Gene

KWMTBOMO03481

Pre Gene Modal

BGIBMGA006355

Annotation

PREDICTED:_lachesin-like_[Bombyx_mori]

Location

Bomo_Chr6(-):9018199-9027556      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.355 Nuclear   Reliability : 1.221

CDS

ATGGAACAATTGGTGGAAACTTATAGAGGTGAGAGCCTCGAATTGTCCCACGTGCAAAGAAACGACATGGGAACTTATTACTGCATCGCAAGCAACGGGGTCCCGCCCACTGTCAGCCGCCGTTACCAAGTCGAAGTTCATTTTATACCACAAGTGAAAGTGACGAACCAACTGGTGGGAGCTCCGCTGGGAAGCGACGTAGAACTGCAGTGCTACATCGAAGCCTCTCCTAAAGCGATGAACTCTTGGTCTCGGGAAGACGCGTTACTTAGTGACAAACTGGCAGAGAATCCGAAGTTGCGAGTCAAAGAGGCCATTGTCAATGAATACTCATTATGGATGAATTTGACTATCAAATCGCTGGCTCTTAGTGATTATGGAACATATGTTTGCGCTTCGGTTAATGCGCTTGGGAAGATGGAGAGTCAAGTCAGCTTACACAGGTTGGAGTTGAGCATGAATGGTTTTGGAGCTGAAGAACCTATGGTGTCCGGTGCCGCATGGCAGAGAGCTAGGAGCTCGCCAACTGGAACTCGTCCCGCCGCTTCTCATGCTCAGTACCACCACCTCACGAGAGAACTTCCACCGCAAATATATGCGCTAGTGATCGCTCTACTAAGATATCTAACCTTCTAA

Protein

MEQLVETYRGESLELSHVQRNDMGTYYCIASNGVPPTVSRRYQVEVHFIPQVKVTNQLVGAPLGSDVELQCYIEASPKAMNSWSREDALLSDKLAENPKLRVKEAIVNEYSLWMNLTIKSLALSDYGTYVCASVNALGKMESQVSLHRLELSMNGFGAEEPMVSGAAWQRARSSPTGTRPAASHAQYHHLTRELPPQIYALVIALLRYLTF

Uniprot

A0A2H1X1V9   A0A2W1BJM5   A0A2A4K0W3   A0A2A4JZ35   A0A194Q5K0   A0A194RTL3   + More
A0A212F656   A0A0L7L5K7   A0A1B6GQL7   A0A3L8DWQ2   A0A026WPA9   T1HBZ5   F4X3S8   A0A195F292   A0A195DZY3   E2AYG8   A0A151XJQ1   A0A158P0L9   A0A195BGK8   A0A195CRF6   A0A2S2PAL1   E2BDH1   A0A088AJG9   A0A139WP45   A0A2A3E6U9   A0A0L7QPA4   A0A195FUG6   A0A1Y1LUS4   A0A158N921   J9K4J3   A0A151WP42   A0A026W6I4   A0A195BVQ0   A0A3L8DSL2   E0VQ13   A0A067R5S2   A0A336LZ60   K7J3Y4   A0A088ALP5   E2ACI2   A0A3B0JU01   A0A2M4CNM6   A0A0P8XKQ0   A0A182F373   A0A2M4BMW1   W5JH43   A0A182J2A1   A0A182MPH9   A0A182UPK0   A0A182IBH9   A0A182WFE3   A0A3B0JWZ3   A0A1S4GYV3   A0A182TKB1   A0A1I8NHV3   A0A1J1IRA3   A0A182RK29   B4LQZ3   A0A182X5U6   A0A182NGR2   B4NP19   A0A0L7QRK4   A0A310SMD6   A0A0R3NW91   A0A182QJ96   A0A0M9A176   A0A0L0BQE5   B5DSY7   B4GX90   A0A084VSN0   A0A0Q9X6E4   A0NFK2   A0A1S4GAQ9   A0A182W618   A0A182JAS4   H9J1R2   J9K816   A0A084VV20   A0A2S2PES2   A0A1B0GM78   W5JI68  

Pubmed

28756777    26354079    22118469    26227816    30249741    24508170    + More
21719571    20798317    21347285    18362917    19820115    28004739    20566863    24845553    20075255    17994087    20920257    23761445    12364791    25315136    15632085    26108605    24438588    19121390   

EMBL

ODYU01012820    SOQ59313.1    KZ150004    PZC75249.1    NWSH01000340    PCG77282.1    + More
PCG77281.1    KQ459583    KPI98670.1    KQ459896    KPJ19456.1    AGBW02010073    OWR49222.1    JTDY01002784    KOB70737.1    GECZ01005052    JAS64717.1    QOIP01000003    RLU24663.1    KK107139    EZA57855.1    ACPB03006633    GL888624    EGI58875.1    KQ981856    KYN34501.1    KQ979955    KYN18470.1    GL443910    EFN61503.1    KQ982074    KYQ60508.1    ADTU01005317    ADTU01005318    ADTU01005319    ADTU01005320    ADTU01005321    KQ976490    KYM83356.1    KQ977394    KYN03077.1    GGMR01013882    MBY26501.1    GL447620    EFN86283.1    KQ971307    KYB29768.1    KZ288349    PBC27420.1    KQ414821    KOC60460.1    KQ981268    KYN43937.1    GEZM01051704    JAV74737.1    ADTU01009044    ABLF02036994    ABLF02037003    KQ982907    KYQ49465.1    KK107372    EZA51722.1    KQ976405    KYM91883.1    QOIP01000004    RLU23401.1    DS235389    EEB15469.1    KK852725    KDR17669.1    UFQT01000326    SSX23274.1    AAZX01004985    GL438528    EFN68848.1    OUUW01000010    SPP85594.1    GGFL01002746    MBW66924.1    CH902628    KPU75357.1    GGFJ01005254    MBW54395.1    ADMH02001539    ETN62134.1    AXCP01007149    AXCM01008344    AXCM01008345    AXCM01008346    APCN01000703    SPP85593.1    AAAB01008944    CVRI01000055    CRL01622.1    CH940649    EDW64532.2    CH964289    EDW86108.2    KQ414775    KOC61270.1    KQ762190    OAD56151.1    CH475657    KRT05212.1    AXCN02002079    KQ435794    KOX73793.1    JRES01001533    KNC22208.1    EDY70933.2    CH479195    EDW27201.1    ATLV01016092    ATLV01016093    ATLV01016094    KE525057    KFB40974.1    CH933807    KRG03819.1    AAAB01008973    EAU76204.3    BABH01008159    ABLF02029059    ATLV01017146    KE525157    KFB41814.1    GGMR01015321    MBY27940.1    AJVK01011203    AJVK01011204    AJVK01011205    ADMH02001108    ETN64087.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    UP000279307    + More
UP000053097    UP000015103    UP000007755    UP000078541    UP000078492    UP000000311    UP000075809    UP000005205    UP000078540    UP000078542    UP000008237    UP000005203    UP000007266    UP000242457    UP000053825    UP000007819    UP000009046    UP000027135    UP000002358    UP000268350    UP000007801    UP000069272    UP000000673    UP000075880    UP000075883    UP000075903    UP000075840    UP000075920    UP000075902    UP000095301    UP000183832    UP000075900    UP000008792    UP000076407    UP000075884    UP000007798    UP000001819    UP000075886    UP000053105    UP000037069    UP000008744    UP000030765    UP000009192    UP000007062    UP000005204    UP000092462   

PRIDE

H9J1R2   

Pfam

PF07679   I-set        + More
PF00047   ig
PF17906   HTH_48

Interpro

IPR013783   Ig-like_fold        + More
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR013098   Ig_I-set       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR003006   Ig/MHC_CS       
IPR013106   Ig_V-set       
IPR013151   Immunoglobulin       
IPR041426   Mos1_HTH       
IPR013087   Znf_C2H2_type       

SUPFAM

SSF48726   SSF48726       

Gene 3D

2.60.40.10    

ProteinModelPortal

A0A2H1X1V9   A0A2W1BJM5   A0A2A4K0W3   A0A2A4JZ35   A0A194Q5K0   A0A194RTL3   + More
A0A212F656   A0A0L7L5K7   A0A1B6GQL7   A0A3L8DWQ2   A0A026WPA9   T1HBZ5   F4X3S8   A0A195F292   A0A195DZY3   E2AYG8   A0A151XJQ1   A0A158P0L9   A0A195BGK8   A0A195CRF6   A0A2S2PAL1   E2BDH1   A0A088AJG9   A0A139WP45   A0A2A3E6U9   A0A0L7QPA4   A0A195FUG6   A0A1Y1LUS4   A0A158N921   J9K4J3   A0A151WP42   A0A026W6I4   A0A195BVQ0   A0A3L8DSL2   E0VQ13   A0A067R5S2   A0A336LZ60   K7J3Y4   A0A088ALP5   E2ACI2   A0A3B0JU01   A0A2M4CNM6   A0A0P8XKQ0   A0A182F373   A0A2M4BMW1   W5JH43   A0A182J2A1   A0A182MPH9   A0A182UPK0   A0A182IBH9   A0A182WFE3   A0A3B0JWZ3   A0A1S4GYV3   A0A182TKB1   A0A1I8NHV3   A0A1J1IRA3   A0A182RK29   B4LQZ3   A0A182X5U6   A0A182NGR2   B4NP19   A0A0L7QRK4   A0A310SMD6   A0A0R3NW91   A0A182QJ96   A0A0M9A176   A0A0L0BQE5   B5DSY7   B4GX90   A0A084VSN0   A0A0Q9X6E4   A0NFK2   A0A1S4GAQ9   A0A182W618   A0A182JAS4   H9J1R2   J9K816   A0A084VV20   A0A2S2PES2   A0A1B0GM78   W5JI68  

PDB

6EFY     E-value=2.85287e-33,     Score=351

KEGG

101746954    no KO assigned | (RefSeq) lachesin-like

GO

GO:0016021   GO:0003676   GO:0005515   GO:0005524   GO:0008270   GO:0016491   GO:0004352   GO:0000287   GO:0003723   GO:0006270   GO:0042555   GO:0048384  

Length:

211

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.06362

Exp number, first 60 AAs:

0.00055

Total prob of N-in:

0.09968

outside

1  -  211

 

 

Pi

212.7958

Theta

157.021404

Tajima's D

1.036602

CLR

0.139605

CSRT

0.669966501674916

Interpretation

Uncertain