Gene

KWMTBOMO03435

Pre Gene Modal

BGIBMGA006367

Annotation

PREDICTED:_protein_unc-80_homolog_[Bombyx_mori]

Location

Bomo_Chr6(-):7809867-7813503      View in EpiBrowser

Full name

Protein unc-80 homolog      

Location in the cell

Nuclear   Reliability : 1.855

CDS

ATGAATCGAGAAAATCTACTAGAACTGAAGGAAGCTTGTAAGTCGTTCGAAAAAGTACTAGTTCAAAATTTGAGATTAGGTCTCTCAAGCAGTCTCACTGAGGCTATTGAATCAATACCACGATGGCGCCTCATACAAGCAGCACTGCCTCATGTCATGCATTCCTTGGCATCAGTGCTTCACACAAGAGTAAAGGACAATATGCAGTCACTTGGAAATGTGGAAACAAAGCTGTTGTATACTCTTCACTGGATCCTTCTCGATGCTTCCGATGAATGTGCTGACAATGACTATGAAAATGGCGTATTTTATTCAAACCCATTTCACTATTTGTTTTCAGTACCAACAATGACGCTATTTGTATTTCTGTTTGCACCACTTTCGCACCACCTGAAAGAATCAGACTTCACCAATAACTATCGCTTAGAAAATGGTCTAAAGATGTGGCAAGCGATGTGGGAATTTCGGCATCCTGATGCGCCTTGTTTTACAACACTTGTGAAACCAAAACCGAAGCCTTTGGGTGGAAAATATTCGAAAAGGCCACAACACAGCGACGTATTTCTTGGAAGGAAATTTTCAAAAGAAGAAGGCACGGTCAATGGTAGTCCACCAAGTCAGAATGTATCCCTATCACAGTCGGATGTGCCATCCAAACAAGCCAGCACTGAGGAGGAGCCGTGGCTATCATCACCTAAAGAAACTATTTTTCCAGAAACAATACCCGAAGAGAGTTCGAGCACCGAAGAAGAACATGTGTTTATATACCGACTTCCCTCCGAACAAAATTTTGGTGGTTCCGTGAAAGAGGCCAGTCGTTACCAGGGATAA

Protein

MNRENLLELKEACKSFEKVLVQNLRLGLSSSLTEAIESIPRWRLIQAALPHVMHSLASVLHTRVKDNMQSLGNVETKLLYTLHWILLDASDECADNDYENGVFYSNPFHYLFSVPTMTLFVFLFAPLSHHLKESDFTNNYRLENGLKMWQAMWEFRHPDAPCFTTLVKPKPKPLGGKYSKRPQHSDVFLGRKFSKEEGTVNGSPPSQNVSLSQSDVPSKQASTEEEPWLSSPKETIFPETIPEESSSTEEEHVFIYRLPSEQNFGGSVKEASRYQG

Description

Component of the na (narrow abdomen) sodium channel complex. In the circadian clock neurons it functions with na and unc79 to promote circadian rhythmicity.

Subunit

Interacts with unc79 and na. Can interact with unc79 independently of na.

Similarity

Belongs to the unc-80 family.

Keywords

Complete proteome   Membrane   Reference proteome   Transmembrane   Transmembrane helix  

Feature

chain  Protein unc-80 homolog

Uniprot

H9JA22   A0A194RNK8   A0A194PXL4   A0A2H1V856   A0A212F3A3   A0A2A4JD08   + More
A0A2A4JBI4   A0A2A4JBF5   A0A0L7L9D2   A0A2J7Q8G6   D7EIC7   A0A139WNP9   A0A139WNA1   A0A139WNA3   U4U2Y5   N6TSD9   A0A1B6MM87   A0A2P8ZPM7   A0A088AJQ7   E0VJG7   T1I3F0   A0A182TN28   A0A182TBK4   A0A088AJQ8   A0A034WR41   A0A1B0CSU9   A0A182WSD6   A0A182HL87   F5HML1   Q8T5I0   A0A2R7WR13   A0A182R661   A0A182F7L8   A0A182VZ79   A0A182MTD3   A0A182PGS7   A0A158NMS2   A0A182L9M3   E2BEX5   A0A182JHE2   A0A0L0C2W3   B4QY27   A0A0R1E518   B4NAR2   B4JRX7   B3LX38   A0A1J1HNV7   W5J732   A0A1A9Z7B3   A0A0R1EA21   B4PRB5   A0A0R1E6A3   A0A0R1E4Z3   A0A0R1E9G6   A0A0R1E4Y7   A0A0R1E4Z1   A0A0R1E5K1   A0A0R1E5F2   A0A0R1EA26   A0A182UPQ0   B3P5Y9   A0A0R1E847   B4IGU7   B4M624   A0A195DBP2   A0A0B4KI46   A0A0B4KH56   A0A1W4URK2   A0A1W4UCM6   A0A1W4URK7   A0A1W4UPZ1   A0A1W4UPP8   A0A0B4KHR1   A0A1W4UCL6   A0A1W4UD65   A0A1W4UPQ4   A0A1W4UCM1   A0A1W4UPZ8   Q9VB11   A0A1W4UPQ8   A0A0B4KHA4   E2ALP1   A0A151I0X9   A0A0L7R4E4   B4KB92   A0A151X159   A0A195C7R5   Q29BG7   B4GNX6   A0A1A9VJ27   A0A151JVR1   A0A2P6KQM2   A0A0R3NF38   A0A0R3NF00   A0A0R3NKF9   A0A0R3NFR7   A0A182N426   A0A0R3NLI1   A0A0R3NFD4   A0A0R3NKR3  

Pubmed

19121390    26354079    22118469    26227816    18362917    19820115    + More
23537049    29403074    20566863    25348373    12364791    12060762    14747013    17210077    21347285    20966253    20798317    26108605    17994087    17550304    20920257    23761445    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17350263    24223770    15632085   

EMBL

BABH01009293    BABH01009294    BABH01009295    BABH01009296    BABH01009297    BABH01009298    + More
KQ459896    KPJ19423.1    KQ459589    KPI97499.1    ODYU01001175    SOQ37033.1    AGBW02010586    OWR48218.1    NWSH01002013    PCG69434.1    PCG69435.1    PCG69437.1    JTDY01002227    KOB71851.1    NEVH01016955    PNF24872.1    KQ971310    EFA11788.2    KYB29507.1    KYB29508.1    KYB29509.1    KB631850    ERL86703.1    APGK01057001    APGK01057002    APGK01057003    KB741277    ENN71241.1    GEBQ01002919    JAT37058.1    PYGN01000001    PSN58458.1    DS235222    EEB13523.1    ACPB03010432    GAKP01002297    JAC56655.1    AJWK01026635    AJWK01026636    APCN01000884    AAAB01008987    EGK97533.1    AJ439353    CAD27932.1    EAA00911.2    KK855320    PTY21998.1    AXCM01003048    ADTU01020713    ADTU01020714    GL447885    EFN85740.1    JRES01000972    KNC26665.1    CM000364    EDX14675.1    CM000160    KRK04285.1    CH964232    EDW80876.2    CH916373    EDV94517.1    CH902617    EDV43877.2    CVRI01000006    CRK87913.1    ADMH02001961    ETN60267.1    KRK04292.1    EDW98479.2    KRK04286.1    KRK04288.1    KRK04289.1    KRK04283.1    KRK04284.1    KRK04287.1    KRK04293.1    KRK04290.1    CH954182    EDV53389.1    KRK04291.1    CH480837    EDW49065.1    CH940652    EDW59100.2    KQ981010    KYN10340.1    AE014297    AGB96405.1    AGB96403.1    AGB96404.1    AGB96402.1    GL440609    EFN65650.1    KQ976593    KYM79683.1    KQ414657    KOC65755.1    CH933806    EDW16820.2    KQ982588    KYQ54096.1    KQ978231    KYM96206.1    CM000070    EAL27031.4    CH479186    EDW38859.1    KQ981689    KYN37900.1    MWRG01006891    PRD28608.1    KRS99734.1    KRS99736.1    KRS99740.1    KRS99739.1    KRS99733.1    KRS99738.1    KRS99730.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000218220    UP000037510    + More
UP000235965    UP000007266    UP000030742    UP000019118    UP000245037    UP000005203    UP000009046    UP000015103    UP000075902    UP000075901    UP000092461    UP000076407    UP000075840    UP000007062    UP000075900    UP000069272    UP000075920    UP000075883    UP000075885    UP000005205    UP000075882    UP000008237    UP000075880    UP000037069    UP000000304    UP000002282    UP000007798    UP000001070    UP000007801    UP000183832    UP000000673    UP000092445    UP000075903    UP000008711    UP000001292    UP000008792    UP000078492    UP000000803    UP000192221    UP000000311    UP000078540    UP000053825    UP000009192    UP000075809    UP000078542    UP000001819    UP000008744    UP000078200    UP000078541    UP000075884   

PRIDE

H9JA22    Q9VB11   

Pfam

PF15778   UNC80        + More
PF18554   PheRS_DBD2
PF00043   GST_C
PF01409   tRNA-synt_2d
PF18553   PheRS_DBD3
PF18552   PheRS_DBD1
PF18569   Thioredoxin_16

Interpro

IPR031542   UNC80_N        + More
IPR016024   ARM-type_fold       
IPR041503   AIMP2_thioredoxin       
IPR036282   Glutathione-S-Trfase_C_sf       
IPR040725   PheRS_DBD3       
IPR004529   Phe-tRNA-synth_IIc_asu       
IPR004046   GST_C       
IPR006195   aa-tRNA-synth_II       
IPR040586   PheRS_DBD2       
IPR002319   Phenylalanyl-tRNA_Synthase       
IPR040724   PheRS_DBD1       

SUPFAM

SSF48371   SSF48371        + More
SSF47616   SSF47616       

ProteinModelPortal

H9JA22   A0A194RNK8   A0A194PXL4   A0A2H1V856   A0A212F3A3   A0A2A4JD08   + More
A0A2A4JBI4   A0A2A4JBF5   A0A0L7L9D2   A0A2J7Q8G6   D7EIC7   A0A139WNP9   A0A139WNA1   A0A139WNA3   U4U2Y5   N6TSD9   A0A1B6MM87   A0A2P8ZPM7   A0A088AJQ7   E0VJG7   T1I3F0   A0A182TN28   A0A182TBK4   A0A088AJQ8   A0A034WR41   A0A1B0CSU9   A0A182WSD6   A0A182HL87   F5HML1   Q8T5I0   A0A2R7WR13   A0A182R661   A0A182F7L8   A0A182VZ79   A0A182MTD3   A0A182PGS7   A0A158NMS2   A0A182L9M3   E2BEX5   A0A182JHE2   A0A0L0C2W3   B4QY27   A0A0R1E518   B4NAR2   B4JRX7   B3LX38   A0A1J1HNV7   W5J732   A0A1A9Z7B3   A0A0R1EA21   B4PRB5   A0A0R1E6A3   A0A0R1E4Z3   A0A0R1E9G6   A0A0R1E4Y7   A0A0R1E4Z1   A0A0R1E5K1   A0A0R1E5F2   A0A0R1EA26   A0A182UPQ0   B3P5Y9   A0A0R1E847   B4IGU7   B4M624   A0A195DBP2   A0A0B4KI46   A0A0B4KH56   A0A1W4URK2   A0A1W4UCM6   A0A1W4URK7   A0A1W4UPZ1   A0A1W4UPP8   A0A0B4KHR1   A0A1W4UCL6   A0A1W4UD65   A0A1W4UPQ4   A0A1W4UCM1   A0A1W4UPZ8   Q9VB11   A0A1W4UPQ8   A0A0B4KHA4   E2ALP1   A0A151I0X9   A0A0L7R4E4   B4KB92   A0A151X159   A0A195C7R5   Q29BG7   B4GNX6   A0A1A9VJ27   A0A151JVR1   A0A2P6KQM2   A0A0R3NF38   A0A0R3NF00   A0A0R3NKF9   A0A0R3NFR7   A0A182N426   A0A0R3NLI1   A0A0R3NFD4   A0A0R3NKR3  

KEGG

101744956    no KO assigned | (RefSeq) protein unc-80 homolog

GO

GO:0016021   GO:0005737   GO:0004826   GO:0006432   GO:0005524   GO:0000049   GO:0045475   GO:0034703   GO:0055080   GO:0005261  

Subcellular location

Membrane  

Length:

276

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

11.62142

Exp number, first 60 AAs:

0.0491

Total prob of N-in:

0.33258

outside

1  -  276

 

 

Pi

176.237832

Theta

145.418873

Tajima's D

0.117561

CLR

0.051307

CSRT

0.409729513524324

Interpretation

Uncertain