Gene

KWMTBOMO03498

Annotation

PREDICTED:_DNA_mismatch_repair_protein_Mlh3-like_[Amyelois_transitella]

Location

Bomo_Chr6(-):9686365-9687309      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.09 Nuclear   Reliability : 1.463

CDS

ATGCAATATTTACAAAAGCAGCAATGGAAAAAAGTTAATATTGATGACGTTCATTTGACATTAAATAAGGACGAAATACTTTATCTTCACAATTACAAAGATAAGCTCTCCCGGTTGGGTATAGAATGGAATATATTGGGTAATGACCAAATAATACTTAGTTCTGTACCACAATCAATATTGGGAAAAATCCCTAGACAGATGGAGAAAGTCGTAGAGGCTGTAAAAAAAATTATAGCCGAAGAAATAAACATCATTAAACAACAAAGTGGTTGCATTTCTTTATACCCAAAAGCAATTATGGATTTAGTTTTCAGTGAGGCCTGCAGATACGCCATAAAGTTCGGCGATAAGCTGTCAATGGGACAATGTGAAGACATGCTGAATGCTCTATCGGAATGTAAAATGCCATTCCAGTGTGCTCACGGTAGACCCGTCATGGCTGTTCTTATCGATGTTGTAAAAAATAACAATGAGTACAAGGTGATTTTGTTTTCGAAAAACTAA

Protein

MQYLQKQQWKKVNIDDVHLTLNKDEILYLHNYKDKLSRLGIEWNILGNDQIILSSVPQSILGKIPRQMEKVVEAVKKIIAEEINIIKQQSGCISLYPKAIMDLVFSEACRYAIKFGDKLSMGQCEDMLNALSECKMPFQCAHGRPVMAVLIDVVKNNNEYKVILFSKN

Uniprot

H9JA00   A0A2A4JKW3   A0A2H1WC23   A0A2W1C378   A0A194QSS7   A0A194QAI5   + More
A0A212EIX6   A0A1B6KD10   A0A210QP30   A0A2P6L8F0   A0A1L7TXQ8   S0DHL0   A0A2H3RDI0   A0A365MS39   A0A2K0W696   W7MSA4   W7MRZ9   A0A1L7V3W9   A0A0I9XRW3   A0A2P8ZD23   A0A1B6HUW3   A0A1Q9DM31   A0A2J7R552   A0A067RE66   A0A1B6IY17   V3ZFR6   X0AR52   A0A0D2Y485   B7PAH6   M4SZP6   A0A1B6CA07   A0A1B6DRH8   A0A1B6CMH0   T1JGR5   K0K6B6   A0A2Z5U613   K1QPR5   A0A1E3P448   A0A1S3I087   A0A1S3IIN5   A0A226EWP0   R7TC97  

Pubmed

19121390    28756777    26354079    22118469    28812685    28040774    + More
23825955    20237561    29403074    24845553    23254933    25081257    23487324    23193139    26760975    22992520    27535936    26383154   

EMBL

BABH01009467    BABH01009468    NWSH01001141    PCG72426.1    ODYU01007651    SOQ50610.1    + More
KZ149899    PZC78613.1    KQ461155    KPJ08374.1    KQ459249    KPJ02444.1    AGBW02014560    OWR41434.1    GEBQ01030638    JAT09339.1    NEDP02002593    OWF50497.1    MWRG01001026    PRD34853.1    FCQH01000013    CVL02819.1    HF679023    CCT61684.1    FMJU01000001    SCN74100.1    PKMI01000050    RBA11295.1    MTQA01000123    PNP77801.1    DS022254    EWG50515.1    EWG50514.1    FJOF01000001    CZR35593.1    JRVG01000105    KLO86606.1    PYGN01000096    PSN54405.1    GECU01029247    JAS78459.1    LSRX01000474    OLP96244.1    NEVH01007395    PNF35962.1    KK852526    KDR22057.1    GECU01015903    JAS91803.1    KB203827    ESO82947.1    JH659329    EXK46654.1    DS231709    KNB11036.1    ABJB010018134    ABJB010172803    ABJB010711525    ABJB010973530    DS671206    EEC03598.1    JX156254    AGH55912.1    GEDC01026976    JAS10322.1    GEDC01009026    JAS28272.1    GEDC01022652    JAS14646.1    JH432211    CAIF01000001    CCH40485.1    FX985866    BBA93753.1    JH816265    EKC38947.1    KV454210    ODQ59672.1    LNIX01000001    OXA62012.1    AMQN01013855    KB310551    ELT91309.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000242188    + More
UP000184255    UP000016800    UP000219504    UP000251714    UP000236664    UP000009096    UP000183971    UP000036287    UP000245037    UP000235965    UP000027135    UP000030746    UP000030703    UP000009097    UP000001555    UP000009328    UP000005408    UP000094112    UP000085678    UP000198287    UP000014760   

PRIDE

H9JA00   

Pfam

PF08676   MutL_C        + More
PF01119   DNA_mis_repair
PF02518   HATPase_c

Interpro

IPR036890   HATPase_C_sf        + More
IPR042120   MutL_C_dimsub       
IPR014790   MutL_C       
IPR028830   Mlh3       
IPR037198   MutL_C_sf       
IPR042121   MutL_C_regsub       
IPR003594   HATPase_C       
IPR038973   MutL/Mlh/Pms       
IPR020568   Ribosomal_S5_D2-typ_fold       
IPR013507   DNA_mismatch_S5_2-like       
IPR014721   Ribosomal_S5_D2-typ_fold_subgr       
IPR014762   DNA_mismatch_repair_CS       
IPR036020   WW_dom_sf       
IPR001202   WW_dom       

SUPFAM

SSF118116   SSF118116        + More
SSF55874   SSF55874       
SSF54211   SSF54211       
SSF51045   SSF51045       

Gene 3D

2.30.42.20     3.30.1370.100     3.30.565.10     3.30.230.10    

CDD

cd00075  HATPase_c
cd00201  WW

ProteinModelPortal

H9JA00   A0A2A4JKW3   A0A2H1WC23   A0A2W1C378   A0A194QSS7   A0A194QAI5   + More
A0A212EIX6   A0A1B6KD10   A0A210QP30   A0A2P6L8F0   A0A1L7TXQ8   S0DHL0   A0A2H3RDI0   A0A365MS39   A0A2K0W696   W7MSA4   W7MRZ9   A0A1L7V3W9   A0A0I9XRW3   A0A2P8ZD23   A0A1B6HUW3   A0A1Q9DM31   A0A2J7R552   A0A067RE66   A0A1B6IY17   V3ZFR6   X0AR52   A0A0D2Y485   B7PAH6   M4SZP6   A0A1B6CA07   A0A1B6DRH8   A0A1B6CMH0   T1JGR5   K0K6B6   A0A2Z5U613   K1QPR5   A0A1E3P448   A0A1S3I087   A0A1S3IIN5   A0A226EWP0   R7TC97  

PDB

4FMO     E-value=0.0163646,     Score=84

KEGG

101735433    K08739 DNA mismatch repair protein MLH3 | (RefSeq) uncharacterized LOC101735433

GO

GO:0016887   GO:0007131   GO:0005524   GO:0006298   GO:0032300   GO:0030983   GO:0016021   GO:0006260   GO:0003676   GO:0004352   GO:0000287   GO:0003723   GO:0006270   GO:0042555   GO:0048384  

PANTHER

PTHR10073:SF47   PTHR10073  

Length:

168

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0164

Exp number, first 60 AAs:

0.0116

Total prob of N-in:

0.47646

outside

1  -  168

 

 

Pi

292.43036

Theta

208.600343

Tajima's D

1.474364

CLR

0.00098

CSRT

0.775661216939153

Interpretation

Uncertain