Gene

KWMTBOMO03557

Pre Gene Modal

BGIBMGA006296

Annotation

PREDICTED:_lopap_[Papilio_machaon]

Location

Bomo_Chr6(+):11971650-11983888      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.146 PlasmaMembrane   Reliability : 1.787

CDS

ATGGTGAAGTTTTTAATGTTTATTGTGTTTTTGTTATTTTCGAACGTGGTGATCGGAAAAATTGTAAACAAAAGAAAGTGCCCAGAGGTGCGAGCTGTACCACACTTCGATTTGCCCGGGATACTGGGAGACTGGTATGTGGTTGAGTACTACGCGAGTGCTGAAGAAGCGCTCTCATACAGTTGTATGAAAGCCGTGTTTACTCAGGACGATCACGTACCCGCCATAGATGGTACAATAGAGTGGACGCCAGGAGTGACCATGAACTTTACGTACCGGTTCGCGGACGACCCCATAGGCGAGACACTCTTCGGAAACATTACCTGGAAGATCGATCTGAACCAGCCTGCGCACTGGACACACGCTGAAAGCACATATGACGGCATTTACAATACGTACGTGATAGACACAGAATATAAAACTTGGGCGTTACTGCTGCACTGCGCGGAGCAGACGGAAGGCGCTCGTTACCTCACCGCATTCGTTCTCTCCAGGACAACGAAACTGCAGAAGAACGTGATGGCGTACCTGCGAGACAAGCTGCCAAGATTCGAAGTGGACATCAACTATGTGTTCGCGATCCCTCACGACGACTGCGCCGTGAAACCCCCAAACCCTAACTTCGGACCCTTGATGCTGGATGCCCAGAGCAAGAAACTGATAAGACCATCTGTCAGTTACAAAGTCTTCGGTCATTAA

Protein

MVKFLMFIVFLLFSNVVIGKIVNKRKCPEVRAVPHFDLPGILGDWYVVEYYASAEEALSYSCMKAVFTQDDHVPAIDGTIEWTPGVTMNFTYRFADDPIGETLFGNITWKIDLNQPAHWTHAESTYDGIYNTYVIDTEYKTWALLLHCAEQTEGARYLTAFVLSRTTKLQKNVMAYLRDKLPRFEVDINYVFAIPHDDCAVKPPNPNFGPLMLDAQSKKLIRPSVSYKVFGH

Similarity

Belongs to the calycin superfamily. Lipocalin family.

Uniprot

H9J9V1   A0A2H1WKQ0   A0A0N1I8Q8   A0A212F0V5   A0A2A4J0M7   A0A194QAF1   + More
A0A067QUM8   A0A1W4WMU8   N6T527   A0A088AQU4   A0A2A3EDB8   A0A1B6HLV1   A0A1B6F8X6   D6WEM3   A0A1Q3FS32   K7J2A5   A0A232F565   E2BVR3   A0A026X0W6   A0A195EZA2   A0A182GCV2   A0A1Y1MUQ1   A0A151WZF6   F4X2A3   E9IHT8   A0A151J6S3   A0A158P389   A0A154PE27   A0A023EKX8   A0A195CEV6   Q17HX8   A0A1I8NX44   B0XGR3   A0A1B6LP33   E0VTZ2   A0A1A9WCJ5   W8BSM6   A0A1I8MGX2   A0A1S4F1Y0   A0A182PM69   A0A0K8W233   A0A034W1U3   A0A0C9R2X2   A0A2M4DP35   A0A1A9XDV9   A0A0L0BRE4   A0A0M4EUT1   B4L1R2   A0A182V7F6   A0A0P4VLH9   T1HNH3   A0A182N0Y6   B4MEJ2   A0A084VIU5   A0A182XY43   A0A0V0GCT9   A0A1S3DGM5   A0A182RJ22   A0A182M8Y1   A0A182FM96   A0A182VVB8   A0A182J456   B4JM62   A0A3B0K5N9   A0A195BVF1   A0A182TQ91   A0A182X5B8   A0A0N0BDQ0   A0A1B0CVH5   A0A2S2RAM8   B4H3R8   W5JPG1   Q29JB5   A0A0A9WEG4   A0A182I9L8   A0A224XWG2   A0A182SR27   B3NU89   Q9VYU5   Q962B6   Q95R53   C4IY11   A0A1W4VZQ1   B4R378   B4Q1Q9   A0A2S2PG53   C4WY52   B4IK63   A0A1J1HHU7   B0XLY2   A0A182Q0S1   B3MQG1  

Pubmed

19121390    26354079    22118469    24845553    23537049    18362917    + More
19820115    20075255    28648823    20798317    24508170    26483478    28004739    21719571    21282665    21347285    24945155    17510324    20566863    24495485    25315136    25348373    26108605    17994087    27129103    24438588    25244985    20920257    23761445    15632085    25401762    26823975    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304   

EMBL

BABH01025900    ODYU01009323    SOQ53660.1    KQ460324    KPJ15845.1    AGBW02011024    + More
OWR47353.1    NWSH01004146    PCG65429.1    KQ459249    KPJ02409.1    KK852992    KDR12765.1    APGK01043776    KB741017    KB631644    ENN75274.1    ERL84958.1    KZ288272    PBC29735.1    GECU01032034    JAS75672.1    GECZ01023215    JAS46554.1    KQ971326    EFA00870.1    GFDL01004802    JAV30243.1    AAZX01008245    NNAY01000914    OXU25944.1    GL450951    EFN80221.1    KK107037    EZA61950.1    KQ981905    KYN33635.1    JXUM01054857    JXUM01054858    JXUM01054859    KQ561840    KXJ77379.1    GEZM01020141    JAV89371.1    KQ982649    KYQ53147.1    GL888568    EGI59438.1    GL763294    EFZ19844.1    KQ979796    KYN19085.1    ADTU01007866    KQ434869    KZC09450.1    GAPW01003763    JAC09835.1    KQ977935    KYM98756.1    CH477244    EAT46299.1    DS233058    EDS27786.1    GEBQ01014524    JAT25453.1    DS235777    EEB16848.1    GAMC01006643    GAMC01006642    JAB99913.1    GDHF01007178    GDHF01002600    JAI45136.1    JAI49714.1    GAKP01010293    GAKP01010292    JAC48659.1    GBYB01010579    JAG80346.1    GGFL01015134    MBW79312.1    JRES01001467    KNC22650.1    CP012528    ALC48897.1    CH933810    EDW06715.2    GDKW01001328    JAI55267.1    ACPB03021429    CH940664    EDW62967.1    ATLV01013409    KE524855    KFB37889.1    GECL01000187    JAP05937.1    AXCM01007137    CH916371    EDV91823.1    OUUW01000003    SPP78778.1    KQ976403    KYM92240.1    KQ435859    KOX70498.1    AJWK01030574    AJWK01030575    GGMS01017846    MBY87049.1    CH479207    EDW31019.1    ADMH02000879    ETN64775.1    CH379063    EAL32386.2    GBHO01037466    GBHO01037465    GBHO01037464    GBRD01017153    GDHC01020358    GDHC01005264    GDHC01004085    JAG06138.1    JAG06139.1    JAG06140.1    JAG48674.1    JAP98270.1    JAQ13365.1    JAQ14544.1    APCN01001003    GFTR01003564    JAW12862.1    CH954180    EDV46004.1    AE014298    AAF48091.2    AAN09297.1    AHN59607.1    AHN59608.1    AY038185    AAK72697.1    AY061609    AAL29157.1    BT083442    ACR10174.1    CM000366    EDX17680.1    CM000162    EDX02484.2    GGMR01015788    MBY28407.1    ABLF02040099    ABLF02040119    AK343024    BAH72822.1    CH480851    EDW51435.1    CVRI01000004    CRK87467.1    DS234934    EDS35550.1    AXCN02001373    CH902621    EDV44587.1   

Proteomes

UP000005204    UP000053240    UP000007151    UP000218220    UP000053268    UP000027135    + More
UP000192223    UP000019118    UP000030742    UP000005203    UP000242457    UP000007266    UP000002358    UP000215335    UP000008237    UP000053097    UP000078541    UP000069940    UP000249989    UP000075809    UP000007755    UP000078492    UP000005205    UP000076502    UP000078542    UP000008820    UP000095300    UP000002320    UP000009046    UP000091820    UP000095301    UP000075885    UP000092443    UP000037069    UP000092553    UP000009192    UP000075903    UP000015103    UP000075884    UP000008792    UP000030765    UP000076408    UP000079169    UP000075900    UP000075883    UP000069272    UP000075920    UP000075880    UP000001070    UP000268350    UP000078540    UP000075902    UP000076407    UP000053105    UP000092461    UP000008744    UP000000673    UP000001819    UP000075840    UP000075901    UP000008711    UP000000803    UP000192221    UP000000304    UP000002282    UP000007819    UP000001292    UP000183832    UP000075886    UP000007801   

PRIDE

H9J9V1    Q9VYU5    Q962B6    Q95R53    C4IY11   

Pfam

PF07137   VDE        + More
PF00061   Lipocalin
PF07707   BACK
PF00651   BTB

Interpro

IPR012674   Calycin        + More
IPR022272   Lipocalin_CS       
IPR010788   VDE       
IPR000566   Lipocln_cytosolic_FA-bd_dom       
IPR000210   BTB/POZ_dom       
IPR011333   SKP1/BTB/POZ_sf       
IPR011705   BACK       

SUPFAM

SSF50814   SSF50814        + More
SSF54695   SSF54695       

Gene 3D

2.40.128.20    

ProteinModelPortal

H9J9V1   A0A2H1WKQ0   A0A0N1I8Q8   A0A212F0V5   A0A2A4J0M7   A0A194QAF1   + More
A0A067QUM8   A0A1W4WMU8   N6T527   A0A088AQU4   A0A2A3EDB8   A0A1B6HLV1   A0A1B6F8X6   D6WEM3   A0A1Q3FS32   K7J2A5   A0A232F565   E2BVR3   A0A026X0W6   A0A195EZA2   A0A182GCV2   A0A1Y1MUQ1   A0A151WZF6   F4X2A3   E9IHT8   A0A151J6S3   A0A158P389   A0A154PE27   A0A023EKX8   A0A195CEV6   Q17HX8   A0A1I8NX44   B0XGR3   A0A1B6LP33   E0VTZ2   A0A1A9WCJ5   W8BSM6   A0A1I8MGX2   A0A1S4F1Y0   A0A182PM69   A0A0K8W233   A0A034W1U3   A0A0C9R2X2   A0A2M4DP35   A0A1A9XDV9   A0A0L0BRE4   A0A0M4EUT1   B4L1R2   A0A182V7F6   A0A0P4VLH9   T1HNH3   A0A182N0Y6   B4MEJ2   A0A084VIU5   A0A182XY43   A0A0V0GCT9   A0A1S3DGM5   A0A182RJ22   A0A182M8Y1   A0A182FM96   A0A182VVB8   A0A182J456   B4JM62   A0A3B0K5N9   A0A195BVF1   A0A182TQ91   A0A182X5B8   A0A0N0BDQ0   A0A1B0CVH5   A0A2S2RAM8   B4H3R8   W5JPG1   Q29JB5   A0A0A9WEG4   A0A182I9L8   A0A224XWG2   A0A182SR27   B3NU89   Q9VYU5   Q962B6   Q95R53   C4IY11   A0A1W4VZQ1   B4R378   B4Q1Q9   A0A2S2PG53   C4WY52   B4IK63   A0A1J1HHU7   B0XLY2   A0A182Q0S1   B3MQG1  

KEGG

101739113    no KO assigned | (RefSeq) uncharacterized LOC101739113

GO

GO:0016021   GO:0046422   GO:0005737   GO:0000302   GO:0006629  

SignalP

Position:   1 - 19,         Likelihood:  0.996390

 

 

Length:

232

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

11.92925

Exp number, first 60 AAs:

11.92489

Total prob of N-in:

0.02898

POSSIBLE N-term signal

sequence

outside

1  -  232

 

 

Pi

225.569895

Theta

163.857772

Tajima's D

1.191418

CLR

0.148178

CSRT

0.715014249287536

Interpretation

Uncertain