Gene

KWMTBOMO03483

Pre Gene Modal

BGIBMGA006354

Annotation

PREDICTED:_lachesin-like_[Bombyx_mori]

Location

Bomo_Chr6(-):9059500-9083156      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.418 Nuclear   Reliability : 1.751

CDS

ATGGTGGCTCTGAACCCTCGCCTATCCGTCACGTACAATAACCACAATACGTGGAAACTGCGCGTCAGCAACGTGCAGCCGAACGATTCCGGTACATACATGTGTCAAGTCAACACTGATCCAATGAAAAGTCAGATGGGTCACTTATCTGTAGTGATCCCACCGGATATAGTCGATTCGGCAACTGAAGGTAGTTCGGCTCAAGAAGGCGGCAGTATCAGGTTGACGTGTACGGCCACAGGGCTGCCAACTCCCGCTGTGCTGTGGCGTCGACAGAACAACAAGCCCATTGTGTTTAGGCATGACGGAGGACGAGAAAAGAAAGGTAAGCTTAACATTTGTTATTTACATTAA

Protein

MVALNPRLSVTYNNHNTWKLRVSNVQPNDSGTYMCQVNTDPMKSQMGHLSVVIPPDIVDSATEGSSAQEGGSIRLTCTATGLPTPAVLWRRQNNKPIVFRHDGGREKKGKLNICYLH

Uniprot

H9JA09   A0A2W1BK39   A0A2H1WY80   A0A2W1BJM5   A0A2A4K0W3   A0A2A4JZ35   + More
A0A212F656   A0A194RTL3   A0A194Q5K0   A0A0L7L707   A0A0L7L5G4   A0A212F663   A0A194RQ57   A0A2W1BLT9   A0A1Y1LUS4   A0A194Q104   A0A067R5S2   A0A182KN42   A0A2J7PZW6   E9ISZ1   A0A1B6HXG7   A0A1B6J7E8   A0A139WP45   K7J3Y4   A0A1B6F6R9   N6TI71   A0A182SH50   E0VQ13   A0A182YRZ5   A0A195DZY3   F4X3S8   A0A195F292   A0A182NGR2   A0A195CRF6   A0A195BGK8   A0A182MPH9   A0A182UPK0   A0A151XJQ1   A0A182WFE3   A0A182IBH9   A0A182RK29   A0A182X5U6   A0A182TKB1   E2BDH1   A0A1B0GM78   E2AYG8   A0A154PIL3   E2ACI2   A0A182PTH7   E2BBN1   B0X008   A0A088AJG9   A0A084VSN0   A0A2A3E6U9   A0A088ALP5   Q7PLL7   A0A182J2A1   A0A026W6I4   A0A2M4CNM6   A0A310SMD6   A0A1I8NN68   A0A3L8DSL2   A0A1J1IRA3   A0A1B6DI12   A0A151WP42   A0A3L8DWQ2   A0A151J7V8   A0A1I8NHV3   A0A1W4VYC1   A0A026WPA9   A0A151I737   A0A2M4BMW1   A0A182F373   W5JH43   A0A1A9Z437   A0A0R1EA03   A0A0L7QPA4   A0A1A9UYQ8   A0A1B0BQH0   A0A158N921   A0A0P8XKQ0   A0A0Q5VYL1   A0A195BVQ0   A0A182QJ96   A0A195FUG6   F4WHI3   A0A0L0BQE5   A0A154P8T4   A0A0M9A176   A0A336LZ60   A0A1B6KRU4   A0A3B0JWZ3   A0A0R3NW91   H9J2L2   B5DSY7   B4NP19   E9JAV7   B4LQZ3   A0A0Q9X6E4   A0A0M4EQU2  

Pubmed

19121390    28756777    22118469    26354079    26227816    28004739    + More
24845553    21282665    18362917    19820115    20075255    23537049    20566863    25244985    21719571    20798317    24438588    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24508170    30249741    25315136    20920257    23761445    17994087    17550304    21347285    26108605    15632085   

EMBL

BABH01009420    BABH01009421    KZ150004    PZC75248.1    ODYU01011539    SOQ57344.1    + More
PZC75249.1    NWSH01000340    PCG77282.1    PCG77281.1    AGBW02010073    OWR49222.1    KQ459896    KPJ19456.1    KQ459583    KPI98670.1    JTDY01002611    KOB71096.1    JTDY01002784    KOB70738.1    OWR49223.1    KPJ19455.1    PZC75251.1    GEZM01051704    JAV74737.1    KPI98669.1    KK852725    KDR17669.1    NEVH01020331    PNF21868.1    GL765434    EFZ16242.1    GECU01028324    JAS79382.1    GECU01012615    JAS95091.1    KQ971307    KYB29768.1    AAZX01004985    GECZ01023884    JAS45885.1    APGK01036801    KB740943    KB632399    ENN77518.1    ERL94858.1    DS235389    EEB15469.1    KQ979955    KYN18470.1    GL888624    EGI58875.1    KQ981856    KYN34501.1    KQ977394    KYN03077.1    KQ976490    KYM83356.1    AXCM01008344    AXCM01008345    AXCM01008346    KQ982074    KYQ60508.1    APCN01000703    GL447620    EFN86283.1    AJVK01011203    AJVK01011204    AJVK01011205    GL443910    EFN61503.1    KQ434924    KZC11652.1    GL438528    EFN68848.1    GL447128    EFN86908.1    DS232224    EDS37883.1    ATLV01016092    ATLV01016093    ATLV01016094    KE525057    KFB40974.1    KZ288349    PBC27420.1    BT128705    AE013599    AEG79841.1    EAA46121.5    AXCP01007149    KK107372    EZA51722.1    GGFL01002746    MBW66924.1    KQ762190    OAD56151.1    QOIP01000004    RLU23401.1    CVRI01000055    CRL01622.1    GEDC01011972    JAS25326.1    KQ982907    KYQ49465.1    QOIP01000003    RLU24663.1    KQ979640    KYN20030.1    KK107139    EZA57855.1    KQ978451    KYM93933.1    GGFJ01005254    MBW54395.1    ADMH02001539    ETN62134.1    CH892674    KRK05534.1    KQ414821    KOC60460.1    JXJN01018616    JXJN01018617    ADTU01009044    CH902628    KPU75357.1    CH954179    KQS61768.1    KQ976405    KYM91883.1    AXCN02002079    KQ981268    KYN43937.1    GL888161    EGI66337.1    JRES01001533    KNC22208.1    KQ434827    KZC07628.1    KQ435794    KOX73793.1    UFQT01000326    SSX23274.1    GEBQ01025805    JAT14172.1    OUUW01000010    SPP85593.1    CH475657    KRT05212.1    BABH01008174    EDY70933.2    CH964289    EDW86108.2    GL770679    EFZ10025.1    CH940649    EDW64532.2    CH933807    KRG03819.1    CP012523    ALC39170.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000037510    + More
UP000027135    UP000235965    UP000007266    UP000002358    UP000019118    UP000030742    UP000075901    UP000009046    UP000076408    UP000078492    UP000007755    UP000078541    UP000075884    UP000078542    UP000078540    UP000075883    UP000075903    UP000075809    UP000075920    UP000075840    UP000075900    UP000076407    UP000075902    UP000008237    UP000092462    UP000000311    UP000076502    UP000075885    UP000002320    UP000005203    UP000030765    UP000242457    UP000000803    UP000075880    UP000053097    UP000095300    UP000279307    UP000183832    UP000095301    UP000192221    UP000069272    UP000000673    UP000092445    UP000002282    UP000053825    UP000078200    UP000092460    UP000005205    UP000007801    UP000008711    UP000075886    UP000037069    UP000053105    UP000268350    UP000001819    UP000007798    UP000008792    UP000009192    UP000092553   

PRIDE

H9JA09    H9J2L2   

Pfam

PF00047   ig        + More
PF07679   I-set
PF07686   V-set
PF17906   HTH_48
PF13855   LRR_8

Interpro

IPR036179   Ig-like_dom_sf        + More
IPR007110   Ig-like_dom       
IPR013783   Ig-like_fold       
IPR013151   Immunoglobulin       
IPR003006   Ig/MHC_CS       
IPR003599   Ig_sub       
IPR013098   Ig_I-set       
IPR013106   Ig_V-set       
IPR003598   Ig_sub2       
IPR041426   Mos1_HTH       
IPR032675   LRR_dom_sf       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR001611   Leu-rich_rpt       

SUPFAM

SSF48726   SSF48726       

Gene 3D

2.60.40.10     3.80.10.10    

ProteinModelPortal

H9JA09   A0A2W1BK39   A0A2H1WY80   A0A2W1BJM5   A0A2A4K0W3   A0A2A4JZ35   + More
A0A212F656   A0A194RTL3   A0A194Q5K0   A0A0L7L707   A0A0L7L5G4   A0A212F663   A0A194RQ57   A0A2W1BLT9   A0A1Y1LUS4   A0A194Q104   A0A067R5S2   A0A182KN42   A0A2J7PZW6   E9ISZ1   A0A1B6HXG7   A0A1B6J7E8   A0A139WP45   K7J3Y4   A0A1B6F6R9   N6TI71   A0A182SH50   E0VQ13   A0A182YRZ5   A0A195DZY3   F4X3S8   A0A195F292   A0A182NGR2   A0A195CRF6   A0A195BGK8   A0A182MPH9   A0A182UPK0   A0A151XJQ1   A0A182WFE3   A0A182IBH9   A0A182RK29   A0A182X5U6   A0A182TKB1   E2BDH1   A0A1B0GM78   E2AYG8   A0A154PIL3   E2ACI2   A0A182PTH7   E2BBN1   B0X008   A0A088AJG9   A0A084VSN0   A0A2A3E6U9   A0A088ALP5   Q7PLL7   A0A182J2A1   A0A026W6I4   A0A2M4CNM6   A0A310SMD6   A0A1I8NN68   A0A3L8DSL2   A0A1J1IRA3   A0A1B6DI12   A0A151WP42   A0A3L8DWQ2   A0A151J7V8   A0A1I8NHV3   A0A1W4VYC1   A0A026WPA9   A0A151I737   A0A2M4BMW1   A0A182F373   W5JH43   A0A1A9Z437   A0A0R1EA03   A0A0L7QPA4   A0A1A9UYQ8   A0A1B0BQH0   A0A158N921   A0A0P8XKQ0   A0A0Q5VYL1   A0A195BVQ0   A0A182QJ96   A0A195FUG6   F4WHI3   A0A0L0BQE5   A0A154P8T4   A0A0M9A176   A0A336LZ60   A0A1B6KRU4   A0A3B0JWZ3   A0A0R3NW91   H9J2L2   B5DSY7   B4NP19   E9JAV7   B4LQZ3   A0A0Q9X6E4   A0A0M4EQU2  

PDB

6EFY     E-value=3.29197e-24,     Score=270

KEGG

101746954    no KO assigned | (RefSeq) lachesin-like

GO

GO:0016021   GO:0005887   GO:0005515   GO:0006508   GO:0015074   GO:0003676   GO:0004352   GO:0000287   GO:0003723   GO:0006270   GO:0042555   GO:0048384  

Length:

117

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01425

Exp number, first 60 AAs:

0

Total prob of N-in:

0.10412

outside

1  -  117

 

 

Pi

21.73355

Theta

183.809158

Tajima's D

0.512351

CLR

1.087608

CSRT

0.519874006299685

Interpretation

Uncertain