Silkworm Genome Informatics Database

Gene

KWMTBOMO03543

Annotation

PREDICTED:_uncharacterized_protein_LOC101742341_[Bombyx_mori]

Location

Bomo_Chr6(+):11317025-11321891 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.371 PlasmaMembrane Reliability : 1.477

CDS

ATGCTAGGAATACGTTCGAGCCAGATCACGTGGCTACATGGATTAGTGAATTCGGCTCGTCAAACTTTAAGGATCCACGGGTTGAATGTGACAGCGCAAAACCGCGGAACCATCGGCACGTTCGTTCAGTTGCTCACGTGGAATGACGTCATAATCGGTTCTGCTTCTACAGACTCAGCGCCATTCTATTACAACGTCGTATTTCCTGATTCGTGCACAGAAACGAACTCCACTGCTAAGCCATGTGAATACTTTGACGTTACAATGGAAACGGAAATGGTTGTTCGACTGCCGGTCACCGACATCATCTTTAATTTCAGCTCCACTGAAGCAAATCTAAATGTTTCCGTGGAAAATATTGAATTATGTTTTGAATAA

Protein

MLGIRSSQITWLHGLVNSARQTLRIHGLNVTAQNRGTIGTFVQLLTWNDVIIGSASTDSAPFYYNVVFPDSCTETNSTAKPCEYFDVTMETEMVVRLPVTDIIFNFSSTEANLNVSVENIELCFE

Uniprot

A0A2W1BV88 A0A2A4J0L3 A0A2H1WDB2 A0A194QRP3 A0A194QG41

Pubmed

28756777 26354079

EMBL

KZ149987 PZC75673.1 NWSH01004570 PCG64913.1 ODYU01007789 SOQ50852.1 + More
KQ461181 KPJ07650.1 KQ459249 KPJ02416.1

Proteomes

UP000218220 UP000053240 UP000053268

Pfam

PF01410   COLFI        + More
PF01391   Collagen
PF00431   CUB

Interpro

IPR000885   Fib_collagen_C        + More
IPR008160   Collagen
IPR000859   CUB_dom
IPR035914   Sperma_CUB_dom_sf

SUPFAM

SSF49854 SSF49854

Gene 3D

2.60.120.290

CDD

cd00041 CUB

ProteinModelPortal

A0A2W1BV88 A0A2A4J0L3 A0A2H1WDB2 A0A194QRP3 A0A194QG41

KEGG

101742341 no KO assigned | (RefSeq) uncharacterized LOC101742341

GO

GO:0005201 GO:0005581

Length:

125

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02913

Exp number, first 60 AAs:

0.0253

Total prob of N-in:

0.17093

outside

1 - 125

Pi

165.512442

Theta

51.144358

Tajima's D

5.19961

CLR

0

CSRT

0.999950002499875

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree