Gene

KWMTBOMO03487

Annotation

PREDICTED:_protein_held_out_wings_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr6(+):9250107-9323818      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.514 Nuclear   Reliability : 1.102

CDS

ATGGTGACTACGCTCACAGAAAAAGTGTATGTGCCAGTCAAAGAACATCCCGATTTCAATTTCGTGGGAAGGATTCTAGGACCCAGAGGTATGACCGCAAAACAGCTGGAACAAGAAACAGGGTGCAAAATTATGGTCAGAGGAAAAGGGTCGATGAGGGACAAGAAAAAGGAAGATGCAAACAGGGGCAAACCCAATTGGGAACACCTAGCAGATGACCTCCACGTTCTGCTGACAGTTGAAGATACTGAAAACAGAGCCAAGATAAAGCTAGCGAGGGCCGTTGATGAAGTGAAGCGTCTCCTTGTGCCACAAGCTGACGGTGAAGATGAACTGAAGAAGCGCCAGTTGATGGAGTTGGCGATCATAAATGGAACTTACCGTGATTCCAGCTCGAAGGTGTCCGTTCCTGTGAACGGTCAGTGCCTAATAACTGACGAGGAATGGCGGCGCGTTGCAGCGGCGGCAGCCGAGACTCAGCGTTTGCTGGCACCAGGGGGCGTGGGCGGGGTGGCCCTGCGCACTCCCGCGCCCCTCGGCGCGCCCCTCATCCTGTCCCCTCGCATGTCCGCGCCAGCTCAACCCGGCCTTCTCAACGGGGCAGGGGCGGGAGCGGCGGCCGGCCTGCTGTCTCCGGGCGAGCCCGCGCATCAGCTGATCTACGCGTCGCCCTACGACTACGCGAACTACGCAGCTCTCACCGCGGCCGCGAACCCTCTGCTCGCCACGGAGTACGCCGCTGCTGATCATGCCGGTGTGGTGCGGAGGGCGGGGCGAGTCGCGATGAGGGAGCACCCCTACCAACGCACGGCCTTACCGGCGCCTTAA

Protein

MVTTLTEKVYVPVKEHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLADDLHVLLTVEDTENRAKIKLARAVDEVKRLLVPQADGEDELKKRQLMELAIINGTYRDSSSKVSVPVNGQCLITDEEWRRVAAAAAETQRLLAPGGVGGVALRTPAPLGAPLILSPRMSAPAQPGLLNGAGAGAAAGLLSPGEPAHQLIYASPYDYANYAALTAAANPLLATEYAAADHAGVVRRAGRVAMREHPYQRTALPAP

Uniprot

A0A2W1C369   A0A2A4JN60   A0A2A4JLI9   A0A194RQ63   S4PLE9   A0A2A4JLZ6   + More
A0A2A4JN30   A0A2A4JN54   A0A212EIX1   A0A2H1WV98   A0A1W4WTR5   N6UAX0   A0A194Q109   A0A0L7LQX0   A0A1W4WTR2   A0A1L8DGX2   B4NHR7   U5ERZ3   B4K6L5   A0A0L7QJT4   A0A0Q9XCC9   A0A0Q9WVE0   A0A3B0K9Q1   B4JRM0   B4M0M8   A0A0Q9X1V2   B4G314   A0A0K8V329   A0A1B6MTS9   A0A034VRQ6   A0A0K8U0M7   A0A0K8UR47   B3P7N6   A0A0P8ZYV7   A0A0Q9XBX3   A0A0Q9WFQ1   Q297U1   A0A0R3NHA9   A0A0P8YLR8   B3LVL6   A0A0R3NHJ4   A0A0P9C8K6   A0A0Q9WF42   A0A0P8XYV5   A0A0P8XYF7   A0A0R3NN08   A0A182PVU3   A0A1J1J5M5   A0A182U5H2   A0A182I7I4   A0A182LS51   A0A182VNH4   A0A182WXM0   A0A182RZB5   A0A182LMK0   A0A182WGB8   A0A146LT23   A0A2M4AL17   A0A182QCU5   A0A1S4GZS9   A0A084WQK6  

Pubmed

28756777    26354079    23622113    22118469    23537049    26227816    + More
17994087    18057021    25348373    15632085    23185243    20966253    26823975    12364791    24438588   

EMBL

KZ149899    PZC78603.1    NWSH01001063    PCG72840.1    PCG72841.1    KQ459896    + More
KPJ19460.1    GAIX01000626    JAA91934.1    PCG72839.1    PCG72843.1    PCG72842.1    AGBW02014560    OWR41425.1    ODYU01011319    SOQ56990.1    APGK01042241    APGK01042242    APGK01042243    APGK01042244    APGK01042245    KB741002    ENN75782.1    KQ459583    KPI98674.1    JTDY01000301    KOB77804.1    GFDF01008376    JAV05708.1    CH964272    EDW84677.1    GANO01003491    JAB56380.1    CH933806    EDW16315.1    KQ415041    KOC58878.1    KRG02048.1    KRG02049.1    KRG00095.1    OUUW01000005    SPP80278.1    CH916373    EDV94410.1    CH940650    EDW67320.1    KRG02047.1    CH479179    EDW24209.1    GDHF01019078    JAI33236.1    GEBQ01000659    JAT39318.1    GAKP01013808    JAC45144.1    GDHF01032216    GDHF01029019    GDHF01028658    GDHF01023321    JAI20098.1    JAI23295.1    JAI23656.1    JAI28993.1    GDHF01023326    JAI28988.1    CH954182    EDV54197.1    CH902617    KPU79807.1    KRG02046.1    KRF83242.1    CM000070    EAL28114.3    KRT00466.1    KPU79805.1    EDV42586.1    KRT00468.1    KPU79806.1    KRF83241.1    KRF83244.1    KRF83245.1    KPU79802.1    KPU79804.1    KPU79803.1    KRT00467.1    KRT00469.1    CVRI01000070    CRL07100.1    APCN01003407    AXCM01004588    GDHC01008753    JAQ09876.1    GGFK01007987    MBW41308.1    AXCN02000736    AAAB01008984    ATLV01025637    KE525396    KFB52500.1   

Proteomes

UP000218220    UP000053240    UP000007151    UP000192223    UP000019118    UP000053268    + More
UP000037510    UP000007798    UP000009192    UP000053825    UP000268350    UP000001070    UP000008792    UP000008744    UP000008711    UP000007801    UP000001819    UP000075885    UP000183832    UP000075902    UP000075840    UP000075883    UP000075903    UP000076407    UP000075900    UP000075882    UP000075920    UP000075886    UP000030765   

Pfam

PF00013   KH_1        + More
PF16544   STAR_dimer

Interpro

IPR004088   KH_dom_type_1        + More
IPR032377   STAR_dimer       
IPR004087   KH_dom       
IPR036612   KH_dom_type_1_sf       

SUPFAM

SSF54791   SSF54791       

Gene 3D

3.30.1370.10    

ProteinModelPortal

A0A2W1C369   A0A2A4JN60   A0A2A4JLI9   A0A194RQ63   S4PLE9   A0A2A4JLZ6   + More
A0A2A4JN30   A0A2A4JN54   A0A212EIX1   A0A2H1WV98   A0A1W4WTR5   N6UAX0   A0A194Q109   A0A0L7LQX0   A0A1W4WTR2   A0A1L8DGX2   B4NHR7   U5ERZ3   B4K6L5   A0A0L7QJT4   A0A0Q9XCC9   A0A0Q9WVE0   A0A3B0K9Q1   B4JRM0   B4M0M8   A0A0Q9X1V2   B4G314   A0A0K8V329   A0A1B6MTS9   A0A034VRQ6   A0A0K8U0M7   A0A0K8UR47   B3P7N6   A0A0P8ZYV7   A0A0Q9XBX3   A0A0Q9WFQ1   Q297U1   A0A0R3NHA9   A0A0P8YLR8   B3LVL6   A0A0R3NHJ4   A0A0P9C8K6   A0A0Q9WF42   A0A0P8XYV5   A0A0P8XYF7   A0A0R3NN08   A0A182PVU3   A0A1J1J5M5   A0A182U5H2   A0A182I7I4   A0A182LS51   A0A182VNH4   A0A182WXM0   A0A182RZB5   A0A182LMK0   A0A182WGB8   A0A146LT23   A0A2M4AL17   A0A182QCU5   A0A1S4GZS9   A0A084WQK6  

PDB

4JVH     E-value=3.31162e-54,     Score=533

KEGG

101736543    K14945 protein quaking | (RefSeq) protein held out wings

GO

GO:0003727   GO:0006417   GO:0003723   GO:0003676   GO:0015074   GO:0004352   GO:0000287   GO:0006270   GO:0042555   GO:0048384  

Length:

275

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0902400000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.07982

outside

1  -  275

 

 

Pi

223.430025

Theta

185.310513

Tajima's D

0.445936

CLR

0.592391

CSRT

0.495825208739563

Interpretation

Uncertain