Gene

KWMTBOMO03556

Pre Gene Modal

BGIBMGA010007

Annotation

putative_DNA_helicase_[Cotesia_vestalis_bracovirus]

Location

Bomo_Chr6(+):11930900-11933078      View in EpiBrowser

Full name

ATP-dependent DNA helicase      

Location in the cell

Mitochondrial   Reliability : 1.233 PlasmaMembrane   Reliability : 1.258

CDS

ATGCCACGTTATTATACTTGGAATGCTTCATCGAAGAATTTTCAAAGACGGAAGCAAGGCGATGCGGTTCCTGGGTATCCAGATGTGCGTTCTACTGATGCTCTTGGTCGTATGTATACAGTTCATCCAAAGAATAATGAATGTTTCTATTTGCGGTTGTTGCTGGTAAATGTGCGTGGGCCAACGTCATTTGAGTCACTACGAACTGTTAATGGTGTAATATTCCCAACATATCGTGCTGCATGTGAAGAATTGAAGTTATTAGAAAACGATAGTCATTGGGATACGACAATCGCTGAAGCCATTATCTCTGCATCTCCAAGTCAGATACGCACATTATTCGCTATCATAATTTCGACATGTTTTCCATCAAACCCATGTAACCTGTGGCACAAATACAAGGATAATATGTCAGAAGATATTTTACATCAAATTCGTGTCAGTTCCAGAAATCACGATATTGAGATGAATGAGGAGATACATAATCGTGCTTTACTCTTGATCGAAGATATGTGTTACCTCATGTGCGGTAATTTATTAATCAGGTTAGGAATGCCAGCACCATATCGTGAAATGAATGACGCATTTAATCGAGAATTGGAAAGGGAACGTGAATATGATCACCAGGAATTAGATTTAGTAGTTCAAACGAATGTACCCCTGTTGAATTACCAACAAAAGGAAGTTTATGATACTTTAATGAAGGCAATCGATGATGAAAATGGTGGTTTATATTTCCTAGATGCCCCTGGTGGAACTGGCAAGACATTCCTCATGTCATTAGTTTTAGCAACTGTTCGGGCGAGATTTAACATAGCGGTTGCAGTTGCTTCTTCTGGAATAGCAGCCACATTGTTAGAAGGATGCCGTACGGCTCATTCAGCTTTCAAATTACCGTTAAATCTTCAAACTATTGAAGAACCAACGTGTAATATTGCAAAACACTCAGCAATGGCCAAAGTTTTAGCGGTATCGAAAATCATCATCTGGGACGAATGCACAATGGCGCATAAACGTACTTAA

Protein

MPRYYTWNASSKNFQRRKQGDAVPGYPDVRSTDALGRMYTVHPKNNECFYLRLLLVNVRGPTSFESLRTVNGVIFPTYRAACEELKLLENDSHWDTTIAEAIISASPSQIRTLFAIIISTCFPSNPCNLWHKYKDNMSEDILHQIRVSSRNHDIEMNEEIHNRALLLIEDMCYLMCGNLLIRLGMPAPYREMNDAFNRELEREREYDHQELDLVVQTNVPLLNYQQKEVYDTLMKAIDDENGGLYFLDAPGGTGKTFLMSLVLATVRARFNIAVAVASSGIAATLLEGCRTAHSAFKLPLNLQTIEEPTCNIAKHSAMAKVLAVSKIIIWDECTMAHKRT

Catalytic Activity

ATP + H2O = ADP + H(+) + phosphate

Cofactor

Mg(2+)

Similarity

Belongs to the helicase family.

Uniprot

A0A1L7NV02   S4PSG3   F4ZH17   H9JGG9   E2AZ86   A0A3S2LQP6   + More
A0A0B7BQW2   A0A0B7BQV8   A0A3S2NR36   A0A0B7BTF0   X1X891   A0A0B7BRN8   X1WRV4   X1WU44   X1WQP7   A0A0A1WF35   A0A0C2BKN3   X1WUI1   A0A0C2G6A8   X1WPL7   A0A0C2G2C8   A0A0D6L4E4   A0A016W7D9   J9M4E0   A0A0C2DC56   A0A0C2CWG5   A0A0C2G6C2   A0A368FRT6   A0A368FI23   A0A368GPV9   A0A0C2GPE7   A0A016SC70   A0A0B7BRP2   A0A3S2NIC2   A0A0B7BU26   A0A087U8T2   A0A0D6LGL1   A0A0D6L8U7   A0A267GN76   A0A267GEW9   A0A267F5E2   A0A267GWL2   A0A267F4D8   A0A1B6FHF9   A0A368H513   A0A1S3DI71   A0A267F2R0   A0A182ERV7   X1WX02   X1X109   J9LFV8   A0A0C2DFS3   J9LSB3   A0A1S3T8U0   J9LB24   A0A267DHT9   A0A267EIS0   A0A267F6F6   A0A267FMY4   A0A267FG92   A0A267G6G0   A0A182EUU1   A0A267G464   A0A2C9JJ58   A0A267EUX6   A0A267F175   A0A267GBS1   A0A267GS15   A0A267ETE1   A0A267ELF5   A0A267GG99   A0A267GJF9   A0A267DCD1   A0A267DB74   A0A1I8JBS8   A0A2S2R387   A0A2S2QPJ4   A0A0L8HDK9   A0A267DIK3   A0A2H5SHM7   A0A267FCK1   A0A015KY09   A0A267ESS5   A0A2H5U846   A0A267H554   A0A267H341  

EC Number

3.6.4.12

Pubmed

23622113    21470650    19121390    20798317    25830018    25730766    + More
22919073    25384727    15562597    26392545   

EMBL

LC056060    BAW33744.1    GAIX01013838    JAA78722.1    HQ009558    AEE09607.1    + More
BABH01039432    GL444143    EFN61253.1    RSAL01000340    RVE42412.1    HACG01048804    CEK95669.1    HACG01048799    CEK95664.1    RSAL01000338    RVE42429.1    HACG01048801    CEK95666.1    ABLF02039404    HACG01048798    CEK95663.1    ABLF02017703    ABLF02041883    ABLF02039418    ABLF02041882    ABLF02015085    ABLF02015086    GBXI01016780    JAC97511.1    KN778727    KIH44308.1    ABLF02016067    ABLF02055484    KN739098    KIH54434.1    ABLF02016932    KN747262    KIH51216.1    KE126587    EPB66060.1    JARK01000714    EYC35207.1    ABLF02042290    KN726708    KIH67418.1    KN739487    KIH54222.1    KN743176    KIH52626.1    JOJR01000723    RCN34924.1    JOJR01001507    RCN30639.1    JOJR01000111    RCN45090.1    KN730521    KIH60924.1    JARK01001590    EYB87952.1    HACG01048803    CEK95668.1    RSAL01001639    RVE40746.1    HACG01048800    CEK95665.1    KK118751    KFM73771.1    KE125929    EPB66767.1    KE125664    EPB67478.1    NIVC01000229    PAA87485.1    NIVC01000366    PAA84583.1    NIVC01001359    PAA68995.1    NIVC01000111    PAA90396.1    NIVC01001445    PAA67902.1    GECZ01020386    JAS49383.1    JOJR01000020    RCN50729.1    NIVC01001486    PAA67379.1    UYRW01006776    VDM94602.1    ABLF02041819    ABLF02020814    ABLF02049665    ABLF02012908    ABLF02042833    KN726282    KIH68828.1    ABLF02024220    ABLF02041348    ABLF02018127    NIVC01004230    PAA48122.1    NIVC01002034    PAA61410.1    NIVC01001383    PAA68602.1    NIVC01000900    PAA75136.1    NIVC01001115    PAA72069.1    NIVC01000566    PAA80832.1    UYRW01009134    VDM97499.1    PAA80831.1    NIVC01001660    PAA65355.1    NIVC01001478    PAA67511.1    NIVC01000419    PAA83453.1    NIVC01000175    PAA88803.1    NIVC01001722    PAA64736.1    NIVC01001945    PAA62370.1    NIVC01000381    PAA84309.1    NIVC01000291    PAA86185.1    NIVC01004666    PAA46875.1    NIVC01004811    PAA46541.1    GGMS01015273    MBY84476.1    GGMS01010390    MBY79593.1    KQ418414    KOF87426.1    NIVC01003989    PAA49045.1    BDIQ01000091    GBC29771.1    NIVC01001160    PAA71495.1    JEMT01022708    EXX64911.1    NIVC01002018    NIVC01001743    NIVC01000051    PAA61561.1    PAA64516.1    PAA92464.1    BDIQ01000188    GBC50999.1    NIVC01000042    PAA92669.1    NIVC01000040    PAA92731.1   

Proteomes

UP000005204    UP000000311    UP000283053    UP000007819    UP000024635    UP000252519    + More
UP000054359    UP000215902    UP000079169    UP000077448    UP000271087    UP000087766    UP000076420    UP000095280    UP000053454    UP000236242    UP000022910   

PRIDE

H9JGG9   

Pfam

PF05970   PIF1        + More
PF14214   Helitron_like_N
PF02689   Herpes_Helicase

Interpro

IPR010285   DNA_helicase_pif1-like        + More
IPR027417   P-loop_NTPase       
IPR025476   Helitron_helicase-like       
IPR038765   Papain-like_cys_pep_sf       
IPR003653   Peptidase_C48_C       
IPR003840   DNA_helicase       
IPR003323   OTU_dom       

SUPFAM

SSF52540   SSF52540        + More
SSF54001   SSF54001       

ProteinModelPortal

A0A1L7NV02   S4PSG3   F4ZH17   H9JGG9   E2AZ86   A0A3S2LQP6   + More
A0A0B7BQW2   A0A0B7BQV8   A0A3S2NR36   A0A0B7BTF0   X1X891   A0A0B7BRN8   X1WRV4   X1WU44   X1WQP7   A0A0A1WF35   A0A0C2BKN3   X1WUI1   A0A0C2G6A8   X1WPL7   A0A0C2G2C8   A0A0D6L4E4   A0A016W7D9   J9M4E0   A0A0C2DC56   A0A0C2CWG5   A0A0C2G6C2   A0A368FRT6   A0A368FI23   A0A368GPV9   A0A0C2GPE7   A0A016SC70   A0A0B7BRP2   A0A3S2NIC2   A0A0B7BU26   A0A087U8T2   A0A0D6LGL1   A0A0D6L8U7   A0A267GN76   A0A267GEW9   A0A267F5E2   A0A267GWL2   A0A267F4D8   A0A1B6FHF9   A0A368H513   A0A1S3DI71   A0A267F2R0   A0A182ERV7   X1WX02   X1X109   J9LFV8   A0A0C2DFS3   J9LSB3   A0A1S3T8U0   J9LB24   A0A267DHT9   A0A267EIS0   A0A267F6F6   A0A267FMY4   A0A267FG92   A0A267G6G0   A0A182EUU1   A0A267G464   A0A2C9JJ58   A0A267EUX6   A0A267F175   A0A267GBS1   A0A267GS15   A0A267ETE1   A0A267ELF5   A0A267GG99   A0A267GJF9   A0A267DCD1   A0A267DB74   A0A1I8JBS8   A0A2S2R387   A0A2S2QPJ4   A0A0L8HDK9   A0A267DIK3   A0A2H5SHM7   A0A267FCK1   A0A015KY09   A0A267ESS5   A0A2H5U846   A0A267H554   A0A267H341  

KEGG

101738826    no KO assigned | (RefSeq) uncharacterized LOC101738826

GO

GO:0006310   GO:0000723   GO:0006281   GO:0005524   GO:0003678   GO:0004386   GO:0008234   GO:0006379   GO:0016020   GO:0051103   GO:0008270   GO:0042555   GO:0048384  

Length:

340

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.29289

Exp number, first 60 AAs:

0.00352

Total prob of N-in:

0.11537

outside

1  -  340

 

 

Pi

176.761771

Theta

147.079784

Tajima's D

3.743567

CLR

0

CSRT

0.997650117494125

Interpretation

Possibly Balancing Selection