SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03433
Pre Gene Modal
BGIBMGA006367
Annotation
PREDICTED:_protein_unc-80_homolog_[Amyelois_transitella]
Full name
Protein unc-80 homolog      
Location in the cell
Nuclear   Reliability : 2.909
 

Sequence

CDS
ATGTCACGAAGATGCTCAGCGGAAGGCGGGTCGGGTGGTGGTGAGTCTGAAGTGGTGGTGCTGAAGCGGAGACGTCTGGTGGCGGCGGCGCCCCTGTACGCGGGGCTGGCGCGGTTCAGCTTCATGCTGGACGCCACGCAGCCGGGGGCCACGCCCGACGCGCTTTTCATGGCCGCACTCTTAGATTTACCACACACAGCGGTCGTAGGAAGAGCAGCTATTATGTTAGAATGTGCTCATTTAGTACACAACTGTAACAAAGGGCAATGGCCGTATTGGCTGAAATCTAACGTGAAGGGAGCAACTTCATTAAGCCCCCAACTCAGAAGACAACGGCTCGCTGGTAAACTTTTCTATCAATGGGCTGAAGCTATAGGAAACCGACTTGAAGAGATGTTGATTGAGGACAAGAAACACATCGAAACTGTCGTTAATTTGGTAAACGACCCGGATGGACAGCGCGAGCTTCTGCAGCAAGACGAGGAAGAAGACTTTCTAGACGAAGCCAGTATTCGTTTGCCTGGAAAACCGATTGGCGCCGATTGCCCTCGAGCGCTAAGAATCGTAGCCTGTGTGCTGTTGTTCGAAATCACTGCCTTTCTTCGCGAGACTTACCAAAGCTTGCCCAAGACATTCCGATCGTCTTTGAAAGAAAGAGGACCTTGGGACAGAGTCTACAGGGAAGCGAATCGTCGATGGAGTATGGCTTTATCGAGCATGGGACACTCACAAGCGTCCGCACAAAGCCTCCAGTCGATTGCAGGAGCTGAGACTGAAAGGAAAATATCTTTTGTTCTACATGAACCCGAAAATGTCTCTGGAGGCAGTAATGTCACTTTGGCAGATGCCATACCACCGATACAGGATGAGAAACGAGGGAAACTAGGGTCGAGGGGGAAGGGGGGAATGCATCGTCGCAACACACAGCAGGCGCATTCCGCCTACGGATCCTTCAAGAGACGCTCTATCAAACTGAGGCAGAAGGACAACAGGGAGGTCGATGAATTTATCACAAGAAGATCAGATTCCATACAAAGCAAACGTAAAGTATCGTCTCTCTCAGACCGGAGCGACACTTCAGAAGTCTATCCAGGAGCTGGAGGTACTGTAATAATGCCCAACGAAGTGGATAGCGGTGGTGAAGAAAGTCCCGGGGTGTTATCTGATGATCACGATCACCCGCCCGACAGTCCCGACAGCAACTCCACTGATCCCCCGGATACTAACAAGGGCTTCCCCTGGCTTAAGGTGATGGTGAAATTTTTGAATTCCTTCAATTACGTTTGCTGCCATCAAAACTTCTGCCACCCGTATTGTTTCCGGCGCAACATGCGAGCGAGTACGAGACTTATGAAGTCAGTACTTAAGATTTACGGAGAGAAGTTTGGTCCAGAACAAAACGCGGCAAGTTCTGAAGAATGTGTCGGCGAAGCTCGTCGTGGTAGACGAACACGGAAACCATCCGAACATTGCACTGATAGGATTGACAGATCGGTAATAGAGAGCGCTGGTCTCGCGTACAGAGCGGCGGGGGGCGAGCACGCGCTCCCGCACGCAGACGCGCCGCCCGCCGCCAAGCCAGGAGCTGTGCCCTATCCCCCTGGCGACCCCCCAGCCATACTGAAGTATCTCAAGGGGCAGGTTCGTGAAGCGTATCACACTCCACTTGCAACGCTAATCAAAGGAGCGACCACGATGAGTGAAGAAATGTTCGCCGAATCAGCTCGAGTGGCTTGGCAGCTGCTGTTAGAGTCGGACAGGGAACTGAGCTCGTGTGCGGCGGCGCTTTTTATATTGGCGGCCGTGAAAGCCCCTCAAGTTGCCACCGAGATAATGCATAATGATCTGAAGCACACCGAACCGGGGATAAGGATCAACGCTATTCTAAGGTTCCAAGTAATATGGAAACTCCGTTATCAAGTCTGGCCTCGTATGGAAGAAGGAGCGTCCATGACGTTTAAAGTTCCACCACCCGGCATCGAGTTTACACTGCCTTCGCCGAAGATCGGTATAGAGTCTTTAGCCGTTGTTGACCCACCATGGAGTCCACTCGTCAAAGACAAGGATATGGAGATGACGCTAAATCAAGAAAGACATCGTTCGTTAGTAACAGCAACGAAAACGCGCAAGAAACAACAGACCGAAGCGATGAAACTGGCACTACAGCAACAGAACGACAAGAAACGCGCCGAAAGAGAGAGCTTCCTCATCACCACCATACCCATCACGAGACAGGCCGCCAGGGAACCGGCTCTGGATCACGCGGCTGATGATCATATTGAACCACCAGCCGACGAAGAGATAGTAGAAGGCGTGCGGGGCACTCACCACACTCAAGCGGCGTCAGCTCTGTTCCCTTCTACTCTGTGCTCGGCGGTGGCGGAGATAGTTGCATTGTTGGACGACGCGGCTGTGTCCAGAGATGGATGCTCCGTGTATGAAGTTGCTTATCAGGTGATCTGGTGTTGTCTAGTGGAGGACTCTGCTTTATTCCTCCGTCATGTCCTCGAACGTCTAACGAGAGATCACCAGGACGAGATGTTCAAACTGCTCCGGCACCTGATAAGATTCATACCGCGCCTGCCGCAACAGGCGGCTTTCGCTCTCTATAACTACATCATTGGCTACGTCATGTTTTACGTGAGGAGTCCGCACGAGGAGGGACAGAGGCTGGTCGGTGCCGCGCTATCTATATTATGGATGGTAGTACACAGCGTGCATGGTATAATGTTTAAGGATTTGAAGCAAATCTTACGTAAAGAACAATGTGACGCATCCATATTGCTAACGGCGAACGTGCCAGCTGCCAAGAAGATTATTGTTCATGGTCCATCTGATAACGAAGGAAGCATCCCATCACAATTTCCTGTCCAAGAGGATACAGTGTTTGCTCAAATTTTGAAAGAATCCTTAGACTTCTTCAGTATACCAGAAAAATTGCACAAGGAACACTTTCTTGTTGATTTCAAAACGCGTCAAATCCACAACCCTCAGAATTACGTGCGTGATCACTATTTCTTCAAACGTTCGCAATATCCTCAGCTAGGCCTAGTCCACATGGAACCCGAGGAGGCGTTCAACAAACTGCAACAGCAAGAATTGCTTCTCAAGTTCATAGAAATAGGAAAAGTTTTGCTCACTTGGGCGATTCTCAAAAATGTTGATATGGTGGTACAGAGAGTGGTATTCTTGCACGACGAACTTATGAAACTACCCTCGTTTCCTCGCAAAGCACTCGAAGCCGATCTAACGTTGTACAGTCGGGGACACCTTGGCACCACTTTATTGGGACTCGATGTATTACACAAATTTATGTGGGTTCGTTTGATCGCACGCATGTTCGAAGCGATGGCCGGAAACTTCACGTCTTCACGCGACATACATTTGTTTTTGAACGTATTGAACGGTGCATTAATGCTTCACAGTGAAGACGCATTAATATTAAGATACGTTATTGCTACGTACGTAAACGCTGCATCGAACTTCAAAAGTATATTCTCAACAAATGGGTATTTACTGATCATGCCAACACTACTTCAAATCTATTCAAATTTTCAAACAAACAAACTTGTAACAACTACAATTGAATACGCAGTGAAACAATTTTACTTATTGAATAGAAAACCATTTATACTACAAATGTTCGGATCAGTGTCGGCCATATTGGATACTGATGAAGAATCTATTTACGGGGACGCAAGCAAAGTGCAGTCCAGTTGTTTGTTCAACTTGCTTCTCAGCTTAGAAACGCCGTCCCCGGATCCACTACACATAGCCGAACTAATCAAAGAGGACAAACCTTTGAAACCAATAGATTTTTGCTACCGTGACGAAGAGGAGATGGTCAACGTACTGGACTGCATCAGTTTGTGTGTGATGGTCGTATCATATTCAGCCGAGAGTTTCAGAGGGTATCAAATGTTGATAATACTGGAAGCAATATTGCCTTGCTACGTCAAGCAAATAGAGTCTCCCACTTATAACAGAGAAGGTAAAACGGAGAAAGAGATTATTCAACAGCTCGCCATTGCCATTAAAACTCTGGTCAACAACTGCGAGGGATTATCCAAATCGTACAATGGGCCGTATCGGACATCGCCCGAACATAAGGGTTCGTCCCAGAGAGCCGGTCAACGTACCACGGCCGCCACGATCATAGCTTTTGAAGAATCGCATTCAAAATTCGACAACTCCAAGCTGCCAGTGCAAGAATACACTGGTACCGAAGACTCGGAACTGGTGCGCGCAGAATACCGTCGTCCTAGAGACGTGCTGTTGTCGTTGGTCGGCAACTTCATAGGGCACGCCACCGCGCGCCTCATTGAACTGAACGGGTCCAAGGGCAGCGGCGGCAGCGAGGGCAAACCCGTCGAACTCTTGGACTGCAAGTCACACGCTCGCTTAGCCGAGATAGCCCACTCCCTGCTGAAGGTGTCGCCGTACGACCCCGAGTCGATGGGCTGCCGCGGGCTGCAGCGGTACATGATGGACGTGCTGCCCGCCGCCGACTGGGAGAACGACGCGCTGCGGCCCGCGCTCAACATGATCCTGCGCCGGCTCGATAAGGTCTTCCTGAAGATCGCCAAGAAACCGAGCATACGGAGGAATACAGCATGGGATTCAGCAGCGACATTACTGAAAGGCGTGTACGAAACGATGACGCGATGCACGTACATAATGCAGTGGCCACAAGTGAAGACTCTCCTCAATACGATCCAAGCGTTGATAGTGTCGGATAACAACAGCGGCGAGAACTTGTCTTCCGCGACTGCCGCGCTGATGTCTCAGCCGCCACCTCCACACTTTTGCAGCACCGTCGTCCGACTAATTGCACTGCAAGTCATTAACACCGGGGATAGCTACTCTTTAGAACAAATGTGTGGTGGCAGCGCGATATTTCCTACAGCCGAGAAAACGGAGAATATGCTTATGAATCTATTCATGCCTCTGTGCTTAAGAGTCGGCAGTGGGAGAAAAGACGTTCCTCCGTTGCGGCAGTCGGACGTGAGCTACTTGGTGTCGGTGGTGCTGAACGCGCTGTGCCCGCCGGCGCCGCCCGGGCAGCTCGCGGCCGTCAACGCCAAACTGAACGCGTCCGACGCGCGCGTCAACTCGCTCACCTTCACCGGCAGCAGGGACACCAGGAACACGACCAGGCTGTCCAACCAACTCTACCGGATCGCGTTCCTAGCGTTGAAGGTGTTGTGCGCGTGCTTCACGAGCGAGCTGTGCTCGGAGTGGGGGAGGATAGCGCGCGCCATGCGGGAGCTCGGCCGCCGGAACGAGGCAGCGCATCACTTGTGGGACTTCCTCGAGCACGTGGTCACCTACCGCACGCCGCTCTACATACTGCTACAGCCCTTCATCGTGCACAAATTGTCCCAGCCGCCGATCGGCGACAACGAGCGTCACATGCAGTTCGTGGTCCGCGAGCGCGTCCGCGGCCTCAAGCTGCCCGCGGCCCGCGCGCGCGGCGCCCTACTCGCGGAACTCGCACGGGAACTCCGCAACATGAGAGAGACACACGACCAGTTTAAATTCGAACAAATAGCTGAAAATCTTGGACAAGCGGGGGGTAAGCGCGCGTCTGAAGTGTTCCCGCGGCCTCCAAACATGTCGGACAAACATCAACAGCACCGGCCCTCGTTGATCTCCATGCTGGTGGGGCGGACCGGCGCGAGCATTCCGCGCACCCCCGACCATCCCTCGGCACCCCTATCTGCCCAAAGAGCTTTTGTATATTCAGAGTCACTGTCGAGCAGTTCAACGACCAGCCAACAGATGCCCACTTTCGACGTGCCTCTGATCAGTGGACGACTCAATGACAACGGCACGAACAACACGAGCAGCATCAACTCTAATATAGGTTCGCTGAACAATTACGGCAGCGATACAAAGCTCGCGGTGAGCACACCGTCGTACACGAGCGCACCCGCCAAGTTACGGTTCGTTCCTTCCGTCGAGCTGAAGTTCACGTCGGAGCAAGGCGAAGGGTCCAGGCCGTTCTCGCCGCTGTCGCCCGGAGACACGTCGTGCGGGGAAGCGCGGGGAGGAGGAGGCACGGACAGCCCTGACGACCGGCCTCGTCTGCAACGGGCCCACGGGCCTTCAAAGAAAACATTCAAGTTCCGCCGCAGCCGACACACCAAGCCGGACGCTCGTCTGGAATCTGACGAAGGTTCATCTCCCGGCGAGGGGAGACGGCTGAGCGTTGCGCCGTTACTGCAAGCCCAACCATTTCCGGATACGTCGTGTGACAGTGAACCTTCGCAAACTTCCTCTACGTCCGGATACAGGGAGAGCTACAGCCTGCAGGCCAGCATGGCGGAGTCCCCGGGCGGCACGTGCCGAGCGGCGCCCCGCAGCGCCAGCACCACGCCGCACGCCAGCCCCGACGCATCTCTAAGTTATGAATCTGGAACATCATCCGCTGAACGTACCGCGCTACTCGGAGCTGCTAGCCAGCGTTCCCTTTTGCTAAGTGGCGACTTAAGAGATGAAGATACTTTACTTTAA
Protein
MSRRCSAEGGSGGGESEVVVLKRRRLVAAAPLYAGLARFSFMLDATQPGATPDALFMAALLDLPHTAVVGRAAIMLECAHLVHNCNKGQWPYWLKSNVKGATSLSPQLRRQRLAGKLFYQWAEAIGNRLEEMLIEDKKHIETVVNLVNDPDGQRELLQQDEEEDFLDEASIRLPGKPIGADCPRALRIVACVLLFEITAFLRETYQSLPKTFRSSLKERGPWDRVYREANRRWSMALSSMGHSQASAQSLQSIAGAETERKISFVLHEPENVSGGSNVTLADAIPPIQDEKRGKLGSRGKGGMHRRNTQQAHSAYGSFKRRSIKLRQKDNREVDEFITRRSDSIQSKRKVSSLSDRSDTSEVYPGAGGTVIMPNEVDSGGEESPGVLSDDHDHPPDSPDSNSTDPPDTNKGFPWLKVMVKFLNSFNYVCCHQNFCHPYCFRRNMRASTRLMKSVLKIYGEKFGPEQNAASSEECVGEARRGRRTRKPSEHCTDRIDRSVIESAGLAYRAAGGEHALPHADAPPAAKPGAVPYPPGDPPAILKYLKGQVREAYHTPLATLIKGATTMSEEMFAESARVAWQLLLESDRELSSCAAALFILAAVKAPQVATEIMHNDLKHTEPGIRINAILRFQVIWKLRYQVWPRMEEGASMTFKVPPPGIEFTLPSPKIGIESLAVVDPPWSPLVKDKDMEMTLNQERHRSLVTATKTRKKQQTEAMKLALQQQNDKKRAERESFLITTIPITRQAAREPALDHAADDHIEPPADEEIVEGVRGTHHTQAASALFPSTLCSAVAEIVALLDDAAVSRDGCSVYEVAYQVIWCCLVEDSALFLRHVLERLTRDHQDEMFKLLRHLIRFIPRLPQQAAFALYNYIIGYVMFYVRSPHEEGQRLVGAALSILWMVVHSVHGIMFKDLKQILRKEQCDASILLTANVPAAKKIIVHGPSDNEGSIPSQFPVQEDTVFAQILKESLDFFSIPEKLHKEHFLVDFKTRQIHNPQNYVRDHYFFKRSQYPQLGLVHMEPEEAFNKLQQQELLLKFIEIGKVLLTWAILKNVDMVVQRVVFLHDELMKLPSFPRKALEADLTLYSRGHLGTTLLGLDVLHKFMWVRLIARMFEAMAGNFTSSRDIHLFLNVLNGALMLHSEDALILRYVIATYVNAASNFKSIFSTNGYLLIMPTLLQIYSNFQTNKLVTTTIEYAVKQFYLLNRKPFILQMFGSVSAILDTDEESIYGDASKVQSSCLFNLLLSLETPSPDPLHIAELIKEDKPLKPIDFCYRDEEEMVNVLDCISLCVMVVSYSAESFRGYQMLIILEAILPCYVKQIESPTYNREGKTEKEIIQQLAIAIKTLVNNCEGLSKSYNGPYRTSPEHKGSSQRAGQRTTAATIIAFEESHSKFDNSKLPVQEYTGTEDSELVRAEYRRPRDVLLSLVGNFIGHATARLIELNGSKGSGGSEGKPVELLDCKSHARLAEIAHSLLKVSPYDPESMGCRGLQRYMMDVLPAADWENDALRPALNMILRRLDKVFLKIAKKPSIRRNTAWDSAATLLKGVYETMTRCTYIMQWPQVKTLLNTIQALIVSDNNSGENLSSATAALMSQPPPPHFCSTVVRLIALQVINTGDSYSLEQMCGGSAIFPTAEKTENMLMNLFMPLCLRVGSGRKDVPPLRQSDVSYLVSVVLNALCPPAPPGQLAAVNAKLNASDARVNSLTFTGSRDTRNTTRLSNQLYRIAFLALKVLCACFTSELCSEWGRIARAMRELGRRNEAAHHLWDFLEHVVTYRTPLYILLQPFIVHKLSQPPIGDNERHMQFVVRERVRGLKLPAARARGALLAELARELRNMRETHDQFKFEQIAENLGQAGGKRASEVFPRPPNMSDKHQQHRPSLISMLVGRTGASIPRTPDHPSAPLSAQRAFVYSESLSSSSTTSQQMPTFDVPLISGRLNDNGTNNTSSINSNIGSLNNYGSDTKLAVSTPSYTSAPAKLRFVPSVELKFTSEQGEGSRPFSPLSPGDTSCGEARGGGGTDSPDDRPRLQRAHGPSKKTFKFRRSRHTKPDARLESDEGSSPGEGRRLSVAPLLQAQPFPDTSCDSEPSQTSSTSGYRESYSLQASMAESPGGTCRAAPRSASTTPHASPDASLSYESGTSSAERTALLGAASQRSLLLSGDLRDEDTLL

Summary

Description
Component of the na (narrow abdomen) sodium channel complex. In the circadian clock neurons it functions with na and unc79 to promote circadian rhythmicity.
Subunit
Interacts with unc79 and na. Can interact with unc79 independently of na.
Similarity
Belongs to the unc-80 family.
Keywords
Complete proteome   Membrane   Reference proteome   Transmembrane   Transmembrane helix  
Feature
chain  Protein unc-80 homolog
EMBL
NWSH01002013    PCG69436.1    PCG69437.1    PCG69435.1    PCG69434.1    KQ459589    + More
KPI97499.1    ODYU01001175    SOQ37033.1    AGBW02010586    OWR48218.1    KQ459896    KPJ19423.1    KQ971310    KYB29508.1    KYB29509.1    KYB29507.1    EFA11788.2    GEZM01033851    JAV84087.1    GEZM01033850    JAV84089.1    AXCN02000022    CH477851    EAT35636.1    ADMH02001961    ETN60267.1    JXUM01081933    JXUM01081934    JXUM01081935    KQ563278    KXJ74140.1    AXCM01003048    AAAB01008987    EGK97533.1    AJ439353    CAD27932.1    EAA00911.2    APCN01000884    GEDC01010741    JAS26557.1    GEDC01028119    JAS09179.1    GEDC01027705    JAS09593.1    ATLV01012582    ATLV01012583    ATLV01012584    KE524806    KFB36885.1    DS232275    EDS38925.1    UFQS01000014    UFQT01000014    SSW97293.1    SSX17679.1    CH479186    EDW38859.1    QOIP01000007    RLU21092.1    CH916373    EDV94517.1    DS235222    EEB13523.1    KZ288357    PBC27123.1    GAKP01014707    JAC44245.1    CH933806    EDW16820.2    CM000160    KRK04291.1    AE014297    AGB96404.1    AGB96403.1    KRK04287.1    KRK04289.1    KRK04285.1    AGB96405.1    KRK04290.1    KRK04283.1    EDW98479.2    KRK04284.1    KRK04286.1    CH902617    EDV43877.2    CH480837    EDW49065.1    CH940652    EDW59100.2    KRK04292.1    KRK04288.1    KRK04293.1    AGB96402.1    CH964232    EDW80876.2    CM000070    KRS99732.1    EAL27031.4    CH954182    EDV53389.1    KRS99740.1    OUUW01000005    SPP80705.1    SPP80707.1    SPP80708.1    KRS99738.1    KRS99733.1    KRS99736.1   
Pfam
PF15778   UNC80
Interpro
IPR031542   UNC80_N        + More
IPR016024   ARM-type_fold       
SUPFAM
SSF48371   SSF48371       

Ontologies

Topology

Subcellular location
Membrane  
Length:
2171
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
36.0391100000001
Exp number, first 60 AAs:
0.40599
Total prob of N-in:
0.02303
outside
1  -  2171
 
 

Population Genetic Test Statistics

Pi
194.566957
Theta
166.804212
Tajima's D
0.113872
CLR
118.146871
CSRT
0.39718014099295
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号