Silkworm Genome Informatics Database

Gene

KWMTBOMO03572

Pre Gene Modal

BGIBMGA006304

Annotation

C3_and_PZP-like_alpha-2-macroglobulin_domain-containing_protein_8_[Papilio_xuthus]

Location

Bomo_Chr6(+):12564457-12654576 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 1.268

CDS

ATGAAATACTTCAATCAATTAATTGAACTGAAATATTTAAGTTCGGTCAGCTACGGAATAATTCCGCTCAAGATCCCCTCGTCGCCAGCTACACACTGCACCCTTCACACCACGGTTGGATGCGTTGGGAACGACGAATGTACAGCGAAGAGTCACAGCGTTATAAGATTGTTAGGGCCGGTCAGAGATGTAATAGTGAGGCCCGCTCGCCATCACTACCGACCCGGAGAGATGATTACATTCTGGATACTTGCTCTCGATCATGACCTTCGTCTGGTACGCGAGGAGCTGGCGCATGTAGCCCTTAGTGATCCTGCTGGCACTAAAGTGGCTATTTGGGAGGAACTGTCTATGGATGAAGGTGTTCAGAAACTCAGCGCCATTTTAGCACTGGGTGCGCGTTCTGGGACATGGCGCATCGAAGCTCGTTGCGGAGGGGGTTCAGCTCGAGTAGACCTTACCGTTGGCTCCGGAGCCTCAGGGTCTACTGCAGCTGCTCCAGCTGGTGAACAGCATTACGTTGAGCTGAGGTTTGCTGATAGCATGAGGAGGAGATACAAGCCTGGACTACCTTTTGTTGGAAGGGTTGAAGCTATGAGTACCGAGAAACGGGTCCGAGTTCGAGTGAAGCTCTACGATGACGAGACTGACATCTACAGTCAAGATATTGACATGTCTACAGGGGAAGGAGGCTTCATAGTACCAACCGTCATGGCGGATGCGCCGTATGTTAATTTGCAGGCTGAATTGGTTGCTGTTGAAGGCAAAGAGATTGAAACACACTACGTGCTGGCTCGAGAGAGAATCAAGAGATGGAATTCCACATCGAAATGCTACCTTCTCGTCGAGAATTTACCGACACCGTTACAGGCCGGAAACATAGCAAGTGCCAGTGTATGGTCCTCATGTGGGTGCCGTCAACGACTCTTGGCGGCAGTGACGAGTGGAGGTCGCGCCCTCCACTGGGCGGCTGTTCCCGCACCCCCAGCCAATGACTCCGATCTGTGCCGCTTCAATTATACTTTCCCGGTAACAGCAGACATGGCGCCGATGAGTTCTCTCCTCGTTTATTACGTCACCGAGGCTGGTGAACCAGTCAGCGACGTGGCCAGTTTCCATGTCCGCCTCCTTCACAAGGAAGTGGCAGTGGCAGTCGAAGAAAGAAGATGGTGGTATCCCAGAGCTGTATTACAACTTCGAGTTCTAGCTCCCCCAGATTCAACAATGTGCCTGATCGGTGCTCGGACTCCTCCCGATACACGATTTGATCCTCATCAAACGAGCACCGACCACGAAGATCAACCGGGCCCGGAATTCGTGTCGGCTGGGGTTTCTCTGTTCGTTGGTGGTGGGACCTGCGGAGGAGGAGTTCTGTACAGACAGAGAACCGCACCAGCTCCGTGTGCGCCAGCTCAATTGGTACCTCCCGCAAGTCACGACAGGCTCTGGATGTGGAAGTGCTTCAATTATACCTCTCAATTGTCTACTGATGGAGTAACCATCTCAGCACCCTCGGAAGCAGGCCGCTGGTCTCTCTGGGCTCTGTCACTCTCCAACCGCGGTCTTCGCTTCTCCACTCCGAAGACCATCAACGTGTTCAGGCCTATCCAGCTGGACTTCTCTTTACCTCCTGCGTTAAAAGTCGGAGAGACCGTAGAAATCGATGTGAAGATAACCAACAACATTAATAATTGCATGGACGTAACTGCTTTACTAGCGTTAAGTGCTGGGGCAGCGTTCGCAAGCACTGGAGCCCTTTATGTTACGGAGAGATTGAGGTTAGGTCCACGTGGTGGAACCCAGCTGGTCGTAAGAGTCGCAGTCAACACTCCCGGAAGAAAAAACATTACAGCAGACAAGAACAAGAGCATACCCAGATCCCGTAAACCAAATATCTTTAACGAAAACGCTGACTTCGACCGGGAAGCGAATTTGGAAGTCGTGTTACAGTTGTCAGGCTCATTCAACCACCAAATCAACGATGCGATCGTCTTGAATATTTAA

Protein

MKYFNQLIELKYLSSVSYGIIPLKIPSSPATHCTLHTTVGCVGNDECTAKSHSVIRLLGPVRDVIVRPARHHYRPGEMITFWILALDHDLRLVREELAHVALSDPAGTKVAIWEELSMDEGVQKLSAILALGARSGTWRIEARCGGGSARVDLTVGSGASGSTAAAPAGEQHYVELRFADSMRRRYKPGLPFVGRVEAMSTEKRVRVRVKLYDDETDIYSQDIDMSTGEGGFIVPTVMADAPYVNLQAELVAVEGKEIETHYVLARERIKRWNSTSKCYLLVENLPTPLQAGNIASASVWSSCGCRQRLLAAVTSGGRALHWAAVPAPPANDSDLCRFNYTFPVTADMAPMSSLLVYYVTEAGEPVSDVASFHVRLLHKEVAVAVEERRWWYPRAVLQLRVLAPPDSTMCLIGARTPPDTRFDPHQTSTDHEDQPGPEFVSAGVSLFVGGGTCGGGVLYRQRTAPAPCAPAQLVPPASHDRLWMWKCFNYTSQLSTDGVTISAPSEAGRWSLWALSLSNRGLRFSTPKTINVFRPIQLDFSLPPALKVGETVEIDVKITNNINNCMDVTALLALSAGAAFASTGALYVTERLRLGPRGGTQLVVRVAVNTPGRKNITADKNKSIPRSRKPNIFNENADFDREANLEVVLQLSGSFNHQINDAIVLNI

Uniprot

A0A194QAE0 A0A194R6R2 D6W8H2 A0A2J7RE73 T1I3M0 A0A2H8TIF1 + More
J9M2R1 A0A2S2QAC3 U4UUT7 H3DDC7

Pubmed

26354079 18362917 19820115 23537049 15496914

EMBL

KQ459249 KPJ02399.1 KQ460647 KPJ13209.1 KQ971312 EEZ99236.2 + More
NEVH01005277 PNF39125.1 ACPB03012340 ACPB03012341 ACPB03012342 GFXV01001667 MBW13472.1 ABLF02028976 ABLF02028977 ABLF02028978 ABLF02028983 ABLF02028985 ABLF02028986 GGMS01005484 MBY74687.1 KB632375 ERL93925.1

Proteomes

UP000053268 UP000053240 UP000007266 UP000235965 UP000015103 UP000007819 + More
UP000030742 UP000007303

Pfam

PF07703   A2M_BRD        + More
PF00207   A2M
PF07678   TED_complement
PF07677   A2M_recep
PF12248   Methyltransf_FA
PF01835   MG2
PF17789   MG4
PF17791   MG3

Interpro

IPR001599   Macroglobln_a2        + More
IPR009048   A-macroglobulin_rcpt-bd
IPR011625   A2M_N_BRD
IPR008930   Terpenoid_cyclase/PrenylTrfase
IPR011626   Alpha-macroglobulin_TED
IPR036595   A-macroglobulin_rcpt-bd_sf
IPR013783   Ig-like_fold
IPR022041   Methyltransf_FA
IPR002890   MG2
IPR019742   MacrogloblnA2_CS
IPR041813   A2M_TED
IPR014756   Ig_E-set
IPR040839   MG4
IPR041555   MG3

SUPFAM

SSF49410   SSF49410        + More
SSF48239   SSF48239
SSF81296   SSF81296

Gene 3D

2.60.40.690 2.60.40.10

CDD

cd02897 A2M_2

ProteinModelPortal

A0A194QAE0 A0A194R6R2 D6W8H2 A0A2J7RE73 T1I3M0 A0A2H8TIF1 + More
J9M2R1 A0A2S2QAC3 U4UUT7 H3DDC7

PDB

2P9R E-value=7.7844e-05, Score=112

KEGG

105842674 no KO assigned | (RefSeq) uncharacterized LOC105842674

GO

GO:0005615 GO:0004866 GO:0003676 GO:0015074 GO:0006468 GO:0016020 GO:0051103 GO:0005524 GO:0008270 GO:0042555 GO:0048384

Length:

667

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.04943999999999

Exp number, first 60 AAs:

0.0166

Total prob of N-in:

0.00327

outside

1 - 667

Pi

240.30725

Theta

169.977106

Tajima's D

1.118583

CLR

0.349162

CSRT

0.693215339233038

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics