SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03549
Pre Gene Modal
BGIBMGA006291
Annotation
eclosion_hormone_[synthetic_construct]
Full name
Eclosion hormone      
Alternative Name
EH
Ecdysis activator
Location in the cell
Extracellular   Reliability : 2.675
 

Sequence

CDS
ATGGCAAACAAACTGACCGCAGTCATCGTTGTTGCTCTCGCCGTGGCATTCATGGTCAACCTGGACTATGCCAACTGCAGCCCTGCCATCGCATCCAGCTACGACGCAATGGAAATTTGCATCGAGAACTGCGCGCAATGCAAAAAAATGTTCGGCCCTTGGTTCGAGGGATCCCTTTGCGCGGAGTCCTGCATCAAAGCCAGAGGCAAAGACATTCCGGAATGCGAAAGCTTCGCATCCATATCTCCATTCCTGAATAAGCTTTAA
Protein
MANKLTAVIVVALAVAFMVNLDYANCSPAIASSYDAMEICIENCAQCKKMFGPWFEGSLCAESCIKARGKDIPECESFASISPFLNKL

Summary

Description
Neuropeptide that triggers the performance of ecdysis behaviors at the end of a molt. It triggers adult behavior patterns: larval, pupal and adult ecdysis, and plasticization during the molt.
Similarity
Belongs to the insect eclosion hormone family.
Keywords
Complete proteome   Direct protein sequencing   Disulfide bond   Hormone   Neuropeptide   Reference proteome   Secreted   Signal  
Feature
chain  Eclosion hormone
EMBL
D10135    M27808    M26922    AY822476    AAV69026.1    NWSH01002602    + More
PCG67879.1    ODYU01012776    SOQ59250.1    DQ668369    ABG66962.1    KT005968    ALM30319.1    AK401977    BAM18599.1    KQ460324    KPJ15850.1    KQ459249    KPJ02414.1    AGBW02011024    OWR47359.1    KQ460078    KPJ17851.1    KQ458761    KPJ05178.1    KPJ05176.1    KPJ05177.1    CH477741    EAT36711.1    AJVK01007397    AXCN02001751    ATLV01018857    KE525251    KFB43406.1    APCN01005163    DS232329    EDS40133.1    ADMH02000723    ETN65246.1    AAAB01008849    EAU77164.1    GAMD01002673    JAA98917.1    KPJ17853.1    UFQS01000247    UFQT01000247    SSX01980.1    SSX22357.1    UFQS01002094    UFQT01002094    SSX13218.1    SSX32657.1    CH901007    EAT32321.1    JXUM01026757    KQ560766    KXJ80967.1    DS235873    EEB19572.1    JH432085    CP012526    ALC46290.1    KFB43407.1    GAPW01006555    JAC07043.1    GAPW01006662    JAC06936.1    CH477404    EAT41662.1    JXUM01020902    GAPW01006552    KQ560585    JAC07046.1    KXJ81787.1    CM000070    EAL27464.1    CH479179    EDW24067.1    CM000364    EDX12565.1    CH480827    EDW44730.1    AE014297    AGB96048.1    CM000160    EDW95786.1    X72302    X72303    BT023233    OUUW01000005    SPP80651.1    DS232168    EDS36532.1    CH954181    EDV48715.1    CH902617    EDV43680.2   
Pfam
PF04736   Eclosion
Interpro
IPR006825   Eclosion        + More
IPR000435   Tektin       

Ontologies

Topology

Subcellular location
Secreted  
SignalP
Position:   1 - 26,         Likelihood:  0.994430
 
 
Length:
88
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
18.3994
Exp number, first 60 AAs:
18.39939
Total prob of N-in:
0.62068
POSSIBLE N-term signal
sequence
outside
1  -  4
TMhelix
5  -  27
inside
28  -  88
 
 

Population Genetic Test Statistics

Pi
191.76287
Theta
184.785183
Tajima's D
-1.098651
CLR
1.874884
CSRT
0.123793810309485
Interpretation
Uncertain
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