Gene

KWMTBOMO03510

Pre Gene Modal

BGIBMGA006244

Annotation

putative_Protein_toll_[Operophtera_brumata]

Location

Bomo_Chr6(+):10007850-10025425      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.054

CDS

ATGGGTCGCAAAATGCTGCGTTATTATTTGGCAGCTGTGCTACTTCAAGTGGTGGCCGCGACAAACATTTCATGTCCGACTGACGCCAATTGTACTTGTGGCGGTACCTTGGCTATCGAGCTTGACTGCAATATCGATGGAAGCGTTGTGAACATAAATCTAGTACCGGAGATTTACATCAATGTCAAATGTGAGAATGCAACGGCACTCGATTATAGCAAACTACCGAGATGTACAAATATAACTGATTCATTCCAATCCGTTAGCTTCAAGGACTGTCCATTACCGGAGACTTCTTTTAAAGATGTTTTAGACAACATGGGCGTCACTAAAACTATGGCACTAATCTTCCAGAATGCCAAGAATCTATCGGGATACTTAGATCGAAAACATTTCGCTGGATTACAAGATTTAACCAAACTATTATTGTCAATTAACGGAGTTATTCATCTACCAGACGACGCTTTTGTTGACATCAACAAACTTACTTGGTTGAACATAAGATCGAAAACTATATATCTGTCTGAGGAGCTATTTAAGCCCTTGGAAAGGCTGGAAACTTTAGAAATTAGTCACAACCACATGACTAATATAACTTCAAACTTGTTTTCTCATCTATCCTTCTTGAGGAAACTTTCGTTATGGCAGAGTAATGTTACCTGGTTTTCCCAGGACTTTTTCAACGGCGTAGACGTTCTCGAAGAATTAGATTTAAGTTCTAATGGACTTAACAAACTTCCGGCGACAATATTTAAGCCTCTCAAGAAATTAAAGAAACTCACTTTATTTTCGAACAAATTTTCATCTTTACCGAAGAACTTATTCATCGGCAACAACGAACTGGAAACTGTAGTTATTTTAAACAATGATGTTAAATTAAGGGTACTGCCGGAACGTTTGTTTGGAAATTTGCCCAATTTGAAGCAGGTTTACGTTCAACGAAGCGGTATCGAGGTCGTGCCACGCGACACGTTCAAGAACTCACCGGCAATTACCAACATATCGTTAGCGTTCAACGATTTAAAACGCCTCCCGGAGGAAGTGTTCAACAATCAGATCAATTTATTAAATTTAGATCTCAGTCACAACAAGATCTTTGATTTGGCAACGAGAACGTTTTCAACGTTGGTGCGACTCGAGATATTGAACTTGTGTAATAATCAACTTGTGTTTATTGATGGATCACTATTCTCTTCTTTGTTAAGCCTTATCGACCTGAATATAGAGAATAATAATTTAAAGATTATTACGTCGGATTTGTTTCGGAACAACAAACAGAGGATGTCTATTTCGTTGGCAAACAATAATCTCGACTTCGAGCAGACAGTGTACGCGAACAACTGTTTGTCTCTGGAACCGAGATCGCCATTTGCAAATACTTACAACTTGAAGCTATTGAATCTGAGTCATAACGCGTTCAGGATCAGTTTCGTGGACTGGTGGATTAATGGTCATGAAACCGTTGATGTCAGTCACAATGCAATTAAAACTCTCGTGGCTTACAATGAGTATTCGGATTTATACGAGGGTGTTACCAGAAAGCCACTCAAAGAACTGTGGGTTTTCAATAATCCCATTCAATGTGTTTGCAACAATTACATGTTCGTTGATCTTCTTCAAGACGTAACAAACCGTAAGATTATGGATGCACGCTTGTTCCGTTGCCCGAAATGGCAAATAACATTCTGCAGTATTCGTGTTCTAACGATTTCGGCCATTATTTTGGGCTTGTGTGTGATGTACGCGGTCATCACCATGGCGTATTATATATACAAGTGTCGAGCGTACGAGACTCTTAAGTGGAAGCTGTCTTTACTGTCGAAAAAGGGCATACGGATTATCGAACAAGAATTAATAATAAGATACTCAGAAAAGGACGAAGAGTTTGTAATGAAAGAGATACTGCCTACGTTAAAAAATGAGAAAAATTTGAAAGTGTACACAAACGCGATCAGGTGTCCCAGCGATATCAGCCCGGACAACCTGAAGACCTGCGTCAAGGATGCTTACAAGTACACCACCTTAATAGTTTTCTCCCCAAATTATTTGACGACAGCCTACAGCAACGTGGACATCAAGAAAATACACAGCGAAATGTTGAAGGCTGAATACACTGTGTACGTTTTTGTGGACATCGGCCCTGAGAACTTCCTGTACGTTTTCCTGAAGAGCCAACGCGATACGAACACAATGGTGGTTTGGGGCGAAGCTAATTTTTGGTTAAAGTTCCTGGTGACCTTGGCTCAATACGACATTACCTATCCTGATCTTAACAAGATTTCCGATAAAATAACTTTTGCCGAAGTCGAGGAGAATGATAAAAAGAATTGTCACCTCTGTTACTTAGGGACTCACCGTTGCCACAGCTGCTGCTACGGTATTATTCTAGACCAGAGTCTAGTTTGA

Protein

MGRKMLRYYLAAVLLQVVAATNISCPTDANCTCGGTLAIELDCNIDGSVVNINLVPEIYINVKCENATALDYSKLPRCTNITDSFQSVSFKDCPLPETSFKDVLDNMGVTKTMALIFQNAKNLSGYLDRKHFAGLQDLTKLLLSINGVIHLPDDAFVDINKLTWLNIRSKTIYLSEELFKPLERLETLEISHNHMTNITSNLFSHLSFLRKLSLWQSNVTWFSQDFFNGVDVLEELDLSSNGLNKLPATIFKPLKKLKKLTLFSNKFSSLPKNLFIGNNELETVVILNNDVKLRVLPERLFGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVFNNQINLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQLVFIDGSLFSSLLSLIDLNIENNNLKIITSDLFRNNKQRMSISLANNNLDFEQTVYANNCLSLEPRSPFANTYNLKLLNLSHNAFRISFVDWWINGHETVDVSHNAIKTLVAYNEYSDLYEGVTRKPLKELWVFNNPIQCVCNNYMFVDLLQDVTNRKIMDARLFRCPKWQITFCSIRVLTISAIILGLCVMYAVITMAYYIYKCRAYETLKWKLSLLSKKGIRIIEQELIIRYSEKDEEFVMKEILPTLKNEKNLKVYTNAIRCPSDISPDNLKTCVKDAYKYTTLIVFSPNYLTTAYSNVDIKKIHSEMLKAEYTVYVFVDIGPENFLYVFLKSQRDTNTMVVWGEANFWLKFLVTLAQYDITYPDLNKISDKITFAEVEENDKKNCHLCYLGTHRCHSCCYGIILDQSLV

Similarity

Belongs to the Toll-like receptor family.

Uniprot

H9J9Q1   A0A2W1BU69   A0A2A4JPC4   A0A2H1WSD4   A0A0L7LDR6   A0A212FFN9   + More
A0A194QXR0   A0A1I8PSW5   A0A067R3H7   A0A2J7QHR7   A0A2J7QHL1   A0A1A9ZL81   A0A1A9VTQ4   A0A1B0GER6   A0A1A9XZE1   A0A182Y4Y2   A0A182M8X8   A0A182GPV4   A0A2C9GWS9   A0A2C9H6H6   A0A182QPS8   A0A182PVM9   Q171J8   A0A182KC65   Q8MQU8   Q8MQU7   A0A182UFK6   A0A154NYN7   A0A0D3QDC7   Q8WRE5   A0A0D3QDD7   A0A0D3QDL3   A0A0D3QDL8   A0A0D3QCR2   A0A0D3QCQ2   A0A0D3QD03   A0A182IDR8   A0A0D3QCQ7   A0A182XNF0   Q17F73   A0A2C9GH57   E9IK94   A0A1A9W5W9   A0A084WPQ0   A0A195CSW9   A0A336MUL7  

Pubmed

19121390    28756777    26227816    22118469    26354079    24845553    + More
25244985    26483478    17510324    12542637    25552603    12213252    12364791    14747013    17210077    21282665    24438588   

EMBL

BABH01033973    BABH01033974    KZ149899    PZC78622.1    NWSH01000850    PCG73851.1    + More
ODYU01010702    SOQ55980.1    JTDY01001536    KOB73622.1    AGBW02008793    OWR52546.1    KQ461155    KPJ08366.1    KK852931    KDR13629.1    NEVH01013973    PNF28083.1    PNF28085.1    CCAG010012576    CCAG010012577    CCAG010012578    CCAG010012579    AXCM01000253    JXUM01001876    KQ560129    KXJ84298.1    AXCN02002028    CH477452    EAT40676.1    AY124196    AAM97775.1    AY124197    AAM97776.1    KQ434773    KZC03990.1    KP274533    KP274534    KP274535    KP274536    KP274537    KP274538    KP274539    KP274540    KP274541    KP274544    KP274551    AJC98679.1    AJC98680.1    AJC98681.1    AJC98682.1    AJC98683.1    AJC98684.1    AJC98685.1    AJC98686.1    AJC98687.1    AJC98690.1    AJC98697.1    AF444780    AAAB01008811    AAL37901.1    EAA45376.1    KP274549    AJC98695.1    KP274545    KP274548    KP274550    AJC98691.1    AJC98694.1    AJC98696.1    KP274553    AJC98699.1    KP274552    AJC98698.1    KP274542    AJC98688.1    KP274543    KP274546    AJC98689.1    AJC98692.1    APCN01004779    APCN01004780    KP274547    AJC98693.1    CH477273    EAT45212.2    GL763924    EFZ19053.1    ATLV01025119    KE525369    KFB52194.1    KQ977304    KYN03798.1    UFQS01002797    UFQT01002797    SSX14685.1    SSX34082.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000007151    UP000053240    UP000095300    + More
UP000027135    UP000235965    UP000092445    UP000078200    UP000092444    UP000092443    UP000076408    UP000075883    UP000069940    UP000249989    UP000075900    UP000075920    UP000075886    UP000075885    UP000008820    UP000075881    UP000075902    UP000076502    UP000007062    UP000075903    UP000075840    UP000076407    UP000069272    UP000091820    UP000030765    UP000078542   

PRIDE

H9J9Q1   

Pfam

PF13306   LRR_5        + More
PF13855   LRR_8
PF01462   LRRNT
PF01582   TIR
PF12366   Casc1
PF13676   TIR_2
PF01463   LRRCT

Interpro

IPR035897   Toll_tir_struct_dom_sf        + More
IPR032675   LRR_dom_sf       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR001611   Leu-rich_rpt       
IPR026906   LRR_5       
IPR000157   TIR_dom       
IPR000483   Cys-rich_flank_reg_C       
IPR000372   LRRNT       
IPR022110   Casc1_domain       

SUPFAM

SSF52200   SSF52200       

Gene 3D

3.40.50.10140     3.80.10.10    

ProteinModelPortal

H9J9Q1   A0A2W1BU69   A0A2A4JPC4   A0A2H1WSD4   A0A0L7LDR6   A0A212FFN9   + More
A0A194QXR0   A0A1I8PSW5   A0A067R3H7   A0A2J7QHR7   A0A2J7QHL1   A0A1A9ZL81   A0A1A9VTQ4   A0A1B0GER6   A0A1A9XZE1   A0A182Y4Y2   A0A182M8X8   A0A182GPV4   A0A2C9GWS9   A0A2C9H6H6   A0A182QPS8   A0A182PVM9   Q171J8   A0A182KC65   Q8MQU8   Q8MQU7   A0A182UFK6   A0A154NYN7   A0A0D3QDC7   Q8WRE5   A0A0D3QDD7   A0A0D3QDL3   A0A0D3QDL8   A0A0D3QCR2   A0A0D3QCQ2   A0A0D3QD03   A0A182IDR8   A0A0D3QCQ7   A0A182XNF0   Q17F73   A0A2C9GH57   E9IK94   A0A1A9W5W9   A0A084WPQ0   A0A195CSW9   A0A336MUL7  

PDB

4LXS     E-value=2.41177e-46,     Score=471

KEGG

101738250    no KO assigned | (RefSeq) protein toll-like

GO

GO:0016021   GO:0007165   GO:0045087   GO:0005515   GO:0008270   GO:0016020   GO:0004352   GO:0000287   GO:0003723   GO:0006270   GO:0042555   GO:0048384  

SignalP

Position:   1 - 20,         Likelihood:  0.990706

 

 

Length:

801

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

27.22176

Exp number, first 60 AAs:

0.3185

Total prob of N-in:

0.03247

outside

1  -  568

TMhelix

569  -  591

inside

592  -  801

 

 

Pi

192.936444

Theta

157.594721

Tajima's D

0.045479

CLR

1.034891

CSRT

0.387230638468077

Interpretation

Uncertain