Gene

KWMTBOMO03468

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-2_homolog_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr6(-):8696710-8698462      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.833

CDS

ATGGCATCATGGATCACATCAGTACACGGATATAGTGCGTTACCATGGATATTAGTTTTACCTGTTATGACCAGATTGCTTGGAAGGAAAATACCTTTTATTTTAGTTTGTATGAATACACTTATAGGGTACACGATGTTCTATTGCAGCAATAATGCAACGTTCGTTTTAATTAGTGAAATAATGCAAGGTTCATTGGCCGCTAGCAACATGACCGTATTAATTTTGATTGTTACCGAATATACAACCCCGAAGTACAGAGGTATTTTTATGACAGTGAAATCGACGATATTTTTCTGGGGTGTTTGGATCGCCAATGCTACAGGCACATTTTTTCATTGGAAGAAAATTGCTATTTATGCCTTAGTTTTCTCGATATATCCCTTTACTGTATTTTTCTGGCCGGAATCACCATCTTGGCTCGCTATGAAGGGAAAATTCACAGAATGCGCTGCAGCTCATCATTGGTTAAAAGGATATGGTAATGATTCGGAGAAGGAACTTAACAATTTGATAAAGGCCCAAAAAGAATACTTAAAACTACGCATGGGACGTAATAGAACAATTCGGAGCAGAATTAAAGGTTTTTTTGAAAAAATGACCACGAAAGGGTTTTATGCGCCTTTATTGCTTTCTATATGTGTTATGTCTCTCTACAATTTTTCGGGAAAATTTGTTTGTACGATGTATTCGATTGAATTAATAAAAAAGATCACAAACAGCGAGAGCACGGCTTATTTAGGAATGCTAATATTGGAAGCAGTTACAATACTAAGTATGCATTTTGGGTCTGTTCTATCCAGGTTCTTGAGAAGAAGAACTCTTTTGTTAGGATCATCTTTTTTAGGAATAATATTTTTGTTGATATTATCAATGTATTTGTATTTAATATCATTAAAGATTATAGACGAGAATAAAGTTGTCTCCATTTCTTTATTAACTATATTTTCTATGACTATCAGTTGTGGACCAATGATTTTGGCTTGTTCTGTTTATGGCGAATTAACTCCTATAAGGTTTAGGAGTTCTTCACTACCTCTCCTAGCGTTATATTCAGAGTTTTTGATGGCTTCAGTTTTAAAAATCTCTCCATATATATTCAAAGCTTTGAAATTGCACGGAGCATTTTTATTTTACGGTCTATCTGCTTCAGTGTTTGCGTTCATTCTGTATAAATTTTTGCCGGAAACAAAAGACAAAACTTTGCAGGAAATTGAAAAGTATTTTCAAGAGACATGCACAACCAAAGATTTATCTAAACAGCTAATTGTTAAATGA

Protein

MASWITSVHGYSALPWILVLPVMTRLLGRKIPFILVCMNTLIGYTMFYCSNNATFVLISEIMQGSLAASNMTVLILIVTEYTTPKYRGIFMTVKSTIFFWGVWIANATGTFFHWKKIAIYALVFSIYPFTVFFWPESPSWLAMKGKFTECAAAHHWLKGYGNDSEKELNNLIKAQKEYLKLRMGRNRTIRSRIKGFFEKMTTKGFYAPLLLSICVMSLYNFSGKFVCTMYSIELIKKITNSESTAYLGMLILEAVTILSMHFGSVLSRFLRRRTLLLGSSFLGIIFLLILSMYLYLISLKIIDENKVVSISLLTIFSMTISCGPMILACSVYGELTPIRFRSSSLPLLALYSEFLMASVLKISPYIFKALKLHGAFLFYGLSASVFAFILYKFLPETKDKTLQEIEKYFQETCTTKDLSKQLIVK

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
Belongs to the peptidase C1 family.

Uniprot

A0A2W1BJN4   A0A2H1VQR0   A0A2A4JBS9   A0A2W1BJK8   A0A2W1BLU7   A0A0L7KW08   + More
A0A2H1VQR9   A0A2W1BR72   H9JAI4   A0A2H1X3V1   A0A0L7KPS0   H9IWZ7   A0A2H1X3Y1   H9JFD5   A0A2W1BQ15   A0A0L7LW97   A0A0L7LBU2   A0A0N1IQT4   A0A2A4K3Q9   A0A212EJQ6   A0A0L7LSQ8   A0A2A4K454   A0A2H1VYW0   A0A2H1VYX5   A0A0L7KRG0   A0A212ETB8   A0A194Q2H3   A0A194R9C4   A0A0L7LC11   A0A0L7KVZ8   A0A0L7KWB8   A0A0L7LFR7   A0A0L7KJ46   A0A194QKY0   A0A2H1WK46   A0A2H1WKZ9   A0A2A4KB29   A0A2W1BF54   A0A0L7LCK3   H9JMX8   A0A0L7LBR5   A0A0N1IDG3   A0A194QJ23   A0A0L7KUI7   A0A2W1B9E8   A0A0L7KLX5   A0A2A4KA42   A0A0L7KWI6   A0A0N1I9K7   A0A2W1BN20   A0A2H1WX63   A0A212F161   A0A212FJ74   A0A194QJI7   A0A0L7LHM6   A0A2A4JJR5   A0A2A4JKJ9   A0A2H1W2F0   A0A212F9C9   A0A194QPY2   H9J017   A0A0N1IHN6   A0A2H1WVP2   A0A194QJ80   A0A2A4J655   A0A0L7LRT2   A0A0N1ICC4   A0A0N0PE20   A0A0L7LFS2   H9J539   A0A2H1V5D8   A0A0L7LIB6   H9J4W9   H9J525   A0A0N0PEE0   H9J4X0   A0A2A4JUU3   A0A0N0PAH4   H9J4S1   A0A2W1BD78   A0A2W1BMU2   A0A2A4KAY2   A0A1L8DF47   A0A1B0CWH0   A0A1L8DFA5   A0A336MDU0   A0A212FCB5   A0A2W1BG84   A0A023PNK9   A0A194QHU0   A0A1B0DPM5   A0A2A4JTG8   H9J4T7   A0A182GCQ0  

Pubmed

28756777    26227816    19121390    26354079    22118469    24730650    + More
26483478   

EMBL

KZ150004    PZC75259.1    ODYU01003864    SOQ43159.1    NWSH01001973    PCG69525.1    + More
PZC75262.1    PZC75261.1    JTDY01005057    KOB67418.1    SOQ43160.1    PZC75260.1    BABH01009421    ODYU01013263    SOQ59969.1    JTDY01007576    KOB65105.1    BABH01021167    SOQ59968.1    BABH01038306    KZ149985    PZC75704.1    JTDY01000013    KOB79431.1    JTDY01001793    KOB72864.1    LADJ01036943    KPJ21300.1    NWSH01000180    PCG78689.1    AGBW02014405    OWR41733.1    JTDY01000181    KOB78419.1    PCG78688.1    ODYU01005293    SOQ46008.1    ODYU01005292    SOQ46007.1    JTDY01006862    KOB65636.1    AGBW02012599    OWR44736.1    KQ459589    KPI97605.1    KQ460500    KPJ14232.1    JTDY01001770    KOB72935.1    JTDY01005064    KOB67408.1    KOB67410.1    JTDY01001315    KOB74225.1    JTDY01009531    KOB63358.1    KQ458671    KPJ05560.1    ODYU01009098    SOQ53272.1    ODYU01009373    SOQ53753.1    NWSH01000008    PCG80950.1    KZ150249    PZC71837.1    KOB72931.1    BABH01028994    KOB72933.1    KQ459158    KPJ03590.1    KPJ05558.1    JTDY01005517    KOB66923.1    PZC71838.1    JTDY01009224    KOB63914.1    PCG80949.1    KOB67409.1    KQ460077    KPJ17880.1    KZ150067    PZC74120.1    ODYU01011726    SOQ57638.1    AGBW02010956    OWR47467.1    AGBW02008317    OWR53759.1    KPJ05554.1    JTDY01001035    KOB75068.1    NWSH01001160    PCG72307.1    PCG72306.1    ODYU01005893    SOQ47251.1    AGBW02009614    OWR50323.1    KPJ05561.1    BABH01018801    KPJ17887.1    ODYU01011356    SOQ57052.1    KPJ05572.1    NWSH01002771    PCG67555.1    JTDY01000230    KOB78170.1    KQ458842    KPJ04898.1    KQ460126    KPJ17588.1    KOB74230.1    BABH01038877    BABH01038878    BABH01038879    BABH01038880    BABH01038881    ODYU01000544    SOQ35484.1    JTDY01001021    KOB75109.1    BABH01025733    KQ459890    KPJ19576.1    NWSH01000578    PCG75536.1    KPJ04897.1    BABH01035527    BABH01035528    BABH01035529    PZC71835.1    KZ150062    PZC74196.1    PCG80953.1    GFDF01009026    JAV05058.1    AJWK01032461    GFDF01009027    JAV05057.1    UFQT01001016    SSX28504.1    AGBW02009205    OWR51386.1    PZC71836.1    KJ439227    KZ150491    AHX25878.1    PZC70688.1    KQ458981    KPJ04505.1    AJVK01008157    NWSH01000704    PCG74682.1    BABH01035469    JXUM01009472    KQ560284    KXJ83288.1   

Proteomes

UP000218220    UP000037510    UP000005204    UP000053240    UP000007151    UP000053268    + More
UP000092461    UP000092462    UP000069940    UP000249989   

PRIDE

H9JAI4    H9IWZ7    H9JFD5    H9JMX8    H9J017    H9J539    + More
H9J4W9    H9J525    H9J4X0    H9J4S1    H9J4T7   

Pfam

PF00083   Sugar_tr        + More
PF07690   MFS_1
PF08246   Inhibitor_I29
PF00112   Peptidase_C1

Interpro

IPR005829   Sugar_transporter_CS        + More
IPR020846   MFS_dom       
IPR036259   MFS_trans_sf       
IPR005828   MFS_sugar_transport-like       
IPR011701   MFS       
IPR003663   Sugar/inositol_transpt       
IPR013201   Prot_inhib_I29       
IPR039417   Peptidase_C1A_papain-like       
IPR038765   Papain-like_cys_pep_sf       
IPR000668   Peptidase_C1A_C       
IPR000169   Pept_cys_AS       

SUPFAM

SSF103473   SSF103473        + More
SSF54001   SSF54001       

CDD

cd06174  MFS
cd02248  Peptidase_C1A

ProteinModelPortal

A0A2W1BJN4   A0A2H1VQR0   A0A2A4JBS9   A0A2W1BJK8   A0A2W1BLU7   A0A0L7KW08   + More
A0A2H1VQR9   A0A2W1BR72   H9JAI4   A0A2H1X3V1   A0A0L7KPS0   H9IWZ7   A0A2H1X3Y1   H9JFD5   A0A2W1BQ15   A0A0L7LW97   A0A0L7LBU2   A0A0N1IQT4   A0A2A4K3Q9   A0A212EJQ6   A0A0L7LSQ8   A0A2A4K454   A0A2H1VYW0   A0A2H1VYX5   A0A0L7KRG0   A0A212ETB8   A0A194Q2H3   A0A194R9C4   A0A0L7LC11   A0A0L7KVZ8   A0A0L7KWB8   A0A0L7LFR7   A0A0L7KJ46   A0A194QKY0   A0A2H1WK46   A0A2H1WKZ9   A0A2A4KB29   A0A2W1BF54   A0A0L7LCK3   H9JMX8   A0A0L7LBR5   A0A0N1IDG3   A0A194QJ23   A0A0L7KUI7   A0A2W1B9E8   A0A0L7KLX5   A0A2A4KA42   A0A0L7KWI6   A0A0N1I9K7   A0A2W1BN20   A0A2H1WX63   A0A212F161   A0A212FJ74   A0A194QJI7   A0A0L7LHM6   A0A2A4JJR5   A0A2A4JKJ9   A0A2H1W2F0   A0A212F9C9   A0A194QPY2   H9J017   A0A0N1IHN6   A0A2H1WVP2   A0A194QJ80   A0A2A4J655   A0A0L7LRT2   A0A0N1ICC4   A0A0N0PE20   A0A0L7LFS2   H9J539   A0A2H1V5D8   A0A0L7LIB6   H9J4W9   H9J525   A0A0N0PEE0   H9J4X0   A0A2A4JUU3   A0A0N0PAH4   H9J4S1   A0A2W1BD78   A0A2W1BMU2   A0A2A4KAY2   A0A1L8DF47   A0A1B0CWH0   A0A1L8DFA5   A0A336MDU0   A0A212FCB5   A0A2W1BG84   A0A023PNK9   A0A194QHU0   A0A1B0DPM5   A0A2A4JTG8   H9J4T7   A0A182GCQ0  

PDB

4LDS     E-value=4.59098e-09,     Score=146

KEGG

105842261    no KO assigned | (RefSeq) facilitated trehalose transporter Tret1-2 homolog

GO

GO:0016021   GO:0022857   GO:0008643   GO:0008234   GO:0016491   GO:0004352   GO:0000287   GO:0003723   GO:0006270   GO:0042555   GO:0048384   GO:0055085  

Length:

425

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

218.54079

Exp number, first 60 AAs:

39.4907

Total prob of N-in:

0.50249

POSSIBLE N-term signal

sequence

inside

1  -  4

TMhelix

5  -  27

outside

28  -  30

TMhelix

31  -  48

inside

49  -  54

TMhelix

55  -  77

outside

78  -  86

TMhelix

87  -  104

inside

105  -  116

TMhelix

117  -  134

outside

135  -  203

TMhelix

204  -  223

inside

224  -  242

TMhelix

243  -  265

outside

266  -  274

TMhelix

275  -  297

inside

298  -  309

TMhelix

310  -  332

outside

333  -  371

TMhelix

372  -  394

inside

395  -  425

 

 

Pi

169.822099

Theta

32.08682

Tajima's D

1.781774

CLR

0.165267

CSRT

0.848007599620019

Interpretation

Uncertain