SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03499
Pre Gene Modal
BGIBMGA006345
Annotation
PREDICTED:_DNA_mismatch_repair_protein_Mlh3-like_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.149
 

Sequence

CDS
ATGATTATAAATGAAACCATACCTCTGTCGATTAGTATTGATCGTGATAATTTCTCATACAACGACTTAACTTTACCAAATACACAGGAAAACCCCAACATAGATAATTTAATAAATATAGATCCTATGGATATTTGTGAAACAGTAATGAGCGGAGTTGAGAAGGAAATAACAACATTGAGCTCTTCTTCAAAAACAGAAATGAATAATAAAAATAATAGTCTTGAATGTCCCAATATCAATATTAATTTGATCGATAATGCAAACACAAGATTACGATCATCGTATTTCGATAATCGAACTGCTGATAATACAAAATCAGATAAAATAAACAAACTCGAATCAGTTGCCCAAGACATATGCGTTGCTACTGAAATCCATTTTGGTATGAAAAGCAGATTACGATTTATACCAAAAGGTATGTCACAAATATTTGAAAACTGCAATTCTAAAGGAGTATGTAGTTACAATTTCGAAGAGGACTACTTTGAAAATAATTTGTATGACGATTTTGATAATAACGTACAGATGAATTCCAATATGTTTGATCCAATATTACAAGAAGTATGGAATAATGCTACTACGGGTATTGAGAAATTAACTAAAAAAATCGACAAAGAAAACACTTCTCTTAAATTCGACGCTCAATCCATAAAAAGCGCAAAAGTTTTAGGTCAAGTTGACTATAAATTTATTGCTGCTATTGTCAATGGTAAAAACTATAACAAAAAGGAAGCGGTTGAATCGTTGGTATTATTTGATCAACATGCTGTCGATGAAAGGATAAGACTTGAGAAAAACCTATCAGGTATTTTGGTAGCTACATTGGTGGCCATATAA
Protein
MIINETIPLSISIDRDNFSYNDLTLPNTQENPNIDNLINIDPMDICETVMSGVEKEITTLSSSSKTEMNNKNNSLECPNININLIDNANTRLRSSYFDNRTADNTKSDKINKLESVAQDICVATEIHFGMKSRLRFIPKGMSQIFENCNSKGVCSYNFEEDYFENNLYDDFDNNVQMNSNMFDPILQEVWNNATTGIEKLTKKIDKENTSLKFDAQSIKSAKVLGQVDYKFIAAIVNGKNYNKKEAVESLVLFDQHAVDERIRLEKNLSGILVATLVAI

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
279
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00011
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01347
outside
1  -  279
 
 

Population Genetic Test Statistics

Pi
250.761972
Theta
203.892693
Tajima's D
0.677833
CLR
0.732313
CSRT
0.563621818909054
Interpretation
Uncertain
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