SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03424  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006371
Annotation
Uncharacterized_protein_OBRU01_01696_[Operophtera_brumata]
Location in the cell
Extracellular   Reliability : 1.722 Nuclear   Reliability : 1.264
 

Sequence

CDS
ATGTTGCCACGGCCCCTCTCAGCGAGTACAATGCGGATTTTATTCAGTTTAGTGCTGGTAGCGTGCGCGGTCGACGCCGCAAAAAAGTTCGAGGGAACTTTGAGATCGGCAGCCGAGGCCCCACAAGAGGACAACTTAGCTATCGAATCTGCTTCTGCCGAACCGGCGGTTGTTGCTGCACCTCAAGACTATCAAAATCCTGGCGCTCCACCTCCTCCTAAAGATGAATTAGAATCTGAAGAACCCGCTGAAGAGCCTGCTGCTGTTCCCGAAACCGCATCCGAAGGAATACCACCGTCAGCTCCCAGTGGCGCTTCTGCACCATCGGCACCAGCTAATTCATTAGAAGAATGTGACCCCGAAATGATTGGCTTCGAATTAGTGACGGGGTACGTGTTCTCGGCGCCATCGCAAATTTTAGATGACATCCCCGGCACGCTGATGCTGACCGACTGCCTCGAGCAATGCCATGCTAACGACACCTGTCGCGCCGTAAATTACGAGACGGGACTTTGTGTGCTTTTCAGTTCTGATGCCGACCAACTGCCTGGTGCATTGACGAAATCGCAGTTCCCCGTATTCACTATATACGCTCAAAAATCTTGTTTGGGAGTTCGTCCGTGCGAACGCGCCTGGTGCTTCGATAGAGTGCGAGGCTACCACCTCAAGGGGCACGGCAAGAAAACACACACCGTTGGATCTCGGCAGATGTGCCTTGACCTTTGTCTCGGCGAAAACGAATTTGTTTGCAGATCTGCGAACTATAACAATAAAACCGGCGAGTGTGTGCTCTCTAACATGGACCGTATCACCTTGGCGGGAACCAACGCTTTTCAATCAAACGAAGACACCGACTATTTGGAGAACAACTGCGTTGAAGAGCCAACAAAATTGTGCGAGTTTAAAAAAATGGGTGGACGTATTCTTAAGACTGTTGATTCCGTATATCAAGACGTGCAGACTATTGAAGAATGCCGAGAACTTTGTCTAAATTCGCCTTTCCGTTGTCACTCATATGATCACGGTGATACTGGTGACCACGTCTGTCGTCTCTCTCATCACTCTCGGGCTACACTCGCTGATATCCAGGATCCTTATTTGGAAGTTCCCGAAGCAGCCACTTACGAACTGTCATCCTGTTACAACGTATCCATTGACTGTCGTGCTGGTGACATGGTTGCCAAAATTCAAACATCCAAATTGTTTGACGGCAAAATCTATGCTAAAGGAAGTCCAAACTCTTGCGTCGTAGATGTCAAACAGAGTCTTGAGTTTGAACTGCACATGGGTTATAACAATATCGAATGTAATGTTAAACAAAACGGACTTGGAAGGTATTTAAATGACGTTGTTATTCAACACCACGACACAATCGTAACTTCGTCTGATCTTGGTTTAGCGGTTACTTGTCAGTATGATTTGACAAACAAGACTGTTGCCAATGAAGTCGATCTTGGAATTCACGGAGACATTCAAACTGGTCTGTCCGAGGAAGTTATTGTAGACTCACCCAACGTAGCGATGAGAATCACAGACAGGAGTGGTGACGATACTATTGCTTCCGCTGAAGTTGGAGATCCATTGGCTCTCCGATTTGAAATTATGGATCCCAACTCACCATTCGAGATCTTCGTGCGAGAACTTGTTGCCATGGATGGTGTTGACTCCAGCGAAATCACGCTTATCGACAGCGATGGTTGCCCTACAGAACATTTTATCATGGGGCCACTATTCAAGTCCACTTTAAGCGGAAAGACGCTGCTATCACATTTCGACGCCTTCAAATTCCCTTCGTCAGAAGTTGTGCAATTCCGTGCCTTGGTGACTCCTTGTATGCCTACTTGCGAACCAGTGCAATGTGATGGCGGTCCGAATGAATTACGTTCAGTAATGTCATACGGTCGTAGGAAGAGGCGTTCTACATCTGCTACACCTACAGATGATATGCTTCTCGTGCAGACCATCCAGATTACTGATAAATTCGGATTCGACAAACAACGTGCTAAGAATGTCACAGAGGATGCAGTATATGTAAGAGAGACCGACGGAACTTGTGTGAATGCTTCAGGAGCCATGCTAGCTGCGGCCGCTTTCTTGGCAGCTCAACTAGTAGTACTTGCAGCGTGGACCTGCAGTTGGCAACGAAGACGTGCTGCTGCAAAAGCTGCCGAACTTCTTCCAGGCCCTAACGCACCCTCATCGCTGTGCAAGGTCTACGATGCGAGCTTCCCTCGTGCACATCAGAGGCACTTTTGA
Protein
MLPRPLSASTMRILFSLVLVACAVDAAKKFEGTLRSAAEAPQEDNLAIESASAEPAVVAAPQDYQNPGAPPPPKDELESEEPAEEPAAVPETASEGIPPSAPSGASAPSAPANSLEECDPEMIGFELVTGYVFSAPSQILDDIPGTLMLTDCLEQCHANDTCRAVNYETGLCVLFSSDADQLPGALTKSQFPVFTIYAQKSCLGVRPCERAWCFDRVRGYHLKGHGKKTHTVGSRQMCLDLCLGENEFVCRSANYNNKTGECVLSNMDRITLAGTNAFQSNEDTDYLENNCVEEPTKLCEFKKMGGRILKTVDSVYQDVQTIEECRELCLNSPFRCHSYDHGDTGDHVCRLSHHSRATLADIQDPYLEVPEAATYELSSCYNVSIDCRAGDMVAKIQTSKLFDGKIYAKGSPNSCVVDVKQSLEFELHMGYNNIECNVKQNGLGRYLNDVVIQHHDTIVTSSDLGLAVTCQYDLTNKTVANEVDLGIHGDIQTGLSEEVIVDSPNVAMRITDRSGDDTIASAEVGDPLALRFEIMDPNSPFEIFVRELVAMDGVDSSEITLIDSDGCPTEHFIMGPLFKSTLSGKTLLSHFDAFKFPSSEVVQFRALVTPCMPTCEPVQCDGGPNELRSVMSYGRRKRRSTSATPTDDMLLVQTIQITDKFGFDKQRAKNVTEDAVYVRETDGTCVNASGAMLAAAAFLAAQLVVLAAWTCSWQRRRAAAKAAELLPGPNAPSSLCKVYDASFPRAHQRHF

Summary

EMBL
NWSH01002817    PCG67485.1    ODYU01003825    SOQ43068.1    BABH01009281    JTDY01000100    + More
KOB78868.1    AK401110    BAM17732.1    AK402326    BAM18948.1    KQ459589    KPI97509.1    KQ459896    KPJ19413.1    AGBW02009607    OWR50334.1    GEZM01083953    JAV60912.1    KQ971326    EFA00860.1    CH477449    EAT40707.1    ADTU01007829    ADTU01007830    ADTU01007831    ADTU01007832    ADTU01007833    ADTU01007834    ADTU01007835    ADTU01007836    ADTU01007837    ADTU01007838    KQ981905    KYN33615.1    AAAB01008859    EAA07511.5    GBYB01010278    GBYB01014249    JAG80045.1    JAG84016.1    ATLV01015531    ATLV01015532    ATLV01015533    ATLV01015534    KE525019    KFB40481.1    AAZX01001573    AAZX01005707    AAZX01006495    AAZX01013344    AAZX01017096    ABLF02031505    CH964232    EDW80666.1    GAMC01017048    JAB89507.1    CH940648    EDW62094.2    GGMS01016198    MBY85401.1    CVRI01000012    CRK89336.1    CH933808    EDW09531.2    KRG04726.1    CH916373    EDV94706.1    GAKP01019915    JAC39037.1    GDHF01019640    JAI32674.1    EDW80664.2    CM000160    EDW98242.1    CH480819    EDW53415.1    CH902617    EDV43821.1    CM000364    EDX14907.1    CH954182    EDV53173.1    AE014297    AY094725    AAF56948.1    AAM11078.1    AAS65226.1    CP012526    ALC46615.1    EDW62095.1    OUUW01000041    SPP89953.1    SPP89952.1    CH479186    EDW39387.1    ALC47847.1    CH933806    EDW16482.1    EDW09532.2    EDV43565.1    CH964272    EDW83725.1    CH940650    EDW67749.1    BT133074    AAF57159.2    AAN14274.2    AEX93159.1    EDX15129.1    CH480846    EDW50954.1    CH916369    EDV93617.1    OUUW01000005    SPP81125.1    BT001629    AAN71384.1    EDV52948.1    EDV94507.1    CM000070    EDY67640.2    CH479198    EDW27967.1    GDHF01032845    JAI19469.1    EDW99228.2    GAKP01019885    JAC39067.1    ACPB03011908    GBXI01007169    JAD07123.1    GDHF01028188    JAI24126.1    AJWK01023972    JXJN01005607    EDV94508.1    EDW67748.2    EDW83728.1    EDV43564.2    AAF57158.3    AHN57621.1    EDV52949.1    EDX15128.1    EDY67639.1    EDW99227.1    EDW53640.1    SPP81127.1    SPP81128.1    EDW16484.2    JRES01001677    KNC21006.1    CCAG010009783    ALC47846.1    GAKP01019919    GAKP01019916    JAC39033.1    GDIQ01011800    JAN82937.1    LRGB01001036    KZS13641.1    GDIQ01070787    JAN23950.1   
Pfam
PF00024   PAN_1        + More
PF00100   Zona_pellucida
Interpro
IPR001507   ZP_dom        + More
IPR003609   Pan_app       

Ontologies

Topology

SignalP
Position:   1 - 26,         Likelihood:  0.957163
 
 
Length:
751
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.57657
Exp number, first 60 AAs:
1.15751
Total prob of N-in:
0.06205
outside
1  -  690
TMhelix
691  -  713
inside
714  -  751
 
 

Population Genetic Test Statistics

Pi
201.860551
Theta
194.305977
Tajima's D
0.224708
CLR
0.585843
CSRT
0.43892805359732
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
27102218 SCIGVRPCER 100.00 7e-05
29197581 EIVAMDGVDSSEITIIDSDGCPTEHFIMGPIFK 100.00 7e-05
29197581 AVNYETGICVIFSSDADQIPGAITK 100.00 1e-04
27102218 EICINSPFR 100.00 5e-04
29197581 TVANEVDIGIHGDIQTGISEEVIVDSPNVAMR 100.00 5e-04
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