SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03426
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC106708942_[Papilio_machaon]
Location
Bomo_Chr6(-):7640600-7646496      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 1.855
 

Sequence

CDS
ATGGCTAGTTTTAAAAAGATACTACCCCAGGAGGGTACCTCCCGCTCCGCGGGGGGAGAATCCCTCCGTGCGTTCGACTCGTCGGACGCACGCTGCCCCACGTACTCTGGGGGGGGCAAAAACTGCCTAGACGTCAGGTCCGGGAAGGACGGAGTTCAGAGGAAGATGTCCGAGAAGGACCTTGAAGTAAGCTCCTTAAGAGCCAATGTCGTGTCAGACGATGACATGGCCACAGTCGGTTCGGCCCAATCGTCGACCCGCTCGTCGCCGACACGACGACAGCGGAAAAGGGTCCTTAATATAAGCTCAGACGGGTTGAGCAGCAGCTCCGGTTCGGAGGCTCAGGGCCCGTCAGTTGCGAAGCCCAGAGCCGTGACGCCATCAAAGCGTGGAAGGGGACGCCCTCCGACCACGAGGCAGTGCGTTGGCATGGCTGCTGCCAGGAAGGCGTGCCTTAGGGCCCAAAGAGAGGAGAGGGAGTTCACAGAGAGCGCGCGCACCACGCGCCAGAAGAAGAGAGCGGCTGAGGGATCTGTCCCTAAGCCTGATGCCGAGCGTAGGCTCCATCAGAGTGCTGAGGTGGCTCTGACGGTGGCCGCCAAATCTAGTAGCCCGAAGGGCACGTATGTGCGTGCATTGAAGGAGTTGGCGGCCACCGTCAAGGAGGCCACGGAGGACCTTGTGGGCCGCACCGCAACTGAAGAGGCTGAAAGACTGCGTGCGATCAACGCCAAGCAGGAGCAGGAGATCCTACAGCTTCGCAAGGAGCTTGATGAAATTAGGAGGGAGCTGGCTACGGTCTCGCAGGTGCTAGGAAATGCACCAGCCGCAGCCCCGGCCCCAAACACCGAAGAAGAAGAGGAGGAGTTGCGCCTCCAGCGCATTATGCGAGCTGTCGGCACGATGCTCGACGCTCGCTTTGCGGGGCTAGAGGGACGGCTTCTACCGGAGCCGCGAATGCGACCACCGCTAGCGGCGGACAGGCGGAAGAGCCGCGAAAAATCACCGGACCCTCCTATGGTCGTAGACGCTACACTGAATTCGGCGCCATTATTGAAACCAGTGCCATCTACAACATCGGCGAAAAAGAGGATACGAGGCCCCAGAAGAAAAGCCACTGCGCAAGTGGCTCCACCTGGAACGCCCACCCTCCTCCCGGCTCCAGCTTCCTTGATCGAGAGCTGGTCAACGGTCACCCGTAGGGGCACTCGGCCGAGGGAGGGAGCAGTGAGGACGGTTCCAGTGGTAGCACCCGCTGAAGCGGGAAAGAAAAACCCGTCCTCTGCAAAGAGGAAAGAGAAGAAGCTGCGTCCTCCGCGCTCTCAAGCTGTAGTGCTCAAGCTGCAGCCGGAGGCTGTAGAAAGAGGACTCACATACCGCAGCGTACTCGCCGAAGCGAGAGCCAAGGTGGACCCCGGGGCACTCGGAATCCCCATCCAGCGCATCCGGTCTGCAGTGACTGGGGCCAAGGTGTTGGTAGTGGAAGGTGCTGATCAGAGCGCCAAGGCTGATCTCCTGGCCCAAAAGCTTCGTGAGGTTCTGTCCGCGGAGGGGGTCATCGTGACCCGGCCAGTGACGACTGCAGCCATCCGCATCAGCGGGCTGGATGACTCCTTGACGCCGGAGGAAGTAGCCGCTGAGCTCGCCCGGATTGGCGAATGCACTCTTGAAGCGGTGAAGATCGGAGAGATCAAGTCTGGCCCAAGTGGGATGGGTCAGGTGTTGGTTCGGTTGCCCGTCGCTGCCGCGACGAAGGTCCTCGCCGTACCGAAATTGAGGGTCGGTTGGAGCGTGCTCCGCGCTCATCTGCTAGAGGCTAAGAAGCTACAGTGCTTCCGATGCCATGAGCTAGGGCACGTGAGCGCTCGATGTCCGTCGTCGGTCGACCGCAGCCGTGATTGTTACCGGTGCGGCCAGACCGGCCACGTAGCGTCCGGCTGCTCTCTGGCGCCACACTGTGCTGTATGTGCCTCTGCCGGCAGACCGGCGGATCACGTCTCCGGGAGCAAGGCTTGTGCCAAGTCCCCGAGACCGAGACCTAGAAGAGGAGCTTCCGCTGCGCTTGAGCATGCGCGGAGGCAGCCCGGTGTCCTTCGATTCCTGCAGGGGAATCTCAATCACTCTGCCAGAGCTCAGGACCTTTTGTTCCAGAGCATGGCAGAGGGGTTGACCCATCTTGCGGTGGTCGCCGAGCCGTATCGGGTTCCTTCGAGCCCCGATTGGGCAGCCGATTTGGAGGGCCGAGTGGCTATCATCCGACGTTGTGGTGTAGGTGCTCCGCCCAGGTTCGACGTTGTCGAGAGAGGTTGCGGCTTTGTTGCTGTCCTCTGGGCCGAGGTATTCATATTGGGAGTGTACTTCTCCCCAAACAGGACGCTCGCCGAGTTTGAGGTTTTTCTCAGCGAGCTCAGCCGCGTCGTTGGGAGGTCGCACTCCCAACGGATACTCGTTCTCGGGGACCTCAACGCCAAGTCATTGGCTTGGGGATCCTCGAGGACGTGCCCCAGAGGTAGGGCGGTGGAGGAGTGGCTGGTCGGAAGCGGTCTTCTCGTCCTCAATCGTGGCGCAGAACTCACGTGCGTGCGACGTCTGGGCGGGTCCGTGGTTGACGTTACATTTGCCACGCCCGACGTGGCGAATCGCGTACGCGGTTGGGCCGTGATGGTCGGCGAGGAGACGCTCTCCGACCACCGCTACATTCGTTTCGGTGTCGCAGTGCCTCCGGCGGAGTCTATCCAGGGCTCTTCTTTGCTCTGCGGTGGCGGCGCGGGGGGTCCTCGTTGGGCCCAGAAGCGCCTCAACGTCGAGAGGTTGTGTGAGGCGGCTGTAGTCCAGGCATGGCGTCTTGACTCGCTTGGTGAGCCAGCAGACGTGTGCGAGGGGGTGGAGCATCTGCGCGAGGCGATGTCGCGGGTGTGCGACGCCGCTATGCCTCGCATTAGAGCTCTCGCTCCTAAACGCAGAGTCCACTGGTGGACTGAGGAGATCGCTAGCCAGCGCCGGTTGTGCGACGTCAGTCGTCGCGCATACCAACGGTATCGACGTCGAAGAAGGCACCGGGACCCCGATGAGGAGGACCGACTGTACGAGGTGTACAGGATGGCCATAAGGGCCCTGCGCGTGGCTATCGGGGAGGCGAAGGAGGCTGCTTGGAACGACCTACTAGCTTCGCTCGACTGTGATCCGTGGGGGCGGCCCTACAGGCTGGCGCGCAATGTGCTCCGCCCTTGGGCCCCCCCCGCAACCAGCACCCTGCCGCCGGAGACATTGCAGCGGGTAGTCGGGGGTCTGTTTCCGGATTTTACCGGGACGGCCTTCGTCCCCCCTGTGATGACGACGATGCGGGTTGCTGATGGCGGGGAGCCTGCGGACGTTTCGCAGGCGGAGTTTGAATCGGCTGTGCAGAGGATGCGGGCGAAGCGCACGGCTCCCGGTCCCGATGGGATCTCGTCCCGAGCGTGGGCGCTCGCCTTGACGGGCGATGGTTTGGGGCCTGCCCTCCGAAGGCTGTTCAGCCGGTGCCTCCGTGAGGGCAGGTTCCCAGAGCCATGGAGGACTGGTCGGCTCGTCCTTATTCCTAAGGAGGGTCGGCCACGTGACGAACCGAACGGGTACCGCCCAATCGTCGTGCTGGACGAGGCCGGTAAGCTCTTCGAGCGCGTCATCGCTAATCGCCTTGTCCAGCACCTGGAAAACGTTGGGCCTGATTTGGCTCCTAACCAATACGGTTTCCGGAGGGGTCGCTCGACCGTGGACGCGGTCTTGCGTGTCCGCCATCTCTCCGATTGTGCGTGCTCCGAGGGGGGCGTGTTGTTGGCTGTGTCGATTGACATCGCCAACGCCTTCAACACGATCCCCTGGAGCACGATCGTGGAATCACTTCGGTTTCACCGCATCCCCAATAGTCTCCGCACCCTGATAGAGGACTACCTCTCAGGGCGGAGCGTGATTTTCCCTGAGAGAAGAGGATGGGGACGAAAAACGGTGTCGTGCGGGGTCCCACAGGGGTCGGTATTGGGACCACTCCTGTGGGACATCGGTTTCGACTGGGTCCTCCGCGGTGCTGGCCTGCGTGGCGTCGACGTGGTGTGCTATGCCGACGACACGTTGGTGACGGCTCGCGGAGCTGACTACAGGACCGCAGCGATCCTTGCAACGGCGGCGGTCTCCACCGTCGTTAGCCGCATTCGGAGACTAGGTCTTGAGGTGGCCCTCCACAAGTCTGAGGCCGTATGCTTTCACCCGGTTCGGAGAGGACCCCCTCCGGGCGCGACGCTCATAGTCGGTGGAGTATCGATCGCTGTCCAGCCGAAGCTCAAATATTTGGGCATCGTGCTGGACAGTCGATGGCGCTTCGACCACCATTTTGGTGAGTTGATTCCGAGGCTACTGGGCATGGCAGGTGCGTTAGTCCGTCTTCTTCCCAACGTTGGTGGTTGCAGCGTCGGTGTCCGACGCCTGTACCTGGGGGTCGTGCGCAGTATGGCCTTGTATGGCGCTCCCGTGTGGTCGCCCACACTCTCCGCACGCAATGCGGCGCTGCTGCTCCGAGCTCAGCGGGCGCTCGCGGTGAGGGTCATCAGGGGGTACCGTACGATCTCCCGAGAGGTCGCCTGCGCCCTCGCTGGTTCCCTTCCTTGGGATCTCGAGGCCGAGGTATTGGCTACGGTATACCGGCGCAGGACACAGTCCCTGGGTCGGGGACGGACACCCGGCCTGTCGGCTGTCAGTCGGTGGAGGCGTGCTGCGCGTCATCTGGCGTACGCTAAATGGAGGGAGCGGTTGCTGGAGGAACTTCATCAAACCTCAGCCACCCGCCGGCGCACTCTCGAGGCCCTGGTGCCCGTGCTGGAGACATGGTCAGATCGGCGACACGGCGTGCTCTCCTTCCGCCTTACGCAGGTCCTCTCGGGGCATGGCTGCTTCGGGAGGTACCTGTGGAGGGTTTGCAGGAGAGAGCCACATCCGGGTTGTCACCAGTGCGGGCATCCGGATGATGACGCTCAGCACGCACTCGAAGCGTGCCCGCGTTGGGAGCACCCGCGGCGAGATCTCATCGCGGTGCTGGGGAGGGACCTCTCCTTGCGGGCTGTCATTGCCCGCATGCTAGAGGACGAGAGTTCGTGGGAGGCCATGGCCAGATTTTGCGACCTGGTCATGGCGTTCCGCGAGGCTGAGGAGCGCGAAAGGGAGTGGAATCCCTCTTCGGCTCCTCAGCGAAGAAGGCGGGGTGGGCGACGCGGGCACGATGCTCCCGTTAATCTCCCGTAG
Protein
MASFKKILPQEGTSRSAGGESLRAFDSSDARCPTYSGGGKNCLDVRSGKDGVQRKMSEKDLEVSSLRANVVSDDDMATVGSAQSSTRSSPTRRQRKRVLNISSDGLSSSSGSEAQGPSVAKPRAVTPSKRGRGRPPTTRQCVGMAAARKACLRAQREEREFTESARTTRQKKRAAEGSVPKPDAERRLHQSAEVALTVAAKSSSPKGTYVRALKELAATVKEATEDLVGRTATEEAERLRAINAKQEQEILQLRKELDEIRRELATVSQVLGNAPAAAPAPNTEEEEEELRLQRIMRAVGTMLDARFAGLEGRLLPEPRMRPPLAADRRKSREKSPDPPMVVDATLNSAPLLKPVPSTTSAKKRIRGPRRKATAQVAPPGTPTLLPAPASLIESWSTVTRRGTRPREGAVRTVPVVAPAEAGKKNPSSAKRKEKKLRPPRSQAVVLKLQPEAVERGLTYRSVLAEARAKVDPGALGIPIQRIRSAVTGAKVLVVEGADQSAKADLLAQKLREVLSAEGVIVTRPVTTAAIRISGLDDSLTPEEVAAELARIGECTLEAVKIGEIKSGPSGMGQVLVRLPVAAATKVLAVPKLRVGWSVLRAHLLEAKKLQCFRCHELGHVSARCPSSVDRSRDCYRCGQTGHVASGCSLAPHCAVCASAGRPADHVSGSKACAKSPRPRPRRGASAALEHARRQPGVLRFLQGNLNHSARAQDLLFQSMAEGLTHLAVVAEPYRVPSSPDWAADLEGRVAIIRRCGVGAPPRFDVVERGCGFVAVLWAEVFILGVYFSPNRTLAEFEVFLSELSRVVGRSHSQRILVLGDLNAKSLAWGSSRTCPRGRAVEEWLVGSGLLVLNRGAELTCVRRLGGSVVDVTFATPDVANRVRGWAVMVGEETLSDHRYIRFGVAVPPAESIQGSSLLCGGGAGGPRWAQKRLNVERLCEAAVVQAWRLDSLGEPADVCEGVEHLREAMSRVCDAAMPRIRALAPKRRVHWWTEEIASQRRLCDVSRRAYQRYRRRRRHRDPDEEDRLYEVYRMAIRALRVAIGEAKEAAWNDLLASLDCDPWGRPYRLARNVLRPWAPPATSTLPPETLQRVVGGLFPDFTGTAFVPPVMTTMRVADGGEPADVSQAEFESAVQRMRAKRTAPGPDGISSRAWALALTGDGLGPALRRLFSRCLREGRFPEPWRTGRLVLIPKEGRPRDEPNGYRPIVVLDEAGKLFERVIANRLVQHLENVGPDLAPNQYGFRRGRSTVDAVLRVRHLSDCACSEGGVLLAVSIDIANAFNTIPWSTIVESLRFHRIPNSLRTLIEDYLSGRSVIFPERRGWGRKTVSCGVPQGSVLGPLLWDIGFDWVLRGAGLRGVDVVCYADDTLVTARGADYRTAAILATAAVSTVVSRIRRLGLEVALHKSEAVCFHPVRRGPPPGATLIVGGVSIAVQPKLKYLGIVLDSRWRFDHHFGELIPRLLGMAGALVRLLPNVGGCSVGVRRLYLGVVRSMALYGAPVWSPTLSARNAALLLRAQRALAVRVIRGYRTISREVACALAGSLPWDLEAEVLATVYRRRTQSLGRGRTPGLSAVSRWRRAARHLAYAKWRERLLEELHQTSATRRRTLEALVPVLETWSDRRHGVLSFRLTQVLSGHGCFGRYLWRVCRREPHPGCHQCGHPDDDAQHALEACPRWEHPRRDLIAVLGRDLSLRAVIARMLEDESSWEAMARFCDLVMAFREAEEREREWNPSSAPQRRRRGGRRGHDAPVNLP

Summary

Uniprot
A0A0J7KQK3   A0A0J7KFH2   A0A0J7NFZ0   A0A0J7N0R3   A0A0J7KRB8   A0A0J7KIS5   + More
J9KM84   X1WZ64   X1WJY4   A0A139W939   A0A139W940   A0A139W9B3   A0A139WAH4   X1WXT5   A0A139WNC9   J9LA43   A0A139WN93   J9KNS1  
Pubmed
18362917    19820115   
EMBL
LBMM01004272    KMQ92618.1    LBMM01008278    KMQ89009.1    LBMM01005474    KMQ91485.1    + More
LBMM01012412    KMQ86235.1    LBMM01003988    KMQ92922.1    LBMM01006977    KMQ90149.1    ABLF02018942    ABLF02041885    ABLF02011183    ABLF02041884    ABLF02011238    KQ972691    KXZ75807.1    KXZ75806.1    KQ972544    KXZ75869.1    KQ971388    KYB24913.1    ABLF02004854    ABLF02041317    KQ971310    KYB29500.1    ABLF02018098    KYB29499.1    ABLF02018808   
Proteomes
UP000036403    UP000007819    UP000007266   
Pfam
PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1
PF00098   zf-CCHC
Interpro
IPR001878   Znf_CCHC        + More
IPR036875   Znf_CCHC_sf       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR000477   RT_dom       
IPR000663   Natr_peptide       
SUPFAM
SSF56219   SSF56219        + More
SSF57756   SSF57756       
Gene 3D
3.60.10.10    
ProteinModelPortal
A0A0J7KQK3   A0A0J7KFH2   A0A0J7NFZ0   A0A0J7N0R3   A0A0J7KRB8   A0A0J7KIS5   + More
J9KM84   X1WZ64   X1WJY4   A0A139W939   A0A139W940   A0A139W9B3   A0A139WAH4   X1WXT5   A0A139WNC9   J9LA43   A0A139WN93   J9KNS1  
PDB
1WDU     E-value=2.82783e-08,     Score=145

Ontologies

KEGG
105842185    no KO assigned | (RefSeq) uncharacterized LOC105842185
GO
GO:0008270   GO:0003676   GO:0003964   GO:0005179   GO:0005576   GO:0015074   GO:0003700   GO:0005634   GO:0000287   GO:0003723   GO:0006270   GO:0042555   GO:0048384  

Topology

Length:
1756
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0749700000000001
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00003
outside
1  -  1756
 
 

Population Genetic Test Statistics

Pi
0
Theta
0
Tajima's D
0
CLR
37.9994
CSRT
0
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号