Gene

KWMTBOMO03525

Annotation

PREDICTED:_myosin_regulatory_light_chain?_smooth_muscle_[Bombyx_mori]

Location

Bomo_Chr6(-):10646466-10653494      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.601 Nuclear   Reliability : 1.052

CDS

ATGCAGGCACCAAGCCCCTTGGACTTCGATGGTTTTGTTAATCTACTTGGATACAAAACTTTAGAACTCGATTCCGAAGAGACGCTTGTAGCTGCTTTGTCACGGTGGGATCCAAATAATACAGGACTCATTTCAGAAGAAAGAATCCGACACGATCTCATGACCTGGGGCGATCGCTTCACCGCAAAGGAAGCAGACTACGCTTTAGACGAGGCACCGATAGTCCAAAAAGAAGACGGCACCATGATAGATTATATACGGTTTTGTAGTCAGTTGAGTGGCCTTCGCAAGCCAAATAAGCCGAGAGATCAATAA

Protein

MQAPSPLDFDGFVNLLGYKTLELDSEETLVAALSRWDPNNTGLISEERIRHDLMTWGDRFTAKEADYALDEAPIVQKEDGTMIDYIRFCSQLSGLRKPNKPRDQ

Uniprot

A0A2H1VVU1   A0A194QG52   A0A212FJC4   A0A194QQL3   A0A0L7LEQ8   A0A067QZ09   + More
A0A2J7PYT8   A0A1B6MHB3   A0A1B6I3T8   A0A1B6G4S6   A0A1B6HVF3   A0A1B0CQY7   A0A1L8E4X6   A0A1B0DP88   A0A232EUR9   K7JJP0   A0A0A1XCM6   A0A0K8WKD5   A0A034V9T9   A0A0Q9X967   Q29B37   B4GZ50   A0A1W4UBD2   B4JRF2   W8C574   Q86B93   A0A1A9W7A9   A0A1I8NYM5   B3P1C1   B4PNS3   B4HGZ5   Q9VG88   Q8IGI9   B4LXH1   T1PI81   A0A1A9VFX7   B4NBE3   A0A1B0FEG3   B3M2P5   A0A3B0JJH2   A0A0L0C0R3   A7USY2   A0A3P7EEQ6   A0A0R3WQ68   A0A087VX66   W6USV8   A0A068X1P7   A0A023EI44   Q16XC2   A0A023EGU9   A0A1J1I901   Q16XC3   A0A154NYW8   A0A182I7S8   A0A0R3W7B2   A0A158QGB9   A0A182QP97   A0A1Q3G4I4   A0A1Q3G432   A0A0P6F2Y6   A0A0P6EDW4   A0A0P5SM87   A0A0P5RUG6   E9H630   A0A164T4S8   A0A087ZUQ1   E0VZV8   A0A088AU38   A0A0P6F700   A0A0P5GKH4   A0A0M9A6V5   A0A0P5DUN5   A0A0L7QSJ3   A0A2A3EFZ7   A0A0P5P2H5   A0A0P5K5G7   A0A0R3T2B8   A0A2P8YJZ1   A0A0N8BQP6   A0A0P5EB41   A0A0P6AUH3   A0A182JTU6   A0A182RKB6   A0A0N8AE49   A0A0P5NRQ2   A0A084VQE2   A0A182PL39   A0A182TWD2   A0A182LAB6   F5HIZ5   A0A182IDJ3   A0A0P4Z7L6   A0A182J7J9   A0A182X3C7   A0A0P6EMY9  

Pubmed

26354079    22118469    26227816    24845553    28648823    20075255    + More
25830018    25348373    17994087    15632085    24495485    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    26109357    26109356    25315136    26108605    12364791    14747013    17210077    23485966    24013640    24945155    17510324    26483478    21292972    20566863    29403074    24438588    20966253   

EMBL

ODYU01004585    SOQ44612.1    KQ459249    KPJ02426.1    AGBW02008284    OWR53831.1    + More
KQ461181    KPJ07639.1    JTDY01001522    KOB73661.1    KK853179    KDR10218.1    NEVH01020342    PNF21486.1    GEBQ01004637    JAT35340.1    GECU01026105    JAS81601.1    GECZ01012347    JAS57422.1    GECU01029080    JAS78626.1    AJWK01024226    GFDF01000301    JAV13783.1    AJVK01018093    NNAY01002091    OXU22100.1    GBXI01014388    GBXI01005596    JAC99903.1    JAD08696.1    GDHF01000703    JAI51611.1    GAKP01020412    GAKP01020408    JAC38540.1    CH933806    KRG01137.1    CM000070    EAL27162.2    CH479198    EDW28068.1    CH916373    EDV94342.1    GAMC01009166    JAB97389.1    AE014297    AAO41562.1    CH954181    EDV49380.1    CM000160    EDW97088.1    KRK03527.1    KRK03528.1    KRK03529.1    CH480815    CH481222    EDW42466.1    EDW52770.1    BT058059    AAF54797.2    ACM78501.1    BT001764    AAN71519.1    CH940650    EDW67849.1    KA647623    AFP62252.1    CH964232    EDW81107.1    CCAG010001985    CH902617    EDV42366.1    OUUW01000005    SPP80482.1    JRES01001160    KNC25049.1    AAAB01008880    EDO64176.2    UYWX01001647    VDM21450.1    LN902846    CDI96713.1    APAU02000002    EUB64720.1    LK028595    CDS23898.1    GAPW01005032    JAC08566.1    CH477543    EAT39251.1    EAT39252.1    JXUM01022978    JXUM01022979    JXUM01022980    JXUM01022981    JXUM01079721    JXUM01079722    JXUM01079723    JXUM01079724    GAPW01005034    GAPW01005033    GAPW01005031    GAPW01005030    JAC08568.1    CVRI01000040    CRK94905.1    EAT39249.1    EAT39250.1    KQ434783    KZC04762.1    APCN01002552    UYRS01018475    VDK36211.1    UYSG01011654    VDL63221.1    AXCN02001156    GFDL01000366    JAV34679.1    GFDL01000473    JAV34572.1    GDIQ01062326    JAN32411.1    GDIQ01065376    JAN29361.1    GDIP01138013    JAL65701.1    GDIQ01096512    JAL55214.1    GL732595    EFX72831.1    LRGB01001872    KZS10197.1    DS235854    EEB18914.1    GDIQ01060378    JAN34359.1    GDIQ01241114    JAK10611.1    KQ435724    KOX78437.1    GDIP01157349    JAJ66053.1    KQ414758    KOC61519.1    KZ288255    PBC30675.1    GDIQ01141004    JAL10722.1    GDIQ01194529    JAK57196.1    UZAE01000376    VDN96928.1    PYGN01000541    PSN44563.1    GDIQ01154291    JAK97434.1    GDIP01144612    JAJ78790.1    GDIP01026253    JAM77462.1    GDIP01156345    JAJ67057.1    GDIQ01142752    JAL08974.1    ATLV01015192    KE525003    KFB40186.1    AAAB01008811    EGK96256.1    APCN01004704    GDIP01219402    JAJ04000.1    AXCP01007140    GDIQ01060376    JAN34361.1   

Proteomes

UP000053268    UP000007151    UP000053240    UP000037510    UP000027135    UP000235965    + More
UP000092461    UP000092462    UP000215335    UP000002358    UP000009192    UP000001819    UP000008744    UP000192221    UP000001070    UP000000803    UP000091820    UP000095300    UP000008711    UP000002282    UP000001292    UP000008792    UP000095301    UP000078200    UP000007798    UP000092444    UP000007801    UP000268350    UP000037069    UP000007062    UP000274429    UP000046396    UP000017246    UP000019149    UP000008820    UP000069940    UP000183832    UP000076502    UP000075840    UP000046400    UP000282613    UP000046397    UP000274504    UP000075886    UP000000305    UP000076858    UP000005203    UP000009046    UP000053105    UP000053825    UP000242457    UP000046398    UP000278807    UP000245037    UP000075881    UP000075900    UP000030765    UP000075885    UP000075902    UP000075882    UP000075880    UP000076407   

PRIDE

Q86B93    Q9VG88    Q8IGI9   

Pfam

PF07553   Lipoprotein_Ltp        + More
PF00036   EF-hand_1
PF13405   EF-hand_6
PF13499   EF-hand_7
PF00431   CUB
PF13833   EF-hand_8

Interpro

IPR011434   DUF1535        + More
IPR002048   EF_hand_dom       
IPR011992   EF-hand-dom_pair       
IPR018247   EF_Hand_1_Ca_BS       
IPR035914   Sperma_CUB_dom_sf       
IPR000859   CUB_dom       

SUPFAM

SSF47473   SSF47473        + More
SSF49854   SSF49854       

Gene 3D

2.60.120.290    

CDD

cd00051  EFh
cd00041  CUB

ProteinModelPortal

A0A2H1VVU1   A0A194QG52   A0A212FJC4   A0A194QQL3   A0A0L7LEQ8   A0A067QZ09   + More
A0A2J7PYT8   A0A1B6MHB3   A0A1B6I3T8   A0A1B6G4S6   A0A1B6HVF3   A0A1B0CQY7   A0A1L8E4X6   A0A1B0DP88   A0A232EUR9   K7JJP0   A0A0A1XCM6   A0A0K8WKD5   A0A034V9T9   A0A0Q9X967   Q29B37   B4GZ50   A0A1W4UBD2   B4JRF2   W8C574   Q86B93   A0A1A9W7A9   A0A1I8NYM5   B3P1C1   B4PNS3   B4HGZ5   Q9VG88   Q8IGI9   B4LXH1   T1PI81   A0A1A9VFX7   B4NBE3   A0A1B0FEG3   B3M2P5   A0A3B0JJH2   A0A0L0C0R3   A7USY2   A0A3P7EEQ6   A0A0R3WQ68   A0A087VX66   W6USV8   A0A068X1P7   A0A023EI44   Q16XC2   A0A023EGU9   A0A1J1I901   Q16XC3   A0A154NYW8   A0A182I7S8   A0A0R3W7B2   A0A158QGB9   A0A182QP97   A0A1Q3G4I4   A0A1Q3G432   A0A0P6F2Y6   A0A0P6EDW4   A0A0P5SM87   A0A0P5RUG6   E9H630   A0A164T4S8   A0A087ZUQ1   E0VZV8   A0A088AU38   A0A0P6F700   A0A0P5GKH4   A0A0M9A6V5   A0A0P5DUN5   A0A0L7QSJ3   A0A2A3EFZ7   A0A0P5P2H5   A0A0P5K5G7   A0A0R3T2B8   A0A2P8YJZ1   A0A0N8BQP6   A0A0P5EB41   A0A0P6AUH3   A0A182JTU6   A0A182RKB6   A0A0N8AE49   A0A0P5NRQ2   A0A084VQE2   A0A182PL39   A0A182TWD2   A0A182LAB6   F5HIZ5   A0A182IDJ3   A0A0P4Z7L6   A0A182J7J9   A0A182X3C7   A0A0P6EMY9  

PDB

3J04     E-value=7.53072e-09,     Score=137

KEGG

101741062    K12757 myosin regulatory light chain 12 | (RefSeq) myosin regulatory light chain, smooth muscle

GO

GO:0005509  

Length:

104

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.06511

outside

1  -  104

 

 

Pi

235.036068

Theta

180.452487

Tajima's D

1.233912

CLR

0.046002

CSRT

0.722913854307285

Interpretation

Uncertain