SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03462
Pre Gene Modal
BGIBMGA003541
Annotation
hypothetical_protein_ALC57_15604_[Trachymyrmex_cornetzi]
Location
Bomo_Chr6(+):8486013-8491229      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 2.546
 

Sequence

CDS
ATGTCAGAATATTGTTTTATTTGTACTCATCTTTTAACTGAAAGTGAAACTGTAACTGTTGATCGTGGTATGAAGACACTGATTAATGCAAGTGCTGAAAGAGATGATGGATACTCGGAATTTCTTAAAAAACAAAAATCTGTGACAATACATAGCAACTGTCGTAAAATTTATACGCGGAAGTGTTCTATTGCTGCTGCCATCAAAAGAAAACGCGAAGAACAAGAAGCTAACACATCTACAGGATCTACAGTAAGTAGTCCTCCTCGTACTAGATCCCGTTCAAGTGATTCAGCTTTTTGTTTTAAAAAACTATGTTTATTTTGTGGCAATAAATTGAATGAAGAGTTGCAGAGAAAAAAATCCTTAGATCGTCGCAGTAAAATTTGTCAAGTAAGTACACTCCAATTCAAACATTCAATTTTGGAAGTAGCACGAACTCGTTCCGATGCTATATCGAAAGCTGTTGTTGCTCGAATCGAATTTGACTATGATTTAGTTGCTGCTGAAGCAAAGTATCACCAAGAATGTTATACTTCTTTTTTGAAACCGACTACTGGCGGTACAGTTGGTCGTCCTAAAGATGAAGCAACAGATCTGGCAATGCAGGAAATATTTACATACATTGAGAGTAGCAATGACTGTCAGTTTACTTTGGCTGAGTTAAAAGATGTTAGCAAAATTTTAACTTTAGATAACAGGACTATTAAGCTGCGACTTAAACTGAAATATGGCGATAAAATTATTATCACTGAAAAACCGGGAGCGTTAACATTTGTATGTTTGATAAACAGTCACCATGAAATTTTAAATCAATCTTGGTCCGAAAATAAAAAAATTAATAAACAAGAAGAACGATTAAAAACTCTAGAAGCAGCAGCATCTATTATTCGAGAAGATATTCAATCCTCGGTATTTGATAATTCCTACTACCCTCCACCAGGTCGAATGTTTGAAGATTTAAATAATGACATCCCACAGTCACTGACATTTTTTTTGGAGCAAATGATCTTAAAAAATAAACGATCAAATTTCGATCATTTAAAACTAGTATGCACCAATATTTGTCATAGTATCATGACTGCTATTCGACCAAGATCGTTCAAGTCCAAATTACAGTTAGGTCTTTCAGTTTTTTTTCATCGGAGGTTCGGGTCTAAGCGTCTTATACAAATTTTGTCGTCTTTTGGTTTGTGTGCTTCTTATAATGATACATTGATGTACGAGTCAGCAGCAGTTTTTCATCCTCTTCCTCATGTCCTACCACCTGAAAGTGGCACACTTATTCAATACGTTGCAGATAATGCTGATATAAATGTTAATACGCTAGATGGTAACAATTCACTCCACATAATGGGTATAATTCAAATTGTAACTCCAAAGCACTCTGTTTTACTAGAAGAACCTATGCAACGAATAAAAGAAGTTCTTTCAGCAAAACACTTCAAAGCAAAAGCTCATGTGCCAATACAGATCTATCAGAATAGTGATGTAGTTGGTTACAGTAAAATATATGTCCAAGATTTTGGATATGGAACTGAAACAGTATCTTTTCATAAAAATTCTGATGTAGTATGGTTTTATGGAAAGTGGAAAAATACATCATTACCTGGTTGGAACGGTTTTATTGAGCGCTTAACAAATTACCATACAAATTATTCAAAATCTCAGATTACATTTTTACCATTCATCCATCAACCAGCTAGTAACTATAATACTGTCTATACGACTTTACTTTGTGCATTAGAGAACGCGAAACGTTACGGCCACACTGTATGCATCGTGACTTTCGACCAACCCTTGTATGCGAAAGCTCGAGAAATTGTATCAGCCGCACCTGACGGCTCTGAAGTATCGAAGATTATTGTCAGACTTGGAGGATTTCATCTACTCATGTCTTATCTCGGAGCAATTGGTTATATTATGCAAGGTAGCGGGATAAAAGAAGTACTCTCAGAAATCTATGCACCAAAGTCATTAGAAAAAATGCTCAATGGTCATGCTTACGCAAGAGCTGTTCGAGCACATACACTACTCCAGCTGGCTTTAGCAATTACAATATTAAAAACAATAGATATTAATGATATCATGGGAGCAGATTTAATCATAAATATTGACCATATATTAGATAGCACTCTTTCATATTCAGATATTGAAAATGATAATGAAGTATCAGGTGCTTTACTTCATAAATTTAATATGAAATTGAAAGATTTTGAGGAACGAGGACCAACAGCGCAACTTTGGATACAATATTTTAATATGGTTTCACTTGCAAAAGAATTTTTGAGAGCTGAGCGTATGGGGGACTGGAAAGCTCATTTAAGTTGTGTAAAAGAAATGTTACCTTATTTCCACTCGTCAGGACATTTTCCATATGCTAAATCTGCACACTTGTATTTACAAGACATGATGCAATTACAGGACTCGATGGATCCTGAAGTTTACGAAAAATTTACCGAAGGATTTTTCACCGTGAGACGCTCAGATAAATTGAGTTGTGGAACTTCTACAGACATGGTTATCGAACAGTCTATGATGAAAGCCATGAAGACAGATGGAGGTATTGCTCGAGGAAGAAGTACAAAACAAAGTGTAATCAGTAAATGGGTTTACAGCATGCATGCAATGAACACAGTTTGTGAGAAATTAGAAGATCTTGCTAATGTTAGGATGGATACGACTGAACAGCATGTTGATGCCAGTGATTCACGTGTAAAAAAAGACGCTAAAGACATACGAATGCTTCTTGAGTGGTTCTCGATTCATGATCCTTTCCCAGAGGTTAACAAAGTCATCTCGATTGCAAGTGGTGTCGTTGGTGATAATACAATTAATTGCTATAAAGCACGTGAACTTGGGCTTATCTCTATTGCTAAAATAACTGGACTGACATTTAAAGATATTAAACTTAAACGCGCTGACAAAGTTGTTCCTCTTTTAGCTATGAGTAGCACCGTAAAAGTTCACGAAGAAAAAGTACCTGTTGACCCAGTGTTATTATTCCAACGTATGAGTGTTACTGCGGCTTTTCAAGATGAAATTGAGAAATATTTCGAGTATGAATTAGCTCCTTATCCGTTAACATTATTTGATGACATTGGAATGCGCAAGACCCAGAAGTCGGCTATTTACGATTGTTTTCAGATTATAAATGTTGATATTAATAACACTAATTCAACGTACATAATTGACGGAGGATTCTTATTACATCGAGTGGTGTGGGATAGCGAGGAAACATTTAACGTTATCTTAGATAAATACGTTCAATATGTACGTCGACATTTTGGTTCCAGAGTTACTGTCGTATTTGACGGATATGATGATTATACGAGAAATATTAAAGCAGCAGAGCAACGCCGTCGAAATGCTGCTTCATCAACTTCTTCTGATATTATATTCGATGAATCAATGACAGTTCCTACCAGTCAACAGAAATTCTTTGCAAATAATCACAATAAATCTAGGTTTATTTCGATGTTGAAAGCAAAATTTACTGCTGAGAATATATCCGTTGAACAAGCTAATGATGATGCTGATGTATTGATTATTGAAACAGCGATAAAGAAATTCAGTGTGACAAATACAACTGTTGTTGTTGAACAAGAAGAAGAAGAAGAACAAGAGGATGAACAGGAAGAAGAAGGAGAAGAAGATCAAGAAGAAGAAGAAACAGAAATCTTGGACAGTTATGAATCAGACGACTAA
Protein
MSEYCFICTHLLTESETVTVDRGMKTLINASAERDDGYSEFLKKQKSVTIHSNCRKIYTRKCSIAAAIKRKREEQEANTSTGSTVSSPPRTRSRSSDSAFCFKKLCLFCGNKLNEELQRKKSLDRRSKICQVSTLQFKHSILEVARTRSDAISKAVVARIEFDYDLVAAEAKYHQECYTSFLKPTTGGTVGRPKDEATDLAMQEIFTYIESSNDCQFTLAELKDVSKILTLDNRTIKLRLKLKYGDKIIITEKPGALTFVCLINSHHEILNQSWSENKKINKQEERLKTLEAAASIIREDIQSSVFDNSYYPPPGRMFEDLNNDIPQSLTFFLEQMILKNKRSNFDHLKLVCTNICHSIMTAIRPRSFKSKLQLGLSVFFHRRFGSKRLIQILSSFGLCASYNDTLMYESAAVFHPLPHVLPPESGTLIQYVADNADINVNTLDGNNSLHIMGIIQIVTPKHSVLLEEPMQRIKEVLSAKHFKAKAHVPIQIYQNSDVVGYSKIYVQDFGYGTETVSFHKNSDVVWFYGKWKNTSLPGWNGFIERLTNYHTNYSKSQITFLPFIHQPASNYNTVYTTLLCALENAKRYGHTVCIVTFDQPLYAKAREIVSAAPDGSEVSKIIVRLGGFHLLMSYLGAIGYIMQGSGIKEVLSEIYAPKSLEKMLNGHAYARAVRAHTLLQLALAITILKTIDINDIMGADLIINIDHILDSTLSYSDIENDNEVSGALLHKFNMKLKDFEERGPTAQLWIQYFNMVSLAKEFLRAERMGDWKAHLSCVKEMLPYFHSSGHFPYAKSAHLYLQDMMQLQDSMDPEVYEKFTEGFFTVRRSDKLSCGTSTDMVIEQSMMKAMKTDGGIARGRSTKQSVISKWVYSMHAMNTVCEKLEDLANVRMDTTEQHVDASDSRVKKDAKDIRMLLEWFSIHDPFPEVNKVISIASGVVGDNTINCYKARELGLISIAKITGLTFKDIKLKRADKVVPLLAMSSTVKVHEEKVPVDPVLLFQRMSVTAAFQDEIEKYFEYELAPYPLTLFDDIGMRKTQKSAIYDCFQIINVDINNTNSTYIIDGGFLLHRVVWDSEETFNVILDKYVQYVRRHFGSRVTVVFDGYDDYTRNIKAAEQRRRNAASSTSSDIIFDESMTVPTSQQKFFANNHNKSRFISMLKAKFTAENISVEQANDDADVLIIETAIKKFSVTNTTVVVEQEEEEEQEDEQEEEGEEDQEEEETEILDSYESDD

Summary

Uniprot
A0A2W1BPI5   X1X1J6   J9LTA3   A0A151IWX4   J9M949   J9L6M0   + More
X1XDC3   A0A151IK25   A0A0J7K682   A0A151IGP6   A0A1Y1M3P7   A0A1Y1M690   A0A151IC05   A0A0J7KIX3   A0A151I871   K7JMW2   R7VAQ1  
Pubmed
28756777    28004739    20075255    23254933   
EMBL
KZ150005    PZC75227.1    ABLF02010084    ABLF02055271    ABLF02039717    KQ980849    + More
KYN12207.1    ABLF02017750    ABLF02055655    ABLF02009905    KQ977296    KYN03875.1    LBMM01013223    KMQ85754.1    KQ977686    KYN00587.1    GEZM01041913    JAV80101.1    GEZM01041914    JAV80100.1    KQ978073    KYM97251.1    LBMM01006710    KMQ90383.1    KQ978388    KYM94341.1    AAZX01023372    AMQN01005323    KB295685    ELU12775.1   
Proteomes
UP000007819    UP000078492    UP000078542    UP000036403    UP000002358    UP000014760    + More
Pfam
PF03564   DUF1759        + More
PF05585   DUF1758
Interpro
IPR005312   DUF1759        + More
IPR029060   PIN-like_dom_sf       
IPR008737   Peptidase_asp_put       
IPR007527   Znf_SWIM       
IPR036691   Endo/exonu/phosph_ase_sf       
SUPFAM
SSF88723   SSF88723        + More
SSF56219   SSF56219       
Gene 3D
3.60.10.10    
ProteinModelPortal
A0A2W1BPI5   X1X1J6   J9LTA3   A0A151IWX4   J9M949   J9L6M0   + More
X1XDC3   A0A151IK25   A0A0J7K682   A0A151IGP6   A0A1Y1M3P7   A0A1Y1M690   A0A151IC05   A0A0J7KIX3   A0A151I871   K7JMW2   R7VAQ1  

Ontologies

KEGG
101746031    no KO assigned | (RefSeq) uncharacterized LOC101746031
GO
GO:0008270  

Topology

Length:
1235
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.12497
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00088
outside
1  -  1235
 
 

Population Genetic Test Statistics

Pi
204.367892
Theta
145.626597
Tajima's D
-0.976425
CLR
13.125603
CSRT
0.143542822858857
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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