Silkworm Genome Informatics Database

Gene

KWMTBOMO03422 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014287

Annotation

PREDICTED:_4-coumarate--CoA_ligase_1-like_[Amyelois_transitella]

Location

Bomo_Chr6(+):7460637-7469213 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 2.857

CDS

ATGTTGGAGCATATCCGACAGTGGAATGACCAAATTGCAATAGAAAATGCTGATACAGGTGAAAAACTATCGTACAAAGAAATCGCACAGTATGTTGTGAACCTTTCCGCGTCTTTGACGAGCCTTGGGGTCGGAAGAGGTGATACAGTGGCACTCGGGTCGGAAAAACACAATGAATTTGTTCCGACTTTGCTTGCAATTGTATTGACTGGAGCCACCTATACACCTTACGATTTGAAAGTTGGAAAAGCCTCGTTAAAACACAAACTAAGTGTAGTGAAACCTAAATATTTTATTTATTCAAATAAGTTTTGGTTGACGTACAGCGACGTCTTAAAGAGTTTTGACTGCATACAAACGTACTTCACTCTGGAAGACAACAGCGAGGGTGTGGTTTCCATAAAAAGCTTAGCATCCAAATATGTCGATGTGGATCTGTTTGAACCGACGCCGGTTCAAGGACAAATAGATACAGCAGCTGTATTATATTCATCAGGAACTACTGGTATGCCGAAAGGAGTTCAATTAACTCACTTGAATTGTATACTAAGCAGTCTACCTTCTAATTTCAGCTACGAATCTCTGCAGACTGTTTTCATTTTTGGTGTATGGTATCATAATTACGATACATTTATGACGTATAAATTTTTAACGAAGGGGAAGAAAATTGTTTACGTGGATAATCCGACCCCAATTGCGATTCTTAAAACCATTGAACTTATGAAGGTTAACATTGGATTTGTCGTGCCATCTTTTTTCCATTATATTTCGAAAAATGATGAAGTAAAAAATTACAATTTAGATTCTCTGAAAATAATTTATTCACGCGCAAGCCCTCTTCATATTAAGACCATGGAAAAAGTGAAAGAAAGATTACCGAAATTAAATTACATAATTCAAGGATATGGGATGACAGAAGCTGGAGAATTAAGTTCAGAGTGCTGGGGCGATAAAGGAACTAAACTCGGGAGTGTTGGCAAGACTACACCTGGCCTTATACTAAAGGTTGTAGATCCCGAAACCCGTCAAGTACTGGGCGCAAATCGTCGTGGCGAAATTTGCCTTAAAGGACCTGTTTTTATGAAGGGTTACATAGGAGTAGACCCTTCAATTTACCTAGACGAGGAAGGTTTCTTCAGAACGGGGGACTTAGGTTATTACGACGAAGACAAATACTTTTACATTGTCGATAGATTAAAGGAAATTATTTCATATCAAGGACACCAGGTTCCACCCACGGAACTAGAGACTGTCCTGTTACTCCATCCTGCAGTGAAAGAGGCGGGTGTGGTCGGAAAACCTCATCCAGAGGACGATGAACTGCCAACAGCTTTTATAGTAAAGCGCCCAGGATTTAATGTTACCGAACAGGAGTTAATTGATTTTGTGGTTGCAGAAGTTCCACCATATATGGAATTAAAAGGTGGTATTCGATTTATAAATGAATTACCAAGAAACCCTAGAGGCAAAATATTAAGAAGAACTCTTCGCGATATGCTTTTGAAAGAACAGTGGAAAGGAGCGAAAGCTAGAGAAATTGGTGAAGGATATAAGCTGTATTATAGTGGAAGTGATGGAAGAAGGAATGGCGTGGGAGTAGTGTTAGATAAGGATTTGAAAGATTGTGTGGCGCATGTCATAAGAACGAGTGATAGGATAATAACCGTAAAAATAGTTTGTGAAAGTGTTATTTTGAATGTTATAAGTGTGTACGCGCCTCAGTCCGGGTGCAAGGAGCACGTGAAAGAGAAATTTTGGCAGGATTTTGATAGTGTTATGATTCGCATTCCAGAGAGTGAAGAGATTTGTATAGGAGGTGATTTTAATGGACATGTAGGAGCTACAAATGAGGGCTATGAAAGGGTGCATGGAGGGTGGGGGTATGGCAATCGTAATGATGATGGAGACCAGTTGCTCCAAGCTGCGACCACCTTTAACCTGGCAGTGGCGAATACGTGGTTCCAGAAACGGCCTGAACACCTTATCACCTATAAGAGTGGTAAACACGCGACACAGATCGACTACTTTCTGATTAAGAGAAGTAAGTTGGTATGTGTCAAAAACTGCAAAGTACTGCCGGGTGAAGCATTGGTGACGCAGCATAGACTGTTACTAATGGACATTACAATCAGTTACAAGTACCTAAGGAGGAAAAACCGTCTCTCGTCAAAAATTAGATGGCGTATGCTAGAGACAGATGAGTATGCTGGTCGATTTAGGGAAATAATGATAGAAAACATCTTGGAAATGAAGGATATGAAAGAGAAATCTGCGAATGATTGTTGGGATGAAATGGCAAATAGTGTCAGGAAGACAGCTAAGGCTGTGCTCGGCGAATCAAAAGGGAAAGGTATAATTGACAAGGATACATGGTGGTGGAATGAGAATGTACAGAGAGAATTGAAAGAAAAGAAGAATGCATTCAAAAAGTGGCAACTAGAAAGAGGTAATGAAAGTGAGAGGCAAGCTAGGAAGAATGAGTATAGAGAATGTAAGAAAAAGGCCACTAAAGCAGTTGCTATAGCCAGCTAG

Protein

MLEHIRQWNDQIAIENADTGEKLSYKEIAQYVVNLSASLTSLGVGRGDTVALGSEKHNEFVPTLLAIVLTGATYTPYDLKVGKASLKHKLSVVKPKYFIYSNKFWLTYSDVLKSFDCIQTYFTLEDNSEGVVSIKSLASKYVDVDLFEPTPVQGQIDTAAVLYSSGTTGMPKGVQLTHLNCILSSLPSNFSYESLQTVFIFGVWYHNYDTFMTYKFLTKGKKIVYVDNPTPIAILKTIELMKVNIGFVVPSFFHYISKNDEVKNYNLDSLKIIYSRASPLHIKTMEKVKERLPKLNYIIQGYGMTEAGELSSECWGDKGTKLGSVGKTTPGLILKVVDPETRQVLGANRRGEICLKGPVFMKGYIGVDPSIYLDEEGFFRTGDLGYYDEDKYFYIVDRLKEIISYQGHQVPPTELETVLLLHPAVKEAGVVGKPHPEDDELPTAFIVKRPGFNVTEQELIDFVVAEVPPYMELKGGIRFINELPRNPRGKILRRTLRDMLLKEQWKGAKAREIGEGYKLYYSGSDGRRNGVGVVLDKDLKDCVAHVIRTSDRIITVKIVCESVILNVISVYAPQSGCKEHVKEKFWQDFDSVMIRIPESEEICIGGDFNGHVGATNEGYERVHGGWGYGNRNDDGDQLLQAATTFNLAVANTWFQKRPEHLITYKSGKHATQIDYFLIKRSKLVCVKNCKVLPGEALVTQHRLLLMDITISYKYLRRKNRLSSKIRWRMLETDEYAGRFREIMIENILEMKDMKEKSANDCWDEMANSVRKTAKAVLGESKGKGIIDKDTWWWNENVQRELKEKKNAFKKWQLERGNESERQARKNEYRECKKKATKAVAIAS

Uniprot

NA

ProteinModelPortal

NA

PDB

2D1S E-value=2.55906e-74, Score=712

KEGG

101740569 no KO assigned | (RefSeq) luciferin 4-monooxygenase

GO

GO:0003824 GO:0008152 GO:0015074 GO:0003700 GO:0005634 GO:0000287 GO:0003723 GO:0006270 GO:0042555 GO:0048384

Length:

843

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.33057

Exp number, first 60 AAs:

0.05097

Total prob of N-in:

0.01505

outside

1 - 843

Pi

163.051432

Theta

213.982532

Tajima's D

-0.820543

CLR

1569.621251

CSRT

0.170241487925604

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
31250652	LIFLVFRYEHQEIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFDIASDAFSTFKVFFLF	98.18	3e-31
31250652	VTDVVLETEFDGER	100.00	3e-12
27102218	IGSVGK	95.45	4e-09
27102218	GYIGVDPSIYIDEEGFFR	100.00	7e-05

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree