SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03463  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006360
Annotation
hypothetical_protein_KGM_13117_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 2.551
 

Sequence

CDS
ATGGCCAACCGCTTGTGCTTGGCCACTAATACGTCACAAATTACTTTAAAGGAAGATTACGTAGCCGAAATTAATAAGGAACAGACCTTGGACAATGTGTGTTCAGAAGCGAAAAACTGGGTCCTATCAAAATTTACTGACTATAAACTTTACTCAAGTAAAATTCTACAAGTTGGATGCTCTGATGTTTGTGGTGTCGACGTTTGGACTAATTTAGATGTTAACTTTTATTGTAAATTTTACAAATGGGGTGACGAATTATTGAAAACTCAACCACATGTTGTGGCCAATTCAGGCCATGAGAGCATAATTAAGACCATATCTGAGCCAAAACAAAATGACTCACTTGATATCATTGTCAGTGCAGGAACTAATGAAAAACCTAAAGACAAAGCTATTCAGTCACCAGAAGGTTCATCCAGTCCAATTAATGCTAGTTCAAAATTACCACCAGTAAATGAGCAAGAAACCCTTAAGCAAGCTAAGTCAAATCAAGACCAGGAACTAAAAAGTGATGTACTACCTGAATTAAAACCCAATGTGCCTCAGAATGTAATACCAAATGCATCATCTGATAAACAACCTCAAGTTGTCAAACAGGTTCCATTTATTGCTCCAGTTGCTGAGAAAATCGAGAAACATGAAGAACCAAAATCAAACAGTGTAATTGAAAATCCAAATATCAACCCCCAAGAAGATATTGATGACTACCCAGGAAATGATGATTCTGAGATTCCCAAAAATGATCCTGATGCTGCTGATGAAGACAATGTGGAGGATCCAGGTTTTGAGGATGATAAACAACAAAAGGAGAAAAAGGATGATAAGATTAATGCAAAGGTAGTGCCGGTTATATCAAATCCTAACGATCCTCCGCAAAAAGCATCTAAAGAAGAAAATGAACAGTTTGAAGAGAATAAACAGGACAATATTAAAGTTGAACCAGCAATGCCATCATTTAGAGAAGTAAAACATACAGAGTTCTACCCGAGCACTATCCAAGATGGATATCCGGATGACGATCACTTCTTCACGTTTTTCCTGACCGCTGTTATTTTGGTTGTAGTCATTTACGTATTGTATTACAACAAGAGCAGAGTTGGAAAATTGGTTCTCGGTCTGATCGTCGAAGGACGTCAAGGTAGAAGGAGAAACAGCAGAGGTCATGCTTATCGTCGCTTAGATACATTAGAACAAGCTATGAGTTCCAATACTACAGCACCACCGAGCAAAATCATATACTAA
Protein
MANRLCLATNTSQITLKEDYVAEINKEQTLDNVCSEAKNWVLSKFTDYKLYSSKILQVGCSDVCGVDVWTNLDVNFYCKFYKWGDELLKTQPHVVANSGHESIIKTISEPKQNDSLDIIVSAGTNEKPKDKAIQSPEGSSSPINASSKLPPVNEQETLKQAKSNQDQELKSDVLPELKPNVPQNVIPNASSDKQPQVVKQVPFIAPVAEKIEKHEEPKSNSVIENPNINPQEDIDDYPGNDDSEIPKNDPDAADEDNVEDPGFEDDKQQKEKKDDKINAKVVPVISNPNDPPQKASKEENEQFEENKQDNIKVEPAMPSFREVKHTEFYPSTIQDGYPDDDHFFTFFLTAVILVVVIYVLYYNKSRVGKLVLGLIVEGRQGRRRNSRGHAYRRLDTLEQAMSSNTTAPPSKIIY

Summary

Interpro
IPR037645   KCT2       

Ontologies

Topology

Length:
414
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
19.79025
Exp number, first 60 AAs:
0.00114
Total prob of N-in:
0.04471
outside
1  -  342
TMhelix
343  -  362
inside
363  -  414
 
 

Population Genetic Test Statistics

Pi
127.16496
Theta
137.861258
Tajima's D
-0.520479
CLR
0.224322
CSRT
0.236338183090845
Interpretation
Uncertain
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