Gene

KWMTBOMO03544

Annotation

PREDICTED:_uncharacterized_protein_LOC106118051?_partial_[Papilio_xuthus]

Location

Bomo_Chr6(-):11330778-11338144      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.815

CDS

ATGACGATGCAAGTCCACGCCATTCAACTTCAGGTATTAAGTAACAATCCCGGAGTTTTACCCGTCAGGGAAGGCACTGCTGTTTTGAGCAAAGACAAGTGGATAATAGCAAGAGTATTGGACTTTAAACCTATTAGAGAAGACTTAGATATTAATATTCAATGTTTCAGGGAACTAAATAGTTTAGTTAGTGTTAAGTTTATTAAGAACTTTACTTATAATTTTATAGATGTAAGAGAACAAGTAGAATATATGCAAAATCTAACAGTAAGCAAATTCGAACAAATCACTCCTACCTTTAAAATCAAACGCGGACTGATTAACCCAATTGGATCATTAATTAAAATCATTACAGGAAATCTGGATCACGATGATGCCATAAAATACGATAAATTAATTAGTGAAATAAAATCAGATCAAGACGCTAATGATAAAAAAATAACGTTAATCTCTGAAATGGTGCAAATTCTATCTAATTCAACCATTACCTTAAATAGAAACCTCATTCGATTGAATAGAGAAATTGCAACATTGTGGCAAAATTATACTGAAAATTTACGAATTGAACACTTTGAAGTTCAAATCATATCCGCATACAATAAAATATACCATAACCTTCAGACGATTCATGTTAAACTAAGTGAAATAGAAACTAGTTTTGCACTTAGTAGATTAGGAATATTACATCAATCCATTATTGATTCAAACAAATTATTAAGTTTACTTGAAAATATTCATAAGAAAGATAAATTAGTTTATACCCCTATTTTAGAAAATTTAGTTAAGATAGAGCAAACGATAACACTTAAGGCTTATTTTAAGAAGAGCCAAATTACCTACGTTTTGGAAATACCTTTGATCGAAAAGGAAAGCTATATCTATTATAAGCTAATACCATTGCCCGTATCTAAAAATCCCACAGTAATTATCCTTCCAAAATATCCCTACCTCTTAGCGAAAGGGTTGAAGATCAGACTGCTTGCCCAGCCATGCCAGGAAATCGACGAGGCCAGCTTCATCTGCATCAACGATGAGATGCTACAATTCATACAAGACCCCTGCATAACTGATCTAATGATGTACGTAGAAAACGTGAAATCATGCATTCAAATTCCAGTAATTATAGAAGACATCAAAATTCAGATTCTACAACAAAACCAATGGATTTTATACGCTGGAGATGAGACATTACTCACCAAAACCTGTCCTGAAGAAATATCCCGACAGAAAATCCAAGGCACCTATATACTCACCCTTGATGACCCCTGTGAAATTAAGATCCGAAATATAACTCTGAAAATGCGCCAAACCAATGTGGAAAATGTAGAATATACAAAATCACCGATGCTCAATTTACCCCTACTTGATTCAACGAGTAAAATAAAAACTGCAGAACCAGTGCACCTGGAAGACGTCGATCTTACAGACTTGAAGATCCTCTCATTCGCCCTGAAGAAAAGTGTTAGTGGTTGTGAAAACAGTGAAAAGGCAATTATCCGTGTGAAAAGTGTTAGCGTTTGGACTCTTTGCATCTATGTAATTTTAATAACTTTCATGTTATGTGCCTTAGTATATAAGTTCCGTATGAAATTTTGTAAGATTTCAGTACGTAGTTCTCCTGAAACAGAGAACTCCGTTCTTAAGGAGGGAGGAGTTACGTCGGGCACCTCTGCTGACGCATGTCTGCAAAGGCAGATCTTCGGCGAACTCAACTGCTGA

Protein

MTMQVHAIQLQVLSNNPGVLPVREGTAVLSKDKWIIARVLDFKPIREDLDINIQCFRELNSLVSVKFIKNFTYNFIDVREQVEYMQNLTVSKFEQITPTFKIKRGLINPIGSLIKIITGNLDHDDAIKYDKLISEIKSDQDANDKKITLISEMVQILSNSTITLNRNLIRLNREIATLWQNYTENLRIEHFEVQIISAYNKIYHNLQTIHVKLSEIETSFALSRLGILHQSIIDSNKLLSLLENIHKKDKLVYTPILENLVKIEQTITLKAYFKKSQITYVLEIPLIEKESYIYYKLIPLPVSKNPTVIILPKYPYLLAKGLKIRLLAQPCQEIDEASFICINDEMLQFIQDPCITDLMMYVENVKSCIQIPVIIEDIKIQILQQNQWILYAGDETLLTKTCPEEISRQKIQGTYILTLDDPCEIKIRNITLKMRQTNVENVEYTKSPMLNLPLLDSTSKIKTAEPVHLEDVDLTDLKILSFALKKSVSGCENSEKAIIRVKSVSVWTLCIYVILITFMLCALVYKFRMKFCKISVRSSPETENSVLKEGGVTSGTSADACLQRQIFGELNC

Uniprot

A0A1E1WG39   A0A1E1WEL8   A0A1E1WJ94   A0A1E1WHU0   A0A0A9YE18   A0A1W7R5Q3   + More
A0A146L7F0   A0A194QI19   A0A1W7R5R6   A0A0A9YH54   A0A1W7R5S8   A0A3Q0IUW7   A0A1Y1KA60   A0A1W4WKT8   A0A2A4JNX4   A0A0L7K4F8   A0A1W7R5V4   A0A2J7RGN4   A0A2J7PKF9   A0A2J7R072   O46113   A0A2J7RR07   A0A2J7RT21   A0A2P8Z700   A0A2J7PRT5   A0A2J7PVN3   A0A2J7Q497   A0A2J7PP10   A0A2H1W714   A0A2J7PYA9   A0A151IIG7   A0A151I9G7   A0A151IN78   A0A1W7R5L2   A0A151IB01   A0A0L7LML1   A0A2A4JSD5   A0A1I8M1E6   A0A2H8TDG9  

Pubmed

25401762    26823975    26354079    28004739    26227816    9405380    + More
29403074    25315136   

EMBL

GDQN01005090    JAT85964.1    GDQN01008189    GDQN01005659    JAT82865.1    JAT85395.1    + More
GDQN01003990    JAT87064.1    GDQN01004526    JAT86528.1    GBHO01013718    JAG29886.1    GEHC01001137    JAV46508.1    GDHC01015114    JAQ03515.1    KQ458761    KPJ05203.1    GEHC01001128    JAV46517.1    GBHO01011202    JAG32402.1    GEHC01001119    JAV46526.1    GEZM01087957    JAV58369.1    NWSH01000929    PCG73509.1    JTDY01011149    KOB57471.1    GEHC01001135    JAV46510.1    NEVH01003762    PNF39994.1    NEVH01024546    NEVH01013550    PNF16821.1    PNF28795.1    NEVH01008284    PNF34241.1    AJ000387    CAA04048.1    NEVH01000612    PNF43270.1    NEVH01000249    PNF43974.1    PYGN01000168    PSN52275.1    NEVH01021952    PNF19048.1    NEVH01020945    PNF20395.1    NEVH01018386    PNF23406.1    NEVH01023280    PNF18077.1    ODYU01006730    SOQ48837.1    NEVH01020850    PNF21316.1    KQ977542    KYN02067.1    KQ978283    KYM95688.1    KQ976963    KYN06785.1    GEHC01001178    JAV46467.1    KQ978157    KYM96677.1    JTDY01000529    KOB76793.1    NWSH01000770    PCG74312.1    GFXV01000329    MBW12134.1   

Proteomes

UP000053268    UP000079169    UP000192223    UP000218220    UP000037510    UP000235965    + More
UP000245037    UP000078542    UP000095301   

PRIDE

O46113   

Pfam

PF12259   Baculo_F        + More
PF07253   Gypsy
PF03564   DUF1759
PF05380   Peptidase_A17
PF05585   DUF1758
PF18701   DUF5641
PF17921   Integrase_H2C2

Interpro

IPR022048   Envelope_fusion-like        + More
IPR009882   Gypsy       
IPR017900   4Fe4S_Fe_S_CS       
IPR008737   Peptidase_asp_put       
IPR021109   Peptidase_aspartic_dom_sf       
IPR040676   DUF5641       
IPR008042   Retrotrans_Pao       
IPR005312   DUF1759       
IPR041588   Integrase_H2C2       

Gene 3D

2.40.70.10    

ProteinModelPortal

A0A1E1WG39   A0A1E1WEL8   A0A1E1WJ94   A0A1E1WHU0   A0A0A9YE18   A0A1W7R5Q3   + More
A0A146L7F0   A0A194QI19   A0A1W7R5R6   A0A0A9YH54   A0A1W7R5S8   A0A3Q0IUW7   A0A1Y1KA60   A0A1W4WKT8   A0A2A4JNX4   A0A0L7K4F8   A0A1W7R5V4   A0A2J7RGN4   A0A2J7PKF9   A0A2J7R072   O46113   A0A2J7RR07   A0A2J7RT21   A0A2P8Z700   A0A2J7PRT5   A0A2J7PVN3   A0A2J7Q497   A0A2J7PP10   A0A2H1W714   A0A2J7PYA9   A0A151IIG7   A0A151I9G7   A0A151IN78   A0A1W7R5L2   A0A151IB01   A0A0L7LML1   A0A2A4JSD5   A0A1I8M1E6   A0A2H8TDG9  

KEGG

NA   

GO

GO:0016021  

Length:

572

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.45186

Exp number, first 60 AAs:

0.00044

Total prob of N-in:

0.00457

outside

1  -  502

TMhelix

503  -  525

inside

526  -  572

 

 

Pi

278.007797

Theta

204.075217

Tajima's D

2.912419

CLR

37.920288

CSRT

0.972201389930503

Interpretation

Uncertain