SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03458
Pre Gene Modal
BGIBMGA006361
Annotation
neuropeptide_receptor_A33_[Bombyx_mori]
Full name
Tachykinin-like peptides receptor 86C      
Location in the cell
PlasmaMembrane   Reliability : 4.869
 

Sequence

CDS
ATGAGGACCGTAACGAATTGTTTCCTTGTGAACCTGGCCGTAGCAGACCTCTTAATGGCAACCCTCAACGGAGCTCCGAACTTCGTATTCCTGGTGACGGCTAACTGGCCCTTTGGAGCCGTGACATGCACTGCGAGTAACTTCACAGCAAGCCTGACCGTGTCAGCGGGCGTATTCACGCTCGTGGCCATAACAGTTGACAGATATGTCGCCATAGTGAAGCCATTGCAACACAGGCTAAGTCGGCGAGTGGTCCGCGCTGCCTTGTTCACGGTTTGGATCGCCAGCGCCATGCTAGCCTTACCCAGTCTGCTCTACTCCGATACCTACAAAAAACAGTATGTAAATGGAGAACGAGAGATTTGCTTCATCAAATGGCCCGACGGTAGCTACCCAACATCTTTAAGTGATTACTGCTACAACCTGGTGTTCCTGTCGGTAACGTACGTATTACCAATGGCGGTAATGGTGTGGGCTTACGCACAAATGAGCGCTGCCCTCACAGGGAGGGCCATTGGAGAATGCACACTGCACCAGATGCAAGTCGTCAGGGCTAAACGGAAGGTGGTGAGAATGTTCGTGCTGGTCGTGATGGTGTTTGCTCTATGCTGGCTTCCATACCACGCGTATTTCGTTCTGGTGTATCACCATCAGTCACTCGCCACGGCGCCTTTCGCTCAGCACATCTATCTCGGCTTCTACTGGCTGGCGATGGCAAACTCTATGTTTAATCCTCTCATCTACTATTGGATGAGCAATAAATTCAGACTTTACTTCCGCCTAGTTTTATGCTGGTGTTGGAAATCAGAATCGGCGACCCCAAATGATTTGAAAAAGCTCGAGGTTAAATCTTATTCTGTAAGCCAAAGGCACTTTCGTGACGTATCTTCGTTCAGCCGAGCATGA
Protein
MRTVTNCFLVNLAVADLLMATLNGAPNFVFLVTANWPFGAVTCTASNFTASLTVSAGVFTLVAITVDRYVAIVKPLQHRLSRRVVRAALFTVWIASAMLALPSLLYSDTYKKQYVNGEREICFIKWPDGSYPTSLSDYCYNLVFLSVTYVLPMAVMVWAYAQMSAALTGRAIGECTLHQMQVVRAKRKVVRMFVLVVMVFALCWLPYHAYFVLVYHHQSLATAPFAQHIYLGFYWLAMANSMFNPLIYYWMSNKFRLYFRLVLCWCWKSESATPNDLKKLEVKSYSVSQRHFRDVSSFSRA

Summary

Description
Receptor for tachykinin-like peptides.
Similarity
Belongs to the G-protein coupled receptor 1 family.
Keywords
Cell membrane   Complete proteome   G-protein coupled receptor   Glycoprotein   Membrane   Receptor   Reference proteome   Transducer   Transmembrane   Transmembrane helix  
Feature
chain  Tachykinin-like peptides receptor 86C
EMBL
AB330454    BAG68432.1    KT031031    ALM88329.1    NWSH01005305    PCG64305.1    + More
KQ459589    KPI97475.1    DS235088    EEB11727.1    JRES01001097    KNC25564.1    JTDY01000019    KOB79390.1    CM000070    EAL29155.2    CH479185    EDW38492.1    GAMC01007028    GAMC01007027    JAB99527.1    OUUW01000008    SPP83797.1    GBXI01001966    JAD12326.1    GDHF01015519    JAI36795.1    CH954181    EDV49610.1    CM000160    EDW96830.1    KU645848    AQM36729.1    CM000364    EDX13463.1    M77168    AE014297    S80427    CH902617    EDV41572.1    CH964232    EDW80958.1    KRK03381.1    BT029262    ABK30899.1    ABW08638.1    GBYB01007702    GBYB01007704    JAG77469.1    JAG77471.1    CH480815    EDW42708.1    CH916374    EDV91282.1    CH940650    EDW67130.1    CP012526    ALC46519.1    KQ981905    KYN33605.1    CH933806    EDW13776.1    UFQS01000013    UFQT01000013    SSW97255.1    SSX17641.1    KQ982649    KYQ53117.1    SSW97253.1    SSX17639.1    SSW97254.1    SSX17640.1    KQ977935    KYM98723.1    CCAG010006431    AAAB01008859    EAA07472.5    KK107206    EZA55449.1    MG550223    AWT50657.1    QOIP01000001    RLU27239.1    GGMR01015872    MBY28491.1    ABLF02034384    ABLF02034386    ABLF02034388    GANO01003615    JAB56256.1    AB817317    BAO01084.1    AB817316    BAO01083.1    GGMS01004604    MBY73807.1    ADTU01007794    ADTU01007795    ADTU01007796    ADTU01007797    ADTU01007798    ADTU01007799    ADTU01007800    ADTU01007801    KQ980713    KYN14235.1    KQ434946    KZC12337.1    GANP01010573    JAB73895.1    KF192693    KQ971311    AGT29556.1    EEZ99366.2    GDIQ01240033    JAK11692.1    GDIQ01183122    JAK68603.1    GDIQ01069599    JAN25138.1    GDIP01186371    JAJ37031.1    GDIQ01199945    JAK51780.1    GDIQ01198643    JAK53082.1    GDIQ01100290    JAL51436.1    GDIQ01230294    JAK21431.1    GDIQ01241533    JAK10192.1    CAEY01000456    CAEY01000457    CAEY01000546    GDIP01138879    JAL64835.1    GDIQ01126131    JAL25595.1    GDIQ01197294    JAK54431.1    GDIP01204758    JAJ18644.1    GDIQ01180573    JAK71152.1    GDIQ01170574    JAK81151.1    GDIQ01180574    JAK71151.1    GDIQ01065103    JAN29634.1    GDIQ01065102    JAN29635.1    GDIQ01195642    JAK56083.1    GDIP01162384    JAJ61018.1    GDIP01126582    JAL77132.1    GDIQ01115332    JAL36394.1    GDIP01087931    JAM15784.1    GDIP01231272    JAI92129.1    GL732564    EFX77115.1    GDIP01231271    JAI92130.1    GDIP01080131    JAM23584.1    GDIQ01115333    JAL36393.1    GDIP01226161    JAI97240.1    GDIP01237521    LRGB01000868    JAI85880.1    KZS15710.1    GDIQ01269188    GDIQ01212835    GDIQ01155174    GDIQ01061953    JAN32784.1    GDIQ01160969    GDIQ01042464    JAN52273.1    GDIQ01098881    JAL52845.1    GDIQ01124323    GDIQ01093818    GDIQ01073887    GDIQ01048162    GDIQ01032118    JAL57908.1    GDIQ01078786    JAN15951.1    GDIQ01235078    GDIQ01173957    GDIQ01168623    GDIQ01136577    GDIQ01107423    JAK83102.1    GDIQ01218541    JAK33184.1    GDIQ01218542    JAK33183.1    GDIQ01130280    JAL21446.1    GDIQ01027954    JAN66783.1    GDIP01046482    JAM57233.1   
Pfam
PF00001   7tm_1
Interpro
IPR017452   GPCR_Rhodpsn_7TM        + More
IPR000276   GPCR_Rhodpsn       
IPR001681   Neurokn_rcpt       
IPR011010   DNA_brk_join_enz       
IPR000611   NPY_rcpt       
IPR007110   Ig-like_dom       
SUPFAM
SSF56349   SSF56349       
PDB
2KSB     E-value=2.98072e-37,     Score=388

Ontologies

Topology

Subcellular location
Cell membrane  
SignalP
Position:   1 - 24,         Likelihood:  0.500195
 
 
Length:
301
Number of predicted TMHs:
6
Exp number of AAs in TMHs:
134.2527
Exp number, first 60 AAs:
37.36454
Total prob of N-in:
0.99788
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  48
TMhelix
49  -  71
inside
72  -  83
TMhelix
84  -  106
outside
107  -  137
TMhelix
138  -  160
inside
161  -  191
TMhelix
192  -  214
outside
215  -  228
TMhelix
229  -  251
inside
252  -  301
 
 

Population Genetic Test Statistics

Pi
224.601575
Theta
175.065795
Tajima's D
0.937209
CLR
0.158418
CSRT
0.643617819109045
Interpretation
Uncertain
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