Silkworm Genome Informatics Database

Gene

KWMTBOMO03564

Pre Gene Modal

BGIBMGA002389

Annotation

PREDICTED:_mucin-2-like_[Amyelois_transitella]

Location

Bomo_Chr6(+):12235932-12261242 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.495

CDS

ATGGCTGGAAGTTACATTGTCAACGTGCCTAAATTGAAAGGTCGCGAAAACTTCGACGAGTGGGCGTTTGCAGCTGAACATTTTTTGATGTTGGAAGGTGTCGATATTCATAAGTTAGAATCATCAACCGATGCTAGTTCTATTGATGAAAGAAAAGCTAAAGCTAAACTTATTATGACAATTGACTCTTCAATTTATGTTCACATTAAAAACGAGCAAACAGTACAAGGTGTGTGGAAGCGTTTAAAAGCCCTGTACGATGACTGTGGCTTTACGCGTCGCATCAGTCTACTTCGTCAGCTAATATCAATTCGATTAGAAGATAGCGAATCAATGGAAGCATATGTAACGCAAATGGTCGACACTGCACAAAAACTTAAAGGTACGGGTTTTCAGATCACTGATGAGTGGATCGGTTCACTATTATTAGCGGGCCTAACAGATACATTTGCTCCTATGATAATGGCCATTGAACATTCTGGATTAGCCATCAGTACGGATGCCATCAAGTCAAAATTACTGGACATGAGTTCAGAAGTTGGCAACACTGCAACTAACAATGCCTTTTTGTCGAAAGTAAGTCAGATGATTCGTAATGGAAACAAAGTGAGCTTCGAAGAAGACGTTTGTTACATACGCAATCGACAGAATGTGCTGGTAGGAAAAGCAAACCTGGTGAATGGAGTCTATAAATTGGACATTAAGTCAGACAGTTTGTTCGCGTGCTCAGCCACAACTGTGACTAGTGAGATATGGCATCGAAGATTAGGACACATTAACAGTAGAAGCTTGAATATTATGAAGAATGGTGCTGTGGATGGGATATCATACATGGATAAAGCTGAAATTGATATGTCCAAGTGCATCATATGCTGTGAAGGAAAACAGTCAAGGTTGCCATTTTCACATAAAGGTACGAGAAGTGAAAATGTGCTTGAACTTGTTCATGCAGATGTCTGTGGACCCATGGAACAACCTTCTATTGGACTATCAAAGTATTTTTTGCTTTTTGTAGATGACTACAGTAGAATGGCATTTGTGTTTTTTCTCAAAGCCAAGAACCAAGTTTTCAAATATTTTAAAGAGTTCAAAACTCTGGTTGAGACACAGACAGGCAGAAAACTAAAAGCCTTAAGGACAGATAATGGTGGAGAGTTTTGTTCGCTAGAATTTGATGAGTTTTTGAAGAAAAATGGCATAGTACATCAAACAACAAACCCTCATACACCAGAACAGAATGGCCTGTGTGAAAGACTTAATAGAACTGTCGTGGAGAGAGCTCGGTGTCTTCTGTTTGAAGCAGGCCTAGATAAAAAGTTTTGGGCCGAAGCAATCAACACAGCAGTCTATTTACGAAATAGAACATTGGCAGCAGGACTTCAGAAAACACCTTATGAAATATGGAGTGGTAAAAAGCCAAATCTAAGTCATATACGGATATTTGGTAGTCCTGCAATGGTCCATGTCCCCAAAGCAAAGCGGACTAAATGGAACAAGAAGGCCAATGAACACATCCTGATTGGATACTCAGAGAGTACCAAAGGATACAGGCTGTACAATGTAAAAACAAAAAATATTACCACTAGCAGGGATGTTGTTATCATGGAGAAAATCAACGACACAGATATGATACAAGCAGTAGTGGAAGAAAAAGAAACTATTCCAAGTGAAGAAGGAATACAAAAATGTGCTGTGACAAGTGAAGATTCCACTTGTGACTCACTAAATAGCACATACATGACAGATGATGCTACATATGTACCAGATGATACCAGTACCACCAGCTCAGATGAATTCTGTGATAGTAAATCGAATCACAAGTCAGAAAATCTGCAGCCAATAATTAAGGTGGAAAAGAGGACTAGGAAGAAACCAGACTGGTATGGGTACAATAACATATGTCAGAGCAGTGAGGAGGTGGACGACAATCTTCTCACTTATGAGGATGTAATGAGAGGATCAGAACAAGAAGAATGGTCAAAAGCCATGAAAGAGGAAATACAATCTTTCCATCAGAATGATGCTTGGGAGTTAGTAGACAGACCCAGTGGTGAAAATATTGTGGCATGCAAATGGGTGTATAAAAAGAAACTTAACAGTGACAACTCAGTGAGATATAGGGCACGGTTGGTTGCGAAGGGTTTCAGCCAGAGACAGGGTATAGACTTTAAAGAAACTTTTTCCCCAGTGCTAAAATATTCCACTTTAAAACTGTTATTTGCTATTAGTGTTAACTTGAATCTTAGCATAACCCATTTGGATGTAACGACGGCCTTTTTGAATGGTCACCTAGATGAAACTGTTTTTATGCAATTGCCTCAGAGTTTTGAATGTAAACCTAATGCTGATAAAGTCTTGAAATTGAAAAAGGCCATTTATGGACTAAAACAGTCAGCGAGGGCCTGGCGAATTTCGACTACCGGGGGACCACTAGCCCTTCTACAGGCGCATGATGTGGTCGCCAGAGAAGTGTACGGTGAGGAGTCATTGCGTGCCTCTCCGCCGCCGGTCAACGGTCGCACGACGGCACCGCCGCCCGAAGAGGAAGACGACGCCGAACCCGAATTCGAGAACGTGACCAGGGTGCGCCTCGTGCAGTTCCAGAAAAACACCGACGAGCCAATGGGAATTACTCTGAAACTAGCGGACGACGGACGTTGCATCGTTGCTCGTATTATGCACGGCGGTATGATACATCGCCAGGCGACGCTGCATGTCGGTGACGAGATTAAAGAGATTAACGGAACGCCTGTCGCAAATCAATCTGTCGCTCAACTACAAAGAATGCTGCGCGAGGCTCGCGGCTCCGTCACTTTCAAGATCGTACCTTCCTACCGCTCGGCACCACCACCCTGCGAGCTTTTCCGGATAAAGCCTTCGCCCGTGCTAATATTCGTTCGAGCGCAGTTTGATTACGATCCCTTGGAAGACGAACTAATCCCGTGTGCTCAAGCAGGCATCGCCTTCAACACCGGCGACATATTGCAGGTTAGTTGTGTATTATGGGTATAA

Protein

MAGSYIVNVPKLKGRENFDEWAFAAEHFLMLEGVDIHKLESSTDASSIDERKAKAKLIMTIDSSIYVHIKNEQTVQGVWKRLKALYDDCGFTRRISLLRQLISIRLEDSESMEAYVTQMVDTAQKLKGTGFQITDEWIGSLLLAGLTDTFAPMIMAIEHSGLAISTDAIKSKLLDMSSEVGNTATNNAFLSKVSQMIRNGNKVSFEEDVCYIRNRQNVLVGKANLVNGVYKLDIKSDSLFACSATTVTSEIWHRRLGHINSRSLNIMKNGAVDGISYMDKAEIDMSKCIICCEGKQSRLPFSHKGTRSENVLELVHADVCGPMEQPSIGLSKYFLLFVDDYSRMAFVFFLKAKNQVFKYFKEFKTLVETQTGRKLKALRTDNGGEFCSLEFDEFLKKNGIVHQTTNPHTPEQNGLCERLNRTVVERARCLLFEAGLDKKFWAEAINTAVYLRNRTLAAGLQKTPYEIWSGKKPNLSHIRIFGSPAMVHVPKAKRTKWNKKANEHILIGYSESTKGYRLYNVKTKNITTSRDVVIMEKINDTDMIQAVVEEKETIPSEEGIQKCAVTSEDSTCDSLNSTYMTDDATYVPDDTSTTSSDEFCDSKSNHKSENLQPIIKVEKRTRKKPDWYGYNNICQSSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWELVDRPSGENIVACKWVYKKKLNSDNSVRYRARLVAKGFSQRQGIDFKETFSPVLKYSTLKLLFAISVNLNLSITHLDVTTAFLNGHLDETVFMQLPQSFECKPNADKVLKLKKAIYGLKQSARAWRISTTGGPLALLQAHDVVAREVYGEESLRASPPPVNGRTTAPPPEEEDDAEPEFENVTRVRLVQFQKNTDEPMGITLKLADDGRCIVARIMHGGMIHRQATLHVGDEIKEINGTPVANQSVAQLQRMLREARGSVTFKIVPSYRSAPPPCELFRIKPSPVLIFVRAQFDYDPLEDELIPCAQAGIAFNTGDILQVSCVLWV

Uniprot

A0A0V1APU2

EMBL

JYDH01000330 KRY26801.1

Proteomes

UP000054776

Pfam

PF00665   rve        + More
PF13961   DUF4219
PF07727   RVT_2
PF13976   gag_pre-integrs

Interpro

IPR001584   Integrase_cat-core        + More
IPR039537   Retrotran_Ty1/copia-like
IPR013103   RVT_2
IPR012337   RNaseH-like_sf
IPR025314   DUF4219
IPR025724   GAG-pre-integrase_dom
IPR036397   RNaseH_sf

SUPFAM

SSF53098 SSF53098

Gene 3D

3.30.420.10

ProteinModelPortal

A0A0V1APU2

PDB

1KWA E-value=4.4075e-36, Score=383

KEGG

101744976 K06103 calcium/calmodulin-dependent serine protein kinase [EC:2.7.11.1] | (RefSeq) peripheral plasma

GO

GO:0003676 GO:0000943 GO:0015074 GO:0005515 GO:0006468 GO:0016020 GO:0051103 GO:0005524 GO:0008270 GO:0042555 GO:0048384

PANTHER

PTHR11439

Length:

1003

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.13334

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00599

outside

1 - 1003

Pi

230.645231

Theta

165.69263

Tajima's D

0.830504

CLR

0.525304

CSRT

0.608269586520674

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree