Gene

KWMTBOMO03466

Pre Gene Modal

BGIBMGA006522

Annotation

PREDICTED:_lachesin-like_[Bombyx_mori]

Location

Bomo_Chr6(+):8570553-8601391      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.494

CDS

ATGAAGAGTCAGACAGCTTATTTAGATGTTGTAGTTCCGCCGGACATCTTAGACTACCCGACAAGCAGCGACCAAGTGGCCAGAGAAGGCGCCAACGTAACTCTGCGGTGTGCCGCCCACGGGGTACCGACTCCGATAGTTGTATGGAGAAAAGAGGCTGGGGACTTGTTACCTACAAGTAATTTTAGTGATACACACAATAGTTCAGTAAGCGGTGCAGTATTGCAATTAACGAAAGTATCAAGGTTACACATGGGAGCGTACCTGTGCATCGCCAGCAATGGTGTTCCGCCCTCAGTTAGCAAACGAGTTATGCTTGTAGTGCACTTTCCGCCTATAATGACTATACAAAACCAATTAGTTGGAGCGAAAGAAAGTGACACAGTACATTTAGATTGTCATTCCGAGGCTTTCCCAAGGTCTATTAATTATTGGACTATAAACGATCAAATTATTTCACAGTCTGATAAAAGATTCGAAATATCAGCAATAGAGAGAGGCTACGAAGTAGATATGAGGCTTACTATCAAGAAAGTAGGCAGAACCACATTCGGTACATACAGTTGTATATCGAAGAACTCGCTCGGCGATACCGACGGAACCATAAAATTGTATTCACTGTCCGGCAAGTTCGAAGAGATGCAGTACAACGAGGTAGGGGATTTCGAAGACGCCTCGGACGTGAGTGAACTGGAAGCTTTGAAGCGAAGTGGGGCAACTCGATTACATAAAACTATACTATTCTTAGCTATATACTTTGTATCATAA

Protein

MKSQTAYLDVVVPPDILDYPTSSDQVAREGANVTLRCAAHGVPTPIVVWRKEAGDLLPTSNFSDTHNSSVSGAVLQLTKVSRLHMGAYLCIASNGVPPSVSKRVMLVVHFPPIMTIQNQLVGAKESDTVHLDCHSEAFPRSINYWTINDQIISQSDKRFEISAIERGYEVDMRLTIKKVGRTTFGTYSCISKNSLGDTDGTIKLYSLSGKFEEMQYNEVGDFEDASDVSELEALKRSGATRLHKTILFLAIYFVS

Uniprot

A0A2H1W6U1   A0A212FH85   A0A2A4IVY7   A0A2W1BU46   H9JAH7   A0A0L7L714   + More
A0A194RPL1   A0A194PXI8   A0A3Q0IW20   A0A1Y1LNF8   A0A1B6D2N4   A0A1B6HUZ7   A0A336KEB9   A0A182PSA1   A0A1J1I5L4   A0A1B0G530   A0A182R6W3   A0A182VSY0   A0A0L7R3L1   A0A182N8R0   A0A1B6IVY8   A0A1A9W2W7   A0A0Q9WKY2   A0A139WM62   A0A084WD23   A0A195CGL5   Q5TNT9   A0A0A9VWP6   A0A182FMV4   A0A1B0A3T4   A0A151WX97   A0A1S4H3E1   A0A182YHC8   A0A0Q9XGG8   A0A0Q9XDV3   A0A0Q9XHX3   A0A0Q9XEG5   A0A0Q9X4T6   A0A195F966   B4Q410   Q4V5E0   W8BS30   A0A1Y1KSH7   B4MV41   B3N4Y8   B4KGJ7   A0A232FAW1   A0A0Q9WIX4   A0A0Q9XHL3   A0A182QF62   B4LRI0   B4P041   A0A1W4VAU1   Q9VMN6   B5DJP7   A0A3B0JVB8   B4GT22   B4I1I8   A0A0J9QW98   D6W8U0   E0VDX7   A0A1B6C3X8   A0A1B0DRB0   A0A0M4E9D1   A0A1I8NTJ4   K7IU08   A0A1I8NTJ3   Q175Z6   B3MME1   A0A0L0BZ87   A0A139WMQ5   A0A2J7QVB7   B4JC54   A0A151JMC5   A0A2J7Q438   A0A158N9S9   A0A0N0U5K1   A0A026VU85   A0A151I3V4   A0A3L8D340   B0WPE3   A0A0A9YR40   A0A146LEP4   A0A067R549   A0A182G7V5   A0A154PDG7   E2B7M9   A0A0L7QWG9   A0A2S2NSZ8   A0A1A9XRJ5   A0A088A7M9   A0A232FJS2   A0A182X3C5   Q175Z4   A0A3L8D334   A0A2H8TXR5   A0A182I0R5   A0A182YHD0   A0A182KJT0   A0A1S4H456  

Pubmed

22118469    28756777    19121390    26227816    26354079    28004739    + More
17994087    18362917    19820115    24438588    12364791    25401762    25244985    24495485    28648823    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    30467080    15632085    23185243    22936249    20566863    20075255    17510324    18057021    26108605    21347285    24508170    30249741    26823975    24845553    26483478    20798317    20966253   

EMBL

ODYU01006708    SOQ48801.1    AGBW02008524    OWR53090.1    NWSH01006584    PCG63352.1    + More
KZ150004    PZC75263.1    BABH01009369    BABH01009370    BABH01009371    BABH01009372    JTDY01002580    KOB71160.1    KQ459896    KPJ19447.1    KQ459589    KPI97474.1    GEZM01053974    JAV73890.1    GEDC01017473    JAS19825.1    GECU01029220    JAS78486.1    UFQS01000363    UFQT01000363    SSX03174.1    SSX23540.1    CVRI01000038    CRK94222.1    CCAG010000390    CCAG010000391    KQ414663    KOC65423.1    GECU01016696    JAS91010.1    CH940649    KRF81173.1    KQ971312    KYB29128.1    ATLV01022922    ATLV01022923    KE525338    KFB48117.1    KQ977791    KYM99870.1    AAAB01008980    EAL39301.3    GBHO01042982    JAG00622.1    KQ982668    KYQ52468.1    CH933807    KRG03143.1    KRG03140.1    KRG03139.1    KRG03138.1    KRG03142.1    KQ981727    KYN36752.1    CM000361    EDX03843.1    BT022716    AAY55132.1    GAMC01010479    JAB96076.1    GEZM01074983    JAV64359.1    CH963857    EDW76386.2    CH954177    EDV57890.2    EDW12193.2    NNAY01000578    OXU27578.1    KRF81172.1    KRG03144.1    AXCN02001860    AXCN02001861    EDW63575.2    CM000157    EDW88906.2    AE014134    BT150446    AAF52276.2    AHZ64220.1    CH379061    EDY70519.2    KRT04768.1    OUUW01000010    SPP86024.1    CH479189    EDW25531.1    CH480820    EDW54395.1    CM002910    KMY88336.1    KMY88337.1    KMY88338.1    KMY88339.1    KMY88340.1    KMY88341.1    KMY88342.1    EEZ98398.2    DS235088    EEB11583.1    GEDC01029358    JAS07940.1    AJVK01009012    AJVK01009013    AJVK01009014    CP012523    ALC38788.1    CH477392    EAT41936.1    CH902620    EDV31901.1    KPU73692.1    JRES01001211    KNC24549.1    KYB29127.1    NEVH01010477    PNF32524.1    CH916368    EDW03067.1    KQ978968    KYN26875.1    NEVH01018390    PNF23362.1    ADTU01009347    ADTU01009348    ADTU01009349    ADTU01009350    ADTU01009351    ADTU01009352    ADTU01009353    ADTU01009354    ADTU01009355    ADTU01009356    KQ435789    KOX74421.1    KK107894    EZA47297.1    KQ976484    KYM83675.1    QOIP01000014    RLU14912.1    DS232023    EDS32322.1    GBHO01011604    JAG32000.1    GDHC01013152    JAQ05477.1    KK852746    KDR17303.1    JXUM01008726    JXUM01008727    JXUM01008728    JXUM01008729    KQ560267    KXJ83449.1    KQ434869    KZC09434.1    GL446193    EFN88307.1    KQ414714    KOC62911.1    GGMR01007660    MBY20279.1    NNAY01000119    OXU30790.1    EAT41938.1    RLU14915.1    GFXV01006153    MBW17958.1    APCN01005239   

Proteomes

UP000007151    UP000218220    UP000005204    UP000037510    UP000053240    UP000053268    + More
UP000079169    UP000075885    UP000183832    UP000092444    UP000075900    UP000075920    UP000053825    UP000075884    UP000091820    UP000008792    UP000007266    UP000030765    UP000078542    UP000007062    UP000069272    UP000092445    UP000075809    UP000076408    UP000009192    UP000078541    UP000000304    UP000007798    UP000008711    UP000215335    UP000075886    UP000002282    UP000192221    UP000000803    UP000001819    UP000268350    UP000008744    UP000001292    UP000009046    UP000092462    UP000092553    UP000095300    UP000002358    UP000008820    UP000007801    UP000037069    UP000235965    UP000001070    UP000078492    UP000005205    UP000053105    UP000053097    UP000078540    UP000279307    UP000002320    UP000027135    UP000069940    UP000249989    UP000076502    UP000008237    UP000092443    UP000005203    UP000076407    UP000075840    UP000075882   

PRIDE

H9JAH7    Q4V5E0    Q9VMN6   

Pfam

PF07679   I-set        + More
PF03564   DUF1759
PF12259   Baculo_F
PF07686   V-set

Interpro

IPR013783   Ig-like_fold        + More
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR013098   Ig_I-set       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR005312   DUF1759       
IPR022048   Envelope_fusion-like       
IPR013106   Ig_V-set       

SUPFAM

SSF48726   SSF48726       

Gene 3D

2.60.40.10    

ProteinModelPortal

A0A2H1W6U1   A0A212FH85   A0A2A4IVY7   A0A2W1BU46   H9JAH7   A0A0L7L714   + More
A0A194RPL1   A0A194PXI8   A0A3Q0IW20   A0A1Y1LNF8   A0A1B6D2N4   A0A1B6HUZ7   A0A336KEB9   A0A182PSA1   A0A1J1I5L4   A0A1B0G530   A0A182R6W3   A0A182VSY0   A0A0L7R3L1   A0A182N8R0   A0A1B6IVY8   A0A1A9W2W7   A0A0Q9WKY2   A0A139WM62   A0A084WD23   A0A195CGL5   Q5TNT9   A0A0A9VWP6   A0A182FMV4   A0A1B0A3T4   A0A151WX97   A0A1S4H3E1   A0A182YHC8   A0A0Q9XGG8   A0A0Q9XDV3   A0A0Q9XHX3   A0A0Q9XEG5   A0A0Q9X4T6   A0A195F966   B4Q410   Q4V5E0   W8BS30   A0A1Y1KSH7   B4MV41   B3N4Y8   B4KGJ7   A0A232FAW1   A0A0Q9WIX4   A0A0Q9XHL3   A0A182QF62   B4LRI0   B4P041   A0A1W4VAU1   Q9VMN6   B5DJP7   A0A3B0JVB8   B4GT22   B4I1I8   A0A0J9QW98   D6W8U0   E0VDX7   A0A1B6C3X8   A0A1B0DRB0   A0A0M4E9D1   A0A1I8NTJ4   K7IU08   A0A1I8NTJ3   Q175Z6   B3MME1   A0A0L0BZ87   A0A139WMQ5   A0A2J7QVB7   B4JC54   A0A151JMC5   A0A2J7Q438   A0A158N9S9   A0A0N0U5K1   A0A026VU85   A0A151I3V4   A0A3L8D340   B0WPE3   A0A0A9YR40   A0A146LEP4   A0A067R549   A0A182G7V5   A0A154PDG7   E2B7M9   A0A0L7QWG9   A0A2S2NSZ8   A0A1A9XRJ5   A0A088A7M9   A0A232FJS2   A0A182X3C5   Q175Z4   A0A3L8D334   A0A2H8TXR5   A0A182I0R5   A0A182YHD0   A0A182KJT0   A0A1S4H456  

PDB

6EG1     E-value=8.70415e-72,     Score=685

KEGG

101745834    no KO assigned | (RefSeq) lachesin-like

GO

GO:0016021   GO:0050808   GO:0005887   GO:0005515   GO:0007186   GO:0016491   GO:0004352   GO:0000287   GO:0003723   GO:0006270   GO:0042555   GO:0048384  

Length:

255

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04851

Exp number, first 60 AAs:

0.00148

Total prob of N-in:

0.08993

outside

1  -  255

 

 

Pi

2.551106

Theta

170.603091

Tajima's D

0

CLR

0.521416

CSRT

0.367081645917704

Interpretation

Uncertain