SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03534  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA014236
Annotation
PREDICTED:_uncharacterized_protein_LOC105841512_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.341 Nuclear   Reliability : 1.902
 

Sequence

CDS
ATGCCGAATTCCGAGGAGCGCGACGCGAGAGCCGCGTCGCCGCCCCACGCGCCGTCGAGTGACGCGCCGCCCGCCAGTGTTTGCTTCCGCCCGGAAGACATCACCATGCTGATCGACACCCTTCAACGAACGCAGCTAGACGCGTTCCGGGAGCTGTTAGATAGCGTCAGGCAGTCGGCGACTCCTACATTCGACCATCGGCCCGCCAACAACTTCAGCCGCTGCAAATCTGTATTCAGCGGACGCGCAGACGAGTCAGTAGAAGGTTTTATCGACGCAATAGAATCGTACAGAGACGCCGCCAATGTTCCCGATGACGTAGCCGTAAAAGGTATTTCCATGTTGCTGACGCACACCGCCGCTACCTGGTGGCAGGGTATCAAGCATCAAGTTTCTACATGGGAAGACGTCATCTCAAATCTACGAAGTGCTTTTGGTGATCGCCGCCCACCCCACAGAATTTATGTCGACCTATTCGCAGACGGCCAGCAGCCTATGGAGAAAACCGACCTGTTTGTCGCCAGGGCTCGAGCACTCCTCGCGAAGCTACCTCGAGGCGACCTATGTGAAAAAGTGGAGCTCGATATGATATACGGATTACTGCATCATAAAATTCGTAAACGCCTTCGTAGAGAGGAAATCACCAGTTTCAATGTTCTCCTGCAAAAAGCACGAAGTATTGAGGATTCTACGAAAGAAGCGCATACTTCAAATGCCGTCGCCGAGACCTCAAAGGGTGCCGCCGCCGCCGCCCGCGCTCGACTCGAGCCGCCGCGTCCTGCAACGCAGCGTGTACCTACGGCCGCTGTAGAAGTTTCCCCGCGCCAACGTTCGTCAGGCGATAACGCCGACGCCACTCCGACCGCCGAAAAACCCGAGAAACGTATAGAGATTTTAGGAATCCGAGGTAGGGCTTTAATCGACACCGCAGCCAAGCGAACTGTTGCCGGTTCTTCACTCTACGCCCTATTGCAACAGCATAATCAACCTTTTGTGCGTAATTCTATGCGTGTTAAGCTCGCCGATGGTTCAATGCTAACACGACAAATGCTGACAACGACACTTGACGTGAAGTTATTACCGTATAAGATAATTCCCATAGAATTCGTCGTATTCCCGGACGCCCAGGATAATGACACATTATTGGGTGTAGACTTTTTAGTAGCAGCTGGTTTAGCCATCGACTTCCATACTTCGACATGGCGCTATCATGGTTCTGAACGAGTTTTTCCATTGGAGTTCGAGTACCCCAGTGACCTCACGCCTTGTTCTGCTGCTGATTTCTTAAGAGAAGACGAGGGAACTATGCTGTGTCCTCCAGAGCGTTAA
Protein
MPNSEERDARAASPPHAPSSDAPPASVCFRPEDITMLIDTLQRTQLDAFRELLDSVRQSATPTFDHRPANNFSRCKSVFSGRADESVEGFIDAIESYRDAANVPDDVAVKGISMLLTHTAATWWQGIKHQVSTWEDVISNLRSAFGDRRPPHRIYVDLFADGQQPMEKTDLFVARARALLAKLPRGDLCEKVELDMIYGLLHHKIRKRLRREEITSFNVLLQKARSIEDSTKEAHTSNAVAETSKGAAAAARARLEPPRPATQRVPTAAVEVSPRQRSSGDNADATPTAEKPEKRIEILGIRGRALIDTAAKRTVAGSSLYALLQQHNQPFVRNSMRVKLADGSMLTRQMLTTTLDVKLLPYKIIPIEFVVFPDAQDNDTLLGVDFLVAAGLAIDFHTSTWRYHGSERVFPLEFEYPSDLTPCSAADFLREDEGTMLCPPER

Summary

Similarity
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
Pfam
PF00063   Myosin_head        + More
PF06017   Myosin_TH1
PF00077   RVP
PF03732   Retrotrans_gag
Interpro
IPR010926   Myosin_TH1        + More
IPR036961   Kinesin_motor_dom_sf       
IPR001609   Myosin_head_motor_dom       
IPR027417   P-loop_NTPase       
IPR021109   Peptidase_aspartic_dom_sf       
IPR000048   IQ_motif_EF-hand-BS       
IPR001969   Aspartic_peptidase_AS       
IPR018061   Retropepsins       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR005162   Retrotrans_gag_dom       
SUPFAM
SSF52540   SSF52540        + More
SSF50630   SSF50630       
SSF57756   SSF57756       
Gene 3D

Ontologies

Topology

Length:
442
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02452
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01045
outside
1  -  442
 
 

Population Genetic Test Statistics

Pi
266.123319
Theta
148.052606
Tajima's D
3.120437
CLR
0
CSRT
0.984100794960252
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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