SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03497
Annotation
PREDICTED:_chymotrypsin-2-like_[Papilio_xuthus]
Location in the cell
Mitochondrial   Reliability : 1.153 Peroxisomal   Reliability : 1.143
 

Sequence

CDS
ATGTTTTTTTTAAGATATCATTTTGTTACTGCTATTATTCTTTCTTGTACGGCGAAATTTGTATCATCGACCGATGTACATCGCATCGTTGGTGGTGATTATGCACCACCAAAGTTCGGCCTGTTTCATGCGTCGCTCCAAAATGTCTCGGGTCACCATGTCTGCGGTGGAGCTATAGTATCTAAATGGCATGTTGTAACTGCTGCTCATTGCGTGAAAGAAGCACAACCTCGCTACATTAAAATTGTTGCCGGAACAGCAGACTTGGATGCTGGCGGAAAAAGCTACGACACATTTGCAGTAAACGTTTTCCGACAATTCGAGTTCATTAAAAGAAGTAACGATGTTGCTCTTTTGACTATTAACGGAGAATTCGATTTACTAAAAGTTACAGTCTTGAAGCCAAGCAAGGCAATTTTGAAGGAAGACGATCCAGTTACTTTGATTGGTTTTGGCGCTAAAAAACCGCATGGAGAATCAAGTAGAGTTTTGCGATACCTAAATCTGTCTGTATTTAATCAACAAACATGTAGATATGCGATGAGATACACCAGAAATGTAACGGAAACCATGTTTTGTACTTTTAAACGTATCGGTCAAGGAACCTGTCACGGCGATTCAGGAAGTCCCATTACAAGAAATAATGAACTCGTCGGACTGGTGTCCTGGGGAATACCATGTGCTGTTGGGTTTCCCGACGTACACACCAGAATAGCCCCGTATATTGACTGGATCGAAACGGTTGTTCGAACTCACGTTTGCAAGTTAAAGTTGATAGCAAAAGCTAAAATCGCTTCAGAAAAACTCGGATTACTTAAGTAG
Protein
MFFLRYHFVTAIILSCTAKFVSSTDVHRIVGGDYAPPKFGLFHASLQNVSGHHVCGGAIVSKWHVVTAAHCVKEAQPRYIKIVAGTADLDAGGKSYDTFAVNVFRQFEFIKRSNDVALLTINGEFDLLKVTVLKPSKAILKEDDPVTLIGFGAKKPHGESSRVLRYLNLSVFNQQTCRYAMRYTRNVTETMFCTFKRIGQGTCHGDSGSPITRNNELVGLVSWGIPCAVGFPDVHTRIAPYIDWIETVVRTHVCKLKLIAKAKIASEKLGLLK

Summary

Similarity
Belongs to the peptidase S1 family.
EMBL
BABH01009467    KQ461155    KPJ08375.1    JQ904143    AFM77773.1    ODYU01007651    + More
SOQ50611.1    AGBW02014560    OWR41433.1    JN315758    AFK64822.1    KZ149899    PZC78600.1    NWSH01001141    PCG72425.1    JTDY01000388    KOB77421.1    GANO01003159    JAB56712.1    AJVK01029631    GFDG01001162    JAV17637.1    GFDG01001163    JAV17636.1    GFDG01001166    JAV17633.1    CH933806    EDW14763.1    GFDG01001167    JAV17632.1    OUUW01000005    SPP80400.1    CH479198    EDW28002.1    JRES01000115    KNC34044.1    EU035826    ABV44728.1    KQ982174    KYQ59316.1    CM000070    EAL27112.2    EDW28001.1    CH964232    EDW81686.2    CP012526    ALC46482.1    GL888053    EGI68707.1    ADTU01008199    KQ435756    KOX75917.1    GDHF01011867    JAI40447.1    KNC34037.1    KQ976394    KYM93148.1    GBXI01009810    JAD04482.1    ATLV01023228    KE525341    KFB48664.1    EU124583    ABV60301.1    EAL27117.3    CH902617    EDV42200.1    SPP80399.1    GL438568    EFN68767.1    AE014297    AAN13736.2    KNC34034.1    BT022930    AAY55346.1    KZ150244    PZC71884.1    EDV42199.1    ADMH02000310    ETN67024.1    CH916377    EDV90654.1    CH954181    EDV48753.1    AGBW02010081    OWR49200.1    GAKP01003887    JAC55065.1    AJWK01017225    UFQT01000369    SSX23608.1    CM000364    EDX12605.1    KQ971342    EFA04622.1    GDHF01025083    JAI27231.1    AF487334    AAL93243.1    KNC34036.1    KQ981039    KYN10142.1    CM000160    EDW96939.1    EDW81685.1    GAPW01003508    JAC10090.1    AAF55395.1    DS232137    EDS35880.1    GAKP01002411    JAC56541.1    EDV48754.1    EDW97705.1    EDW14768.1    FN547063    CBC01177.1    JXJN01019325    CH480827    EDW44769.1    EDX12599.1    LBMM01004589    KMQ92263.1    AF237415    AAF43707.1    EDV90648.1    CAQQ02185046    KQ977636    KYN01157.1    GFDF01005371    JAV08713.1    GAMC01002246    JAC04310.1    GFDF01005372    JAV08712.1    OWR49201.1    GL769036    EFZ10800.1    NWSH01000497    PCG76022.1    GEHC01000393    JAV47252.1   
Pfam
PF00089   Trypsin
Interpro
IPR033116   TRYPSIN_SER        + More
IPR001254   Trypsin_dom       
IPR018114   TRYPSIN_HIS       
IPR009003   Peptidase_S1_PA       
IPR001314   Peptidase_S1A       
IPR012224   Pept_S1A_FX       
SUPFAM
SSF50494   SSF50494       
PDB
1EQ9     E-value=1.52928e-30,     Score=329

Ontologies

Topology

SignalP
Position:   1 - 23,         Likelihood:  0.807148
 
 
Length:
273
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.15241
Exp number, first 60 AAs:
0.1445
Total prob of N-in:
0.01841
outside
1  -  273
 
 

Population Genetic Test Statistics

Pi
163.523398
Theta
159.984838
Tajima's D
0.130671
CLR
28.109579
CSRT
0.401129943502825
Interpretation
Uncertain
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