Gene

KWMTBOMO03425

Annotation

PREDICTED:_autophagy-related_protein_16-1-like_[Bombyx_mori]

Location

Bomo_Chr6(+):7636197-7639762      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.465 PlasmaMembrane   Reliability : 1.406

CDS

ATGGCGGCCAAGTTTCTCGGGGAACCGACAAAGGTGATAACAGGGAGTCATGACAGAACGCTAAAAATATGGGACCTTAGAAGTAGAATGTGTACAGAAACAAAATTCGCAGGATCTTCCTGTAATGATCTCGTTACATCTGACGGCGCGGGCTCGACGATAATATCCGGCCATTTCGACAAACGCATCCGATTCTGGGATATACGAACGGAGATGTCGGCGAACCACATAATGCTTCAGGGAAAAGTTACTTCGCTCGATTTAAGTAGAGGTAATTTTGTTTTTGTTTGTTAG

Protein

MAAKFLGEPTKVITGSHDRTLKIWDLRSRMCTETKFAGSSCNDLVTSDGAGSTIISGHFDKRIRFWDIRTEMSANHIMLQGKVTSLDLSRGNFVFVC

Uniprot

A0A212F9A4   A0A194PWW3   A0A194RQ25   A0A2A4JEA2   A0A2H1VQH7   A0A154PBY0   + More
A0A026VYW1   A0A0L7QZX8   A0A3L8E233   A0A195EZG5   K7JRC7   A0A158P3G0   E0VX63   F4X287   E2AW58   A0A0M8ZSZ8   A0A195CFA8   E2BZU9   A0A151WZJ4   A0A195BVH4   A0A232F1A0   A0A2J7RS25   A0A336LQV2   A0A336LMW7   U4UN21   J3JTY6   A0A1W4WCX0   A0A224XWP5   A0A1W4WCW7   A0A0P4VTQ9   T1HKC2   A0A139W912   A0A139W920   A0A336LRV2   A0A0A9YI17   A0A0K8TE66   A0A1I8Q6F7   A0A069DVU7   A0A3Q0J7E7   A0A1B6EJP2   A0A1J1HPL2   A0A2S2QX84   A0A023F367   A0A1B6L4T3   A0A0A9WB29   A0A0A1WSG3   A0A1B6L4T5   A0A034VJC0   A0A146L213   A0A0A9W9Z1   A0A0B8RVB4   A0A1L8DW69   A0A0A9WID1   A0A0A1WJL9   T1PK40   A0A2S2PN53   A0A1I8N4K7   V5HYM0   A0A1I8N4L0   A0A1I8N4L1   A0A0L0CAP4   A0A0K8UUC9   A0A034VLA1   A0A0K8VE23   A0A034VH11   B7P306   Q95TJ1   A0A1W4UC86   W8AFA4   W8BAP9   A0A1W4UR73   A0A1S3HJL5   W8BAQ6   Q9VAF9   A0A0R1E583   A0A2R5LK01   H0RNK4   A0A3B0KVR2   A0A0R1E4N3   A0A1W4UCU0   E4NKN7   A0A1B6CPK6   A0A1W4UPB8   C6TP88   I5AP22   W8ALT2   C3ZEY1   A0A3B0K765   Q297T0   A0A0R3NHF0   B4N9V0   B4G2Z5   A0A0P9ASZ1   B3LWY3   A0A0R3NMH5   A0A0N8P1P3   A0A0P8YGJ1   A0A0P8Y144   A0A293LEH1   A0A0P8Y149  

Pubmed

22118469    26354079    24508170    30249741    20075255    21347285    + More
20566863    21719571    20798317    28648823    23537049    22516182    27129103    18362917    19820115    25401762    26334808    25474469    25830018    25348373    26823975    25315136    25765539    26108605    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24495485    17994087    17550304    15632085    23185243    18563158   

EMBL

AGBW02009607    OWR50336.1    KQ459589    KPI97508.1    KQ459896    KPJ19415.1    + More
NWSH01001856    PCG69904.1    ODYU01003825    SOQ43070.1    KQ434869    KZC09395.1    KK107557    EZA48993.1    KQ414673    KOC64148.1    QOIP01000001    RLU26503.1    KQ981905    KYN33608.1    AAZX01006889    ADTU01007813    ADTU01007814    ADTU01007815    DS235829    EEB17969.1    GL888568    EGI59422.1    GL443246    EFN62337.1    KQ435859    KOX70510.1    KQ977935    KYM98728.1    GL451689    EFN78785.1    KQ982649    KYQ53121.1    KQ976403    KYM92265.1    NNAY01001268    OXU24556.1    NEVH01000595    PNF43634.1    UFQT01000065    SSX19291.1    SSX19290.1    KB632290    ERL91566.1    BT126696    AEE61658.1    GFTR01003506    JAW12920.1    GDKW01001232    JAI55363.1    ACPB03011894    KQ972776    KXZ75778.1    KXZ75779.1    SSX19289.1    GBHO01012856    JAG30748.1    GBRD01001944    JAG63877.1    GBGD01001072    JAC87817.1    GECZ01031667    JAS38102.1    CVRI01000012    CRK89332.1    GGMS01013176    MBY82379.1    GBBI01002867    JAC15845.1    GEBQ01021248    JAT18729.1    GBHO01039013    JAG04591.1    GBXI01015031    GBXI01012842    JAC99260.1    JAD01450.1    GEBQ01021238    JAT18739.1    GAKP01016358    JAC42594.1    GDHC01016035    JAQ02594.1    GBHO01039015    JAG04589.1    GBRD01001946    JAG63875.1    GFDF01003421    JAV10663.1    GBHO01039014    JAG04590.1    GBXI01015684    JAC98607.1    KA648328    AFP62957.1    GGMR01018216    MBY30835.1    GANP01002851    JAB81617.1    JRES01000660    KNC29473.1    GDHF01022181    JAI30133.1    GAKP01016357    JAC42595.1    GDHF01015193    JAI37121.1    GAKP01016356    JAC42596.1    ABJB010169700    ABJB010175465    ABJB010477262    ABJB010589239    ABJB010603471    ABJB010703053    ABJB010746558    ABJB010782192    ABJB010929067    DS625605    EEC00978.1    AE014297    AY058742    AAF56951.3    AAL13971.1    GAMC01019635    GAMC01019633    JAB86920.1    GAMC01019636    JAB86919.1    GAMC01019637    GAMC01019631    JAB86924.1    AAF56950.3    CM000160    KRK04174.1    KRK04175.1    GGLE01005747    MBY09873.1    BT132926    AEW12898.1    OUUW01000041    SPP89956.1    KRK04173.1    BT125834    ADR83719.1    GEDC01021940    JAS15358.1    BT099574    ACU43536.1    CM000070    EIM52707.2    KRT00478.1    KRT00480.1    GAMC01019638    JAB86917.1    GG666612    EEN49287.1    SPP89955.1    EAL28125.3    KRT00481.1    CH964232    EDW80665.2    CH479179    EDW24190.1    CH902617    KPU80487.1    EDV43822.1    KRT00477.1    KPU80484.1    KPU80485.1    KPU80486.1    GFWV01002403    MAA27133.1    KPU80488.1   

Proteomes

UP000007151    UP000053268    UP000053240    UP000218220    UP000076502    UP000053097    + More
UP000053825    UP000279307    UP000078541    UP000002358    UP000005205    UP000009046    UP000007755    UP000000311    UP000053105    UP000078542    UP000008237    UP000075809    UP000078540    UP000215335    UP000235965    UP000030742    UP000192223    UP000015103    UP000007266    UP000095300    UP000079169    UP000183832    UP000095301    UP000037069    UP000001555    UP000000803    UP000192221    UP000085678    UP000002282    UP000268350    UP000001819    UP000001554    UP000007798    UP000008744    UP000007801   

PRIDE

V5HYM0    Q95TJ1    Q9VAF9    H0RNK4   

Pfam

PF00400   WD40        + More
PF08614   ATG16
PF12894   ANAPC4_WD40

Interpro

IPR020472   G-protein_beta_WD-40_rep        + More
IPR036322   WD40_repeat_dom_sf       
IPR019775   WD40_repeat_CS       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR001680   WD40_repeat       
IPR017986   WD40_repeat_dom       
IPR013923   Autophagy-rel_prot_16       
IPR024977   Apc4_WD40_dom       

SUPFAM

SSF50978   SSF50978       

Gene 3D

2.130.10.10    

ProteinModelPortal

A0A212F9A4   A0A194PWW3   A0A194RQ25   A0A2A4JEA2   A0A2H1VQH7   A0A154PBY0   + More
A0A026VYW1   A0A0L7QZX8   A0A3L8E233   A0A195EZG5   K7JRC7   A0A158P3G0   E0VX63   F4X287   E2AW58   A0A0M8ZSZ8   A0A195CFA8   E2BZU9   A0A151WZJ4   A0A195BVH4   A0A232F1A0   A0A2J7RS25   A0A336LQV2   A0A336LMW7   U4UN21   J3JTY6   A0A1W4WCX0   A0A224XWP5   A0A1W4WCW7   A0A0P4VTQ9   T1HKC2   A0A139W912   A0A139W920   A0A336LRV2   A0A0A9YI17   A0A0K8TE66   A0A1I8Q6F7   A0A069DVU7   A0A3Q0J7E7   A0A1B6EJP2   A0A1J1HPL2   A0A2S2QX84   A0A023F367   A0A1B6L4T3   A0A0A9WB29   A0A0A1WSG3   A0A1B6L4T5   A0A034VJC0   A0A146L213   A0A0A9W9Z1   A0A0B8RVB4   A0A1L8DW69   A0A0A9WID1   A0A0A1WJL9   T1PK40   A0A2S2PN53   A0A1I8N4K7   V5HYM0   A0A1I8N4L0   A0A1I8N4L1   A0A0L0CAP4   A0A0K8UUC9   A0A034VLA1   A0A0K8VE23   A0A034VH11   B7P306   Q95TJ1   A0A1W4UC86   W8AFA4   W8BAP9   A0A1W4UR73   A0A1S3HJL5   W8BAQ6   Q9VAF9   A0A0R1E583   A0A2R5LK01   H0RNK4   A0A3B0KVR2   A0A0R1E4N3   A0A1W4UCU0   E4NKN7   A0A1B6CPK6   A0A1W4UPB8   C6TP88   I5AP22   W8ALT2   C3ZEY1   A0A3B0K765   Q297T0   A0A0R3NHF0   B4N9V0   B4G2Z5   A0A0P9ASZ1   B3LWY3   A0A0R3NMH5   A0A0N8P1P3   A0A0P8YGJ1   A0A0P8Y144   A0A293LEH1   A0A0P8Y149  

PDB

5NUV     E-value=3.34685e-24,     Score=270

KEGG

101744668    K17890 autophagy-related protein 16-1 | (RefSeq) autophagy-related protein 16-1-like

GO

GO:0000045   GO:0000421   GO:0016905   GO:0016236   GO:0010506   GO:0061723   GO:0009267   GO:0006914   GO:0035096   GO:0034274   GO:0035883   GO:0006497   GO:0060786   GO:0005515   GO:0008152   GO:0015074   GO:0003700   GO:0005634   GO:0000287   GO:0003723   GO:0006270   GO:0042555   GO:0048384  

Length:

97

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00267

Exp number, first 60 AAs:

0.00206

Total prob of N-in:

0.09815

outside

1  -  97

 

 

Pi

268.958768

Theta

190.454614

Tajima's D

1.031613

CLR

0

CSRT

0.668066596670167

Interpretation

Uncertain