT

0.131393430328484

Interpretation

Uncertain