SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03509  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006344
Annotation
PREDICTED:_uncharacterized_protein_LOC106106265_[Papilio_polytes]
Location in the cell
Extracellular   Reliability : 1.813 Nuclear   Reliability : 1.732
 

Sequence

CDS
ATGTCTAGATATCCATACGGAAACCCAAATTATCCCCCACCCCAAGGACCAATTTACCCATCGCTCTACAATCCTGCAAATGCTCCACCTCCTGGCCAGCCTAATGTACCACCAAATTATCCTGTGCCTGGTTATAATGTTCAACATTCATTCCAACCCGGGTATAGTCTCGGACAACAACCTGCAGCAATGTCTTACCCAGGAATCACGCCAGCACCAACTGCACCTCGCGGCCATGTGACACCACATGGTGCATTTGGTTATCAAAGCTATCCTTATGTGACACCAACCCAGAGCTATGATACAACAATTGAATGGGTTCCTACAACTCCTCAAAATGCTTCGATACTTAGCGAGAAGGCAGTGGTGGCTGGTTATGAAGGTCACGATGGTAGTCCCCTTTGGGTGATCAGGTCTCAGTTCCAAGGAGATCTAATCCCAGGCAAGTTATGCGTGAAACATTTCTCTGCATATGTTCCGTGGGGAGGAAAAGAAAATGCCGTTCAAAACATTGAGGTGTGCTGTGCCCGTCCTGAAAGGGTCAGGTGGTTGGAAAGCCGTGATGGTGTGATTCCTCCTAATGCTGTAATGGGTGGCAACACTGCAGCTGGTGAACCTCTGTATATTGGCAGGGCTAGGGAACAGGGATCATTGACCCCTGGAAAGGTGCACCCGAGTCACAAAGTGTTGTACATATCGTTCGCCGGCCAAGAACTACCTCATAAGATATAA
Protein
MSRYPYGNPNYPPPQGPIYPSLYNPANAPPPGQPNVPPNYPVPGYNVQHSFQPGYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTPQNASILSEKAVVAGYEGHDGSPLWVIRSQFQGDLIPGKLCVKHFSAYVPWGGKENAVQNIEVCCARPERVRWLESRDGVIPPNAVMGGNTAAGEPLYIGRAREQGSLTPGKVHPSHKVLYISFAGQELPHKI

Summary

Pfam
PF11901   DUF3421        + More
PF12248   Methyltransf_FA
Interpro
IPR006616   DM9_repeat        + More
IPR024518   DUF3421       
IPR022041   Methyltransf_FA       
PDB
5MH1     E-value=4.68052e-14,     Score=187

Ontologies

Topology

Length:
243
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00121
Exp number, first 60 AAs:
0
Total prob of N-in:
0.06646
outside
1  -  243
 
 

Population Genetic Test Statistics

Pi
135.138917
Theta
124.058914
Tajima's D
-0.275566
CLR
10.957447
CSRT
0.297835108244588
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 VYEIICTV 95.83 5e-10
26280517 DFIWNIFR 95.83 5e-10
27102218 ENAVQNIEVCCARPER 95.83 5e-10
28467696 DGVIICK 95.83 5e-10
26822097 AVVAGYEGHDGSPIWVIR 100.00 2e-06
26280517 EMAYDHIWMEK 100.00 2e-06
25044914 ENAPYGEYGGWHK 100.00 2e-06
27102218 AVVAGYEGHDGSPIWVIR 100.00 2e-06
28467696 ENAPYGEYGGWHK 100.00 2e-06
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