Silkworm Genome Informatics Database

Gene

KWMTBOMO03542

Annotation

PREDICTED:_uncharacterized_protein_LOC101742341_[Bombyx_mori]

Location

Bomo_Chr6(-):11300551-11305064 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 2.252

CDS

ATGTATGGATTACGTTCAACCCAGATCATGTGGCTACATCGATTAGCTAATTCAGCAAGTCAAGTGATAAGGATCCGCGGTTTGGATATCAAAGCTTCGAGCCCAGAGCTAATCCAGTCAATCGTTCAATTACTGACATGGAATGATGTTGCAATTGGTTTTTATCCTACTTCAAAATCGCTATTCCATTACGGTGTGGAACTGCCTACATCGTGCACGGAGAAAAACTCCACTACTGAGCCGTGTGAATACGTAGATATCATAATGAAGACGGACATGGTCGGAAGGCTTCCGATAACTGATATATACTTTAAAGTTAATTTAATGGAAAAGGATTTGAAAATTTCCGTAGAAAACATCAGATTATGCTTTAATTAA

Protein

MYGLRSTQIMWLHRLANSASQVIRIRGLDIKASSPELIQSIVQLLTWNDVAIGFYPTSKSLFHYGVELPTSCTEKNSTTEPCEYVDIIMKTDMVGRLPITDIYFKVNLMEKDLKISVENIRLCFN

Uniprot

A0A2W1BV88 A0A2H1WDB2 A0A2A4J0L3 A0A194QRP3 A0A194QG41

Pubmed

28756777 26354079

EMBL

KZ149987 PZC75673.1 ODYU01007789 SOQ50852.1 NWSH01004570 PCG64913.1 + More
KQ461181 KPJ07650.1 KQ459249 KPJ02416.1

Proteomes

UP000218220 UP000053240 UP000053268

Pfam

PF01410   COLFI        + More
PF01391   Collagen
PF00431   CUB

Interpro

IPR000885   Fib_collagen_C        + More
IPR008160   Collagen
IPR000859   CUB_dom
IPR035914   Sperma_CUB_dom_sf

SUPFAM

SSF49854 SSF49854

Gene 3D

2.60.120.290

CDD

cd00041 CUB

ProteinModelPortal

A0A2W1BV88 A0A2H1WDB2 A0A2A4J0L3 A0A194QRP3 A0A194QG41

KEGG

101740090 no KO assigned | (RefSeq) uncharacterized LOC101740090

GO

GO:0005201 GO:0005581

Length:

125

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00956999999999999

Exp number, first 60 AAs:

0.00892

Total prob of N-in:

0.25781

outside

1 - 125

Pi

198.352211

Theta

175.01382

Tajima's D

-0.767536

CLR

0.502683

CSRT

0.185440727963602

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree