SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03512
Annotation
PREDICTED:_uncharacterized_protein_LOC101740362_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 2.03 Nuclear   Reliability : 1.374
 

Sequence

CDS
ATGACGTTTAAGTATCAACAGTTCACTCAACGTAAAGCTTTGATAAGTAATTTTGTGTTTCCAGTATCCATCTGCCTACGGGTTGTAGGGATTTCTGTGCCGCCGCTGAAGCAGCGTGGTGATTCTGCGACCCTAACCTGCGAATACGATTTGGAGGGCGGGAAACTATACTCAGTGAAATGGTATCGAGATAATGAAGAGTTCTACCGATACATGCCGAGGCTTAGACCGCCGCAACACGCACATCAATTGGATGGCGTCAAAGTTGATCTTGAAAAGTCAACAGCTCGTCGAGTCCATCTCAGAGAATTGACTTTGAAGTCCCGAGGGCTGTACCGATGTGAGGTATCAGAGGAAGCACCGTCATTCCACTCGGCACAGGCAGAGAATTTTATGGAAATTTATTATTTTCCGAAGGAGAGTCCTCGGATCACGGGACTCGAAGGACCATATAACATCAAGGATATGCTAGACGTTAACTGTTCATCAGCTCGATCGTTCCCAGCTCCGGAATTGCAATGGCTAATTAACGGTCAAAAGATTACGGACAGATCTTCGTTAATAGCATATGGCGCGAAGCCCGCCCCACAAGGTCTTCTAGTATCTACCCTTGGTCTCCGGACGCCAGTTCAATCACGAATGAAAATCAAATGTATCGCAACAATCGATACACATAGACGAGAGCGTACCGTTGTCATTGGTAAATATTATATAGTGATAACAAAAAAAAAAAGAGTGCGTGTACTTATGTACGCGCGTAAGAAGTTATACTGTATTTTTATTAAATTTATTTATTTATTTAAATTTTAA
Protein
MTFKYQQFTQRKALISNFVFPVSICLRVVGISVPPLKQRGDSATLTCEYDLEGGKLYSVKWYRDNEEFYRYMPRLRPPQHAHQLDGVKVDLEKSTARRVHLRELTLKSRGLYRCEVSEEAPSFHSAQAENFMEIYYFPKESPRITGLEGPYNIKDMLDVNCSSARSFPAPELQWLINGQKITDRSSLIAYGAKPAPQGLLVSTLGLRTPVQSRMKIKCIATIDTHRRERTVVIGKYYIVITKKKRVRVLMYARKKLYCIFIKFIYLFKF

Summary

EMBL
NWSH01001337    PCG71626.1    ODYU01002241    SOQ39456.1    KQ461181    KPJ07630.1    + More
KQ459249    KPJ02436.1    ODYU01013069    SOQ59742.1    KQ460883    KPJ11293.1    KQ459586    KPI97990.1    BABH01040737    GBBI01002908    JAC15804.1    GFTR01004573    JAW11853.1    GEDC01026816    JAS10482.1    GDHC01010260    JAQ08369.1    GBRD01002739    JAG63082.1    GBHO01010372    JAG33232.1    GBRD01006479    JAG59342.1    GEZM01046463    JAV77222.1    NEVH01000613    PNF43246.1    DS235032    EEB10764.1    GEZM01046464    JAV77221.1    GEBQ01028361    GEBQ01020600    GEBQ01001677    JAT11616.1    JAT19377.1    JAT38300.1    ABLF02036004    AK342345    BAH72403.1    GGMS01010353    MBY79556.1    GGMR01013523    MBY26142.1    GECU01008057    JAS99649.1    GFXV01000920    MBW12725.1    GECU01024437    JAS83269.1    CH477660    EAT37632.1    GBYB01012897    JAG82664.1    AAAB01008987    EAA01225.6    EGK97487.1    EGK97488.1    EGK97489.1    GBYB01012896    JAG82663.1    AXCN02000315    AXCN02000319    CVRI01000010    CRK88747.1    JXUM01097211    JXUM01097212    KQ564324    KXJ72430.1    AXCM01011967    IAAA01031310    LAA08965.1    GFTR01004439    JAW11987.1    AXCM01004225    IAAA01015842    IAAA01015843    IAAA01015844    LAA03519.1    GEHC01000069    JAV47576.1    ADMH02001730    ETN61277.1    GEZM01096542    JAV54821.1    DS232530    EDS43050.1    GEZM01096543    JAV54819.1    GEDC01018948    GEDC01013263    JAS18350.1    JAS24035.1    JXUM01017467    KQ560484    KXJ82184.1    GEDC01015245    JAS22053.1    KZ288204    PBC33176.1    CH477196    EAT48379.1    DS232181    EDS36860.1    GEZM01096541    JAV54822.1    CAEY01000446    CVRI01000058    CRL02803.1    JXJN01012075    CH477249    EAT46097.1    ABJB010539985    ABJB010688061    ABJB010886870    ABJB011044012    DS820142    EEC11662.1    APCN01000915    LNIX01000002    OXA60444.1   
Pfam
PF08205   C2-set_2        + More
PF07686   V-set
PF00047   ig
PF13895   Ig_2
Interpro
IPR013162   CD80_C2-set        + More
IPR013783   Ig-like_fold       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR036179   Ig-like_dom_sf       
IPR013106   Ig_V-set       
IPR013151   Immunoglobulin       
SUPFAM
SSF48726   SSF48726       
Gene 3D
PDB
5XPW     E-value=6.41656e-07,     Score=126

Ontologies

Topology

Length:
269
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
19.21612
Exp number, first 60 AAs:
18.80921
Total prob of N-in:
0.92702
POSSIBLE N-term signal
sequence
inside
1  -  12
TMhelix
13  -  35
outside
36  -  269
 
 

Population Genetic Test Statistics

Pi
218.078112
Theta
178.464077
Tajima's D
0.838464
CLR
0
CSRT
0.611719414029299
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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