Pre Gene Modal
BGIBMGA006506
Annotation
PREDICTED:_transcription_elongation_factor_B_polypeptide_3_[Papilio_xuthus]
Location in the cell
Nuclear Reliability : 3.994
Sequence
CDS
ATGGCGTCTGTTTTAGAATTAGTTAAATACTACCAACATAGTCTGGAAAAGAATTCTCACGACGAACCGAAAATTTTAAAATGCATAGACAAACTGAGTCACTTAGATGTGACAGTTCAACACTTACAAGAAACAGGTATAGGCCGGACTGTCAATGCATTACGAAAAGAACCAGGAGATGTTGGTCCTGCAGCCAGGGCTCTTGTTTACAAGTGGAAAGCAATGGTAGCAGCTGAATCAAGCGATAATGAGGGGGAGTCAAATACAGAAAACACTCACAATGGGCAGAGAAATGATAAAGATAGAGAACCTGATAATAGTCAATACACTAAAAACCAATCTGAACATCGGGAAAGCATTTCAACTGCGCCTAAAACAAATCAACAAGTTCACAGAGATATGAATGGCCACCATGGTGGCAGCAAGAGGAAAAGCCATAGCAGTGAGGAAGAAGAGCCCGACCACAAACGTTCAAAACAAACAAGTCATAGTGATGATAATTACAAGAAACATTCTGATGCACGAGAACAAAATGATGAGAGCGAAAGCGACAGTTACGAATCTGACGATTCTGAAAGTGACGATAGCGAGTCCGACTCTTCGGATTCCTCTGTTGAAGAAGTAAAGGTTAAAGAAGAAATTAATAAAACACGGTCTGACGAGAACAAACTATCAAAACATTCTTCACACAACAACCACGTAGACCACAAAAGGGAAACCTCAAGCTCAAAGAAGCAACACGAGGCTGACCCCAAACATACCGAACATCATAACTCGAAGTCGAAGCGCAGGCATTCGCCAGAAACATCGTATGAAAAATCACACCACTCTCATAGACACAAAAGCTCTAAGGAAAAAGAAAGCAGCAGCAAAGAAGCAAAACATAAATCAGACACAGATAAACATTCAGACCATTCACAGAGTAAAGATTCGAAAACGGGCAAATCATCAAGCAGTCATCACAGTTCATCGGCATCAAGTAGGCATCATAGCTCAGACAAACACAAGTCTAGTTCCAGCTCTCAAAAACATCATAATGAAGAACCGAAAATCAAACCTGAAAGACATTCCAGTCATTCAGACAAGCACAGAAGTTCCAGTGAGTCAAAAAGCGCAGAAAGGAATAAGAGTTCGTCTGAAAAAGATATTCCGAAACACAAATCATCAAAAGATAAAAGTAGCAGTAAAGAAACATTTAGTAGTAAAGATAAAGACAGACATAGTTCCTCTAGCAAGGAAAAGTCAAGAGAAAAAAGTAATTCTAAGGATAAATCGAGCACCAATAGTAATGATAAGAAGCATTCGTCTTCAAGTGATAAACACAAATCAAGTAAGAGCGAAAGCAAATCGTCAAAGAATGAAGAGAAGAGTAGTGAAAGTAAATCTAAACATAAGTCAAGTTCCTCGTCGGATCACAAAAGTAGTAAGAATAAAAGAAAAGAAGAACCAGAACCAAAGAAAAAGGCCCGTTTAACCGACGAGGACAGTGACGATGGCATCGACTGTGAATCAGGTGCGAGTTTTGCTGAAGCATTGGGCATGATCAGTCCAGCGAAACCGAAAAAGAAATCGTCACAATTGAAAGACAGTATATCTCCTAACAACATATTCGGTAACGATATGAGTCCGGCGGCTATGTTGGCTCCGACTGCAAAATTGGCGCCTTTGCCGGCATTAGAAATATCTGCACTACCAGAGATATCGCCGAACTACAAGCCCCGACCGCCTCCTAAATTTATGTTCAATTTCACAGACGAGGAGGCCTTAAGTGCAGGAATATCATCGAAAAACCAAAGAACCAAAGTGTATTCCGGGAATAAGGTCATAGGAAAAATACCAACTCTGTATGAGATATGCGTTAACATTCTCCAAGAGCACATTGACGCACTGGAGTACACAGGCGGTGTGCCATATGAAATATTAAAGCCTGTGGTAGACAGAGCAACTCCGCAGCAGTTATTCACACTAGAACATTATAATCCTTACCTCATGGAGGACACGGACCATCTCTGGCAGAAGTTCTGTGAGAAAACATTCAGAAACAAAAAGAGGCAAGAAATGGAGACGTGGAGAGAGATGTTCATGAGATGTCAAGAAGAACAAGAACACAAATTGAAGTCTCTGACGGCAAACATAAAAATAGCGCAGGAAGCGAAAAAGGCTCCGATTAAACAGACAAAAATGGCGTACGTTGATAGCGTCGTTAAGCCTCCCCGAAATATTGCCAGAAAGCAAGCGGTGCACGGCACGGCGCGCACGGCAAGCGCCAGTCCGGCGGCGCGCGTGGCCGCGCTGGCGTCGTCCGCCAACGTGATGAAGGTGGGCGCCGTGCGGCCCCCGCCCGCCGCGCCTGTCGCCTCCTCCGCACTCAACAAGCCCAAGAAGGCGCCGCTGATGCAGAAGGCCCTGCAGTTCATGCGAGGCCGCAAGCGATGA
Protein
MASVLELVKYYQHSLEKNSHDEPKILKCIDKLSHLDVTVQHLQETGIGRTVNALRKEPGDVGPAARALVYKWKAMVAAESSDNEGESNTENTHNGQRNDKDREPDNSQYTKNQSEHRESISTAPKTNQQVHRDMNGHHGGSKRKSHSSEEEEPDHKRSKQTSHSDDNYKKHSDAREQNDESESDSYESDDSESDDSESDSSDSSVEEVKVKEEINKTRSDENKLSKHSSHNNHVDHKRETSSSKKQHEADPKHTEHHNSKSKRRHSPETSYEKSHHSHRHKSSKEKESSSKEAKHKSDTDKHSDHSQSKDSKTGKSSSSHHSSSASSRHHSSDKHKSSSSSQKHHNEEPKIKPERHSSHSDKHRSSSESKSAERNKSSSEKDIPKHKSSKDKSSSKETFSSKDKDRHSSSSKEKSREKSNSKDKSSTNSNDKKHSSSSDKHKSSKSESKSSKNEEKSSESKSKHKSSSSSDHKSSKNKRKEEPEPKKKARLTDEDSDDGIDCESGASFAEALGMISPAKPKKKSSQLKDSISPNNIFGNDMSPAAMLAPTAKLAPLPALEISALPEISPNYKPRPPPKFMFNFTDEEALSAGISSKNQRTKVYSGNKVIGKIPTLYEICVNILQEHIDALEYTGGVPYEILKPVVDRATPQQLFTLEHYNPYLMEDTDHLWQKFCEKTFRNKKRQEMETWREMFMRCQEEQEHKLKSLTANIKIAQEAKKAPIKQTKMAYVDSVVKPPRNIARKQAVHGTARTASASPAARVAALASSANVMKVGAVRPPPAAPVASSALNKPKKAPLMQKALQFMRGRKR
Summary
Uniprot
ProteinModelPortal
PDB
4HFX
E-value=1.5083e-17,
Score=222
Ontologies
GO
Topology
Length:
811
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00239
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00009
outside
1 - 811
Population Genetic Test Statistics
Pi
218.667408
Theta
182.520895
Tajima's D
0.505328
CLR
0.001055
CSRT
0.52022398880056
Interpretation
Possibly Positive selection
