Gene

KWMTBOMO03519

Pre Gene Modal

BGIBMGA006241

Annotation

PREDICTED:_solute_carrier_family_25_member_40-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr6(-):10384767-10390054      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.427

CDS

ATGATCCGGGAAGACGATCCTCAATTTCGGATTACTCCACTTCAACAAATGGCATCGGCATGTTCCGGCGCTCTTATAACCTCTTTGTTCATGACACCATTAGATGTTGTAAAAATAAGACTACAGGCGCAACAGAAGGCTTTACTATCAAATAAGTGCTATCTTTATTGCAATGGCTTAATGGAGCATTTATGTCCTTGTGGTGAAACTGCTTGGGTACCGAAAAGAGTCCATTTCCATGGGACTTTTGATGCTTTCTACAAAATAGCTAAATTAGAAGGAGTACCAGCGTTATGGTCTGGCTTAAGTCCCACTTTGGTATTAGCAGTTCCATGCACTATGATCTACTTTGTATCATATGAACAATTAAGATATAGAATGAAGACAATGCACAATAAAATGACTGGAGAGTTTGGTCAACCTATGTGGATTCCATTAATAGCAGGAGCAACAGCAAGGATCACTGCGGTCACATTAGTCAGTCCTTTAGAACTAATTAGAACAAAAATGCAATCAAAACACTTGACATATTCAGAAATTACGTCGGCATTACGGCAAGTCATAAAATATGAAGGCTATGGAGGACTTTTCCGAGGCTTAGGATCAACACTGTTAAGGGATGTCCCATTCTCAGGAATATACTGGACTACTTTCGAATCGACGAAGAGAGCGTTCAATAAACCGGATTCAGAAAAAAATTCGTTCCTTTTTAATTTTTTCTGTGGTTCGGTAGCTGGCAGTATCGCGGCCTTTGTAACCCTTCCTTTTGACGTAGTAAAAACACATCAACAAATAGAATTAGGGGAGAAAGAGATATATACAGATGGTAAAATCCAACAGAGAGCTTCGAATATGACAGACATTGTCAGAAACATATACAAGAATCACGGTCTGAAAGGTTTGTTTACCGGTCTCATGCCTCGAATATTTAAAGTGGCGCCCGCTTGTGCAATCATGATCTCAACGTTCGAATACGGCAAGCAGTTCTTCCAGAAATACAATTCGCAAAAATATAAGGAGAAATTGCAAAGGCACCAAGATATTGTTATAATGAGTCAATCAACAACCAGCAGTGGATACTCATGA

Protein

MIREDDPQFRITPLQQMASACSGALITSLFMTPLDVVKIRLQAQQKALLSNKCYLYCNGLMEHLCPCGETAWVPKRVHFHGTFDAFYKIAKLEGVPALWSGLSPTLVLAVPCTMIYFVSYEQLRYRMKTMHNKMTGEFGQPMWIPLIAGATARITAVTLVSPLELIRTKMQSKHLTYSEITSALRQVIKYEGYGGLFRGLGSTLLRDVPFSGIYWTTFESTKRAFNKPDSEKNSFLFNFFCGSVAGSIAAFVTLPFDVVKTHQQIELGEKEIYTDGKIQQRASNMTDIVRNIYKNHGLKGLFTGLMPRIFKVAPACAIMISTFEYGKQFFQKYNSQKYKEKLQRHQDIVIMSQSTTSSGYS

Similarity

Belongs to the mitochondrial carrier (TC 2.A.29) family.

Uniprot

A0A212F929   A0A194QRM9   A0A194QG57   A0A2W1BUG0   A0A2A4JJP0   A0A2A4JJQ2   + More
A0A2A4JII8   A0A2A4JI34   E2BN82   A0A195EVW7   A0A158NAN4   A0A151I5U7   A0A195DQT4   A0A151WSV3   A0A310SG36   A0A026WLG2   A0A3L8D973   E2AC99   K7J2X8   A0A232FF56   A0A0V0G6Q5   A0A182SMB5   Q17LJ4   A0A087ZNZ6   A0A067RFW3   A0A023EQZ6   A0A023F8C0   A0A1Q3FGJ2   A0A182RF33   A0A182MLZ8   A0A182IWK2   A0A2A3EPU7   A0A182YBE9   A0A182K9M8   A0A0P4VJ11   A0A084VXT9   A0A1Q3FG65   R4FN22   A0A182FRL6   A0A2M4ARB1   A0A182VVU1   B0X0Z5   A0A182QTG4   W5J3R8   A0A182PRP0   Q7PX99   A0A182HKI2   A0A182X9J9   A0A182V6V4   A0A182TR96   A0A182NQL0   A0A336L8L7   D6W8J0   A0A0L0BRM9   A0A224XS71   A0A139WM29   Q29IV2   A0A3B0KVG1   A0A069DSR9   A0A0L7RAS4   B4HAP8   A0A336LCU3   A0A0M4EUR7   E0VD13   T1PAB4   B4MAS8   U4UM12   A0A1A9WCJ0   A0A1A9VRD4   B3MQA6   D3TQH5   W8C757   A0A1B0A074   A0A1W4VVE7   A0A1B6IS83   A0A1A9XDV2   B4NBT1   A0A0A1WVJ3   A0A1W4WVB7   A0A0R3P450   A0A034WBB4   A0A0K8VVD7   A0A1W4WJ88   B4PZF9   J9K4U3   A0A2S2Q9D6   Q9VWG0   E9IU06   U5ESD3   A0A0N0U4S5   B3NVQ4   T1J4G9   A0A1B0B8H0   A0A0T6B8J9   A0A0Q9WDD8   A0A154PAA9   B4JME9  

Pubmed

22118469    26354079    28756777    20798317    21347285    24508170    + More
30249741    20075255    28648823    17510324    24845553    24945155    25474469    25244985    27129103    24438588    20920257    23761445    12364791    14747013    17210077    18362917    19820115    26108605    15632085    17994087    26334808    20566863    25315136    23537049    20353571    24495485    25830018    25348373    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    21282665   

EMBL

AGBW02009653    OWR50227.1    KQ461181    KPJ07635.1    KQ459249    KPJ02431.1    + More
KZ149899    PZC78629.1    NWSH01001337    PCG71620.1    PCG71622.1    PCG71619.1    PCG71621.1    GL449385    EFN82844.1    KQ981954    KYN32286.1    ADTU01010398    KQ976413    KYM90347.1    KQ980612    KYN15172.1    KQ982767    KYQ50960.1    KQ771982    OAD52510.1    KK107182    EZA55939.1    QOIP01000011    RLU16682.1    GL438484    EFN68945.1    NNAY01000356    OXU28947.1    GECL01002330    JAP03794.1    CH477215    EAT47542.1    KK852713    KDR17925.1    GAPW01002050    JAC11548.1    GBBI01001131    JAC17581.1    GFDL01008372    JAV26673.1    AXCM01000473    KZ288204    PBC33256.1    GDKW01001681    JAI54914.1    ATLV01018207    KE525224    KFB42783.1    GFDL01008497    JAV26548.1    ACPB03019018    GAHY01001494    JAA76016.1    GGFK01009988    MBW43309.1    DS232249    EDS38387.1    AXCN02001517    ADMH02002105    ETN59017.1    AAAB01008987    EAA01201.3    APCN01000830    UFQS01001311    UFQT01001311    SSX10258.1    SSX29946.1    KQ971312    EEZ98298.2    JRES01001467    KNC22648.1    GFTR01005443    JAW10983.1    KYB29088.1    CH379063    EAL32551.2    OUUW01000020    SPP89341.1    GBGD01001909    JAC86980.1    KQ414618    KOC67925.1    CH479242    EDW37659.1    UFQS01003405    UFQT01003405    SSX15608.1    SSX34970.1    CP012528    ALC49551.1    DS235070    EEB11269.1    KA645085    AFP59714.1    CH940655    EDW66337.2    KB632277    ERL91211.1    CH902621    EDV44532.1    CCAG010008636    EZ423677    ADD19953.1    GAMC01008171    JAB98384.1    GECU01017915    JAS89791.1    CH964239    EDW82290.1    GBXI01011198    JAD03094.1    KRT06115.1    GAKP01007522    JAC51430.1    GDHF01009480    JAI42834.1    CM000162    EDX02115.1    KRK06565.1    ABLF02010292    GGMS01005131    MBY74334.1    AE014298    AY070516    BT125676    AAF48981.2    AAF48982.2    AAL47987.1    AAN09511.1    ADN93321.1    AHN59918.1    GL765822    EFZ15947.1    GANO01002408    JAB57463.1    KQ435798    KOX73328.1    CH954180    EDV46719.1    JH431845    JXJN01009934    LJIG01009148    KRT83660.1    KRF82637.1    KQ434857    KZC08835.1    CH916371    EDV92474.1   

Proteomes

UP000007151    UP000053240    UP000053268    UP000218220    UP000008237    UP000078541    + More
UP000005205    UP000078540    UP000078492    UP000075809    UP000053097    UP000279307    UP000000311    UP000002358    UP000215335    UP000075901    UP000008820    UP000005203    UP000027135    UP000075900    UP000075883    UP000075880    UP000242457    UP000076408    UP000075881    UP000030765    UP000015103    UP000069272    UP000075920    UP000002320    UP000075886    UP000000673    UP000075885    UP000007062    UP000075840    UP000076407    UP000075903    UP000075902    UP000075884    UP000007266    UP000037069    UP000001819    UP000268350    UP000053825    UP000008744    UP000092553    UP000009046    UP000095301    UP000008792    UP000030742    UP000091820    UP000078200    UP000007801    UP000092444    UP000092445    UP000192221    UP000092443    UP000007798    UP000192223    UP000002282    UP000007819    UP000000803    UP000053105    UP000008711    UP000092460    UP000076502    UP000001070   

PRIDE

Q9VWG0   

Pfam

PF00153   Mito_carr        + More
PF04727   ELMO_CED12

Interpro

IPR023395   Mt_carrier_dom_sf        + More
IPR018108   Mitochondrial_sb/sol_carrier       
IPR002067   Mit_carrier       
IPR006816   ELMO_dom       

SUPFAM

SSF103506   SSF103506       

Gene 3D

1.50.40.10    

ProteinModelPortal

A0A212F929   A0A194QRM9   A0A194QG57   A0A2W1BUG0   A0A2A4JJP0   A0A2A4JJQ2   + More
A0A2A4JII8   A0A2A4JI34   E2BN82   A0A195EVW7   A0A158NAN4   A0A151I5U7   A0A195DQT4   A0A151WSV3   A0A310SG36   A0A026WLG2   A0A3L8D973   E2AC99   K7J2X8   A0A232FF56   A0A0V0G6Q5   A0A182SMB5   Q17LJ4   A0A087ZNZ6   A0A067RFW3   A0A023EQZ6   A0A023F8C0   A0A1Q3FGJ2   A0A182RF33   A0A182MLZ8   A0A182IWK2   A0A2A3EPU7   A0A182YBE9   A0A182K9M8   A0A0P4VJ11   A0A084VXT9   A0A1Q3FG65   R4FN22   A0A182FRL6   A0A2M4ARB1   A0A182VVU1   B0X0Z5   A0A182QTG4   W5J3R8   A0A182PRP0   Q7PX99   A0A182HKI2   A0A182X9J9   A0A182V6V4   A0A182TR96   A0A182NQL0   A0A336L8L7   D6W8J0   A0A0L0BRM9   A0A224XS71   A0A139WM29   Q29IV2   A0A3B0KVG1   A0A069DSR9   A0A0L7RAS4   B4HAP8   A0A336LCU3   A0A0M4EUR7   E0VD13   T1PAB4   B4MAS8   U4UM12   A0A1A9WCJ0   A0A1A9VRD4   B3MQA6   D3TQH5   W8C757   A0A1B0A074   A0A1W4VVE7   A0A1B6IS83   A0A1A9XDV2   B4NBT1   A0A0A1WVJ3   A0A1W4WVB7   A0A0R3P450   A0A034WBB4   A0A0K8VVD7   A0A1W4WJ88   B4PZF9   J9K4U3   A0A2S2Q9D6   Q9VWG0   E9IU06   U5ESD3   A0A0N0U4S5   B3NVQ4   T1J4G9   A0A1B0B8H0   A0A0T6B8J9   A0A0Q9WDD8   A0A154PAA9   B4JME9  

PDB

6GCI     E-value=8.15604e-13,     Score=178

KEGG

101740778    K15119 solute carrier family 25, member 39/40 | (RefSeq) solute carrier family 25 member 40-like

GO

GO:0016021   GO:0022857   GO:0055065   GO:0005739   GO:1990542  

Length:

361

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

81.36061

Exp number, first 60 AAs:

5.86945

Total prob of N-in:

0.58944

outside

1  -  97

TMhelix

98  -  120

inside

121  -  233

TMhelix

234  -  256

outside

257  -  361

 

 

Pi

226.050069

Theta

172.910455

Tajima's D

1.190602

CLR

0.459591

CSRT

0.713464326783661

Interpretation

Possibly Positive selection