Gene

KWMTBOMO03478

Pre Gene Modal

BGIBMGA006528

Annotation

PREDICTED:_lachesin-like_[Bombyx_mori]

Location

Bomo_Chr6(+):8907227-8979080      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.057

CDS

ATGGGTCATCTTTCAGTGGTGATACCGCCAGAGATAGCCGATGAAGATGGATCGGAAGCAAGTGCTCCTGAAGGTGGGTCGGTGGAACTGCGGTGTACAGCTTCCGGGGTGCCTGAACCTAACATATCTTGGAAGCGGACCTTGGGTAGGAACATTATCCTGCGTGACAGTAATGGACAGGAACTGAAAGTGGTGGACAGCTATGTTGGTTCAACTCTTGTGCTGAAAGGCCTGCGGCGTTCGGACATGGGCACCTATCTGTGTATCGCAGCCAACGGCATTCCGCCTACAAAGAGCCGCCGCTACGAGGTCACCGTACTCTGTGAGTAA

Protein

MGHLSVVIPPEIADEDGSEASAPEGGSVELRCTASGVPEPNISWKRTLGRNIILRDSNGQELKVVDSYVGSTLVLKGLRRSDMGTYLCIAANGIPPTKSRRYEVTVLCE

Uniprot

H9JAI3   A0A2H1VT25   A0A2W1BLT9   A0A194RQ57   A0A194Q104   A0A212F663   + More
A0A2A4K0S7   A0A2W1BJM5   A0A2A4K0W3   A0A2A4JZ35   A0A194Q5K0   A0A212F656   A0A194RTL3   K7J3Y4   A0A1Y1LUS4   A0A0N0BBD3   A0A088AJG9   E2AYG8   A0A195F292   A0A3L8DWQ2   E2BDH1   F4X3S8   A0A026WPA9   A0A195DZY3   A0A067R5S2   A0A151XJQ1   A0A195BGK8   A0A195CRF6   A0A2A3E6U9   A0A088ALP5   A0A1J1IRA3   E2ACI2   A0A0L7QPA4   A0A182SH50   N6TI71   A0A0M9A176   A0A139WP45   A0A182YRZ5   A0A1B0GM78   A0A310SMD6   A0A194PUH5   A0A336LZ60   A0A182WFE3   A0A151J7V8   A0A154P8T4   A0A151I737   A0A182NGR2   K7IZ51   A0A151WP42   A0A182QJ96   A0A182UPK0   A0A1S4GAQ9   A0A212FI49   E2BBN1   A0A3Q0JKY0   A0A195BVQ0   A0A182IBH9   A0A182X5U6   A0A182RK29   A0NFK2   A0A026W6I4   A0A084VSN0   A0A182MPH9   A0A3L8DSL2   A0A182TKB1   E0VQ13   A0A158N921   A0A2H1WU64   A0A2S2Q2I9   A0A154PIL3   A0A182W618   A0A2A4K4N0   A0A0L7QRK4   A0A2H8TMT1   A0A182RVN5   A0A0L0BQE5   A0A1B0CRC5   A0A195FUG6   A0A1B0FJ66   A0A1A9Z437   B4LQZ3   A0A1B0BQH0   A0A2H1W1K5   A0A182PTH7   A0A0L0C9B6   F4WHI3   A0A2M4CNM6   A0A2A4JL61   A0A182J2A1   A0A1I8MHH7   A0A0J7L7S8   A0A2M4BMW1   A0A1B0FFM0   A0A2A4JJQ6   A0A1I8NHV3   A0A3B0JU01   A0A0Q9X6E4   A0A3B0JWZ3   A0A1I8NN68  

Pubmed

19121390    28756777    26354079    22118469    20075255    28004739    + More
20798317    30249741    21719571    24508170    24845553    23537049    18362917    19820115    25244985    12364791    24438588    20566863    21347285    26108605    17994087    25315136   

EMBL

BABH01009416    BABH01009417    ODYU01003976    SOQ43384.1    KZ150004    PZC75251.1    + More
KQ459896    KPJ19455.1    KQ459583    KPI98669.1    AGBW02010073    OWR49223.1    NWSH01000340    PCG77280.1    PZC75249.1    PCG77282.1    PCG77281.1    KPI98670.1    OWR49222.1    KPJ19456.1    AAZX01004985    GEZM01051704    JAV74737.1    KQ436131    KOX67431.1    GL443910    EFN61503.1    KQ981856    KYN34501.1    QOIP01000003    RLU24663.1    GL447620    EFN86283.1    GL888624    EGI58875.1    KK107139    EZA57855.1    KQ979955    KYN18470.1    KK852725    KDR17669.1    KQ982074    KYQ60508.1    KQ976490    KYM83356.1    KQ977394    KYN03077.1    KZ288349    PBC27420.1    CVRI01000055    CRL01622.1    GL438528    EFN68848.1    KQ414821    KOC60460.1    APGK01036801    KB740943    KB632399    ENN77518.1    ERL94858.1    KQ435794    KOX73793.1    KQ971307    KYB29768.1    AJVK01011203    AJVK01011204    AJVK01011205    KQ762190    OAD56151.1    KQ459597    KPI94790.1    UFQT01000326    SSX23274.1    KQ979640    KYN20030.1    KQ434827    KZC07628.1    KQ978451    KYM93933.1    KQ982907    KYQ49465.1    AXCN02002079    AAAB01008973    AGBW02008433    OWR53414.1    GL447128    EFN86908.1    KQ976405    KYM91883.1    APCN01000703    EAU76204.3    KK107372    EZA51722.1    ATLV01016092    ATLV01016093    ATLV01016094    KE525057    KFB40974.1    AXCM01008344    AXCM01008345    AXCM01008346    QOIP01000004    RLU23401.1    DS235389    EEB15469.1    ADTU01009044    ODYU01011088    SOQ56605.1    GGMS01002687    MBY71890.1    KQ434924    KZC11652.1    NWSH01000132    PCG79215.1    KQ414775    KOC61270.1    GFXV01003679    MBW15484.1    JRES01001533    KNC22208.1    AJWK01024595    AJWK01024596    AJWK01024597    KQ981268    KYN43937.1    CCAG010003433    CH940649    EDW64532.2    JXJN01018616    JXJN01018617    ODYU01005716    SOQ46836.1    JRES01000741    KNC28830.1    GL888161    EGI66337.1    GGFL01002746    MBW66924.1    NWSH01001156    PCG72324.1    AXCP01007149    LBMM01000345    KMR00004.1    GGFJ01005254    MBW54395.1    CCAG010008667    CCAG010008668    PCG72325.1    OUUW01000010    SPP85594.1    CH933807    KRG03819.1    SPP85593.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000218220    UP000002358    + More
UP000053105    UP000005203    UP000000311    UP000078541    UP000279307    UP000008237    UP000007755    UP000053097    UP000078492    UP000027135    UP000075809    UP000078540    UP000078542    UP000242457    UP000183832    UP000053825    UP000075901    UP000019118    UP000030742    UP000007266    UP000076408    UP000092462    UP000075920    UP000076502    UP000075884    UP000075886    UP000075903    UP000079169    UP000075840    UP000076407    UP000075900    UP000007062    UP000030765    UP000075883    UP000075902    UP000009046    UP000005205    UP000037069    UP000092461    UP000092444    UP000092445    UP000008792    UP000092460    UP000075885    UP000075880    UP000095301    UP000036403    UP000268350    UP000009192    UP000095300   

PRIDE

H9JAI3   

Pfam

PF07679   I-set        + More
PF07686   V-set
PF13855   LRR_8
PF00047   ig
PF00194   Carb_anhydrase
PF17906   HTH_48

Interpro

IPR036179   Ig-like_dom_sf        + More
IPR003598   Ig_sub2       
IPR013783   Ig-like_fold       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR013098   Ig_I-set       
IPR013106   Ig_V-set       
IPR003006   Ig/MHC_CS       
IPR032675   LRR_dom_sf       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR001611   Leu-rich_rpt       
IPR013151   Immunoglobulin       
IPR001148   CA_dom       
IPR036398   CA_dom_sf       
IPR041426   Mos1_HTH       

SUPFAM

SSF48726   SSF48726        + More
SSF51069   SSF51069       

Gene 3D

2.60.40.10     3.80.10.10     3.10.200.10    

ProteinModelPortal

H9JAI3   A0A2H1VT25   A0A2W1BLT9   A0A194RQ57   A0A194Q104   A0A212F663   + More
A0A2A4K0S7   A0A2W1BJM5   A0A2A4K0W3   A0A2A4JZ35   A0A194Q5K0   A0A212F656   A0A194RTL3   K7J3Y4   A0A1Y1LUS4   A0A0N0BBD3   A0A088AJG9   E2AYG8   A0A195F292   A0A3L8DWQ2   E2BDH1   F4X3S8   A0A026WPA9   A0A195DZY3   A0A067R5S2   A0A151XJQ1   A0A195BGK8   A0A195CRF6   A0A2A3E6U9   A0A088ALP5   A0A1J1IRA3   E2ACI2   A0A0L7QPA4   A0A182SH50   N6TI71   A0A0M9A176   A0A139WP45   A0A182YRZ5   A0A1B0GM78   A0A310SMD6   A0A194PUH5   A0A336LZ60   A0A182WFE3   A0A151J7V8   A0A154P8T4   A0A151I737   A0A182NGR2   K7IZ51   A0A151WP42   A0A182QJ96   A0A182UPK0   A0A1S4GAQ9   A0A212FI49   E2BBN1   A0A3Q0JKY0   A0A195BVQ0   A0A182IBH9   A0A182X5U6   A0A182RK29   A0NFK2   A0A026W6I4   A0A084VSN0   A0A182MPH9   A0A3L8DSL2   A0A182TKB1   E0VQ13   A0A158N921   A0A2H1WU64   A0A2S2Q2I9   A0A154PIL3   A0A182W618   A0A2A4K4N0   A0A0L7QRK4   A0A2H8TMT1   A0A182RVN5   A0A0L0BQE5   A0A1B0CRC5   A0A195FUG6   A0A1B0FJ66   A0A1A9Z437   B4LQZ3   A0A1B0BQH0   A0A2H1W1K5   A0A182PTH7   A0A0L0C9B6   F4WHI3   A0A2M4CNM6   A0A2A4JL61   A0A182J2A1   A0A1I8MHH7   A0A0J7L7S8   A0A2M4BMW1   A0A1B0FFM0   A0A2A4JJQ6   A0A1I8NHV3   A0A3B0JU01   A0A0Q9X6E4   A0A3B0JWZ3   A0A1I8NN68  

PDB

6EFY     E-value=5.93109e-21,     Score=242

KEGG

101746812    no KO assigned | (RefSeq) lachesin-like

GO

GO:0016021   GO:0005515   GO:0005524   GO:0008270   GO:0016491   GO:0004352   GO:0000287   GO:0003723   GO:0006270   GO:0042555   GO:0048384  

Length:

109

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00155

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03621

outside

1  -  109

 

 

Pi

239.15994

Theta

180.935073

Tajima's D

0.777547

CLR

0.379386

CSRT

0.599970001499925

Interpretation

Uncertain