Gene

KWMTBOMO03418

Pre Gene Modal

BGIBMGA006503

Annotation

PREDICTED:_lachesin-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr6(+):7414397-7423615      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.64 PlasmaMembrane   Reliability : 1.684

CDS

ATGAGCAAATACGGTCGTGAGTTACCTAGTGGGCAGAATGTTGTCTCAGTAGCACCTATAGAAGTTCCAGACGAATCAATGTACCCAAGATTCGCGGAGCCCATACCGAATGTCACGGTCACTATTGGCCGCGACGCTCTGTTGGCGTGCGTCGTTGAGAACCTGAGAGGTTTTAAGGTGGCATGGGTGCGAATGGACACCCAAACTATTCTAAGTATTCATCACAATATAATAACGCAGAATTCTCGCATCAGCCTGTCTTATAACGACCACCGTTCGTGGTACCTGCACATTAAAAACGTTCAGGAGGTCGATCGCGGTTGGTACATGTGCCAGGTTAACACGGACCCGATGCATTTTAGAAAAGGCTACTTGCAAGTCGTAGTTCCACCATCAATCATCGATAATATGACGTCAACGGATATGGTGGTCCGGGAGAGTTCAGACGTGACCTTAGTTTGTCGTGCATCCGGGTATCCGGAGCCTTACGTCATGTGGAGGAGGGAAGATGGACAAGATTTCACTTACAACGGAGAATCAGTAAGTGTTGTTGACGGAGAAACGTTGACAATAACGAAGGTGTCTCGATTACATATGGGCGCCTACCTGTGCATCGCCTCTAATGGCGTGCCACCTTCAATTAGCAAGAGAATTATGCTCATGGTACAATTTCCGCCGATGCTTTCGATTCCCAATCAACTGGAAGGAGCGTACATAGGCCAGGATGTAACGTTAGAATGCCACACAGAAGCGTATCCATCTTCAATTAACTATTGGACAACAGATCGAGGGGATATGATCATTTCTGGTGGAAAATACGAAGCGTTCCCGATGGACAACGGTTACAGCAAATTTATGATGCTTAAAATACGAAACATAACTAAGGAAGATTTTGGATTCTACAAATGTATTGCAAAGAATTCACTAGGAGAGACCGATGGCATCATTAAGCTGGATGAAATTCCAGCGCCGCCGTCAGCGTTTACAACACAAAGAACTGTGTTAGATAATCAAACAATAAGGAAAAAAGGCGATGCACAAATCATTCAAAACAGTGACGCAATCACTTCAAATTTTCAAGGGGAGGCTTATGGAGAGCAAATTAGGGACTTTGATTTTGATGACGACGACAGCGCAAGCAACGATCTCCATTCAAACAGCCTATTATTTACCCTAATAGTTGGACTTGTATTACTCAAAGTTTTTAGGCAAAGTATACTTTCTTGA

Protein

MSKYGRELPSGQNVVSVAPIEVPDESMYPRFAEPIPNVTVTIGRDALLACVVENLRGFKVAWVRMDTQTILSIHHNIITQNSRISLSYNDHRSWYLHIKNVQEVDRGWYMCQVNTDPMHFRKGYLQVVVPPSIIDNMTSTDMVVRESSDVTLVCRASGYPEPYVMWRREDGQDFTYNGESVSVVDGETLTITKVSRLHMGAYLCIASNGVPPSISKRIMLMVQFPPMLSIPNQLEGAYIGQDVTLECHTEAYPSSINYWTTDRGDMIISGGKYEAFPMDNGYSKFMMLKIRNITKEDFGFYKCIAKNSLGETDGIIKLDEIPAPPSAFTTQRTVLDNQTIRKKGDAQIIQNSDAITSNFQGEAYGEQIRDFDFDDDDSASNDLHSNSLLFTLIVGLVLLKVFRQSILS

Uniprot

A0A194Q304   A0A194RTG6   H9JAF8   A0A146LH66   A0A023F4V5   A0A2A4J3T6   + More
A0A146MA51   A0A3Q0J8E8   A0A139WMP7   A0A1B6CRI0   A0A1B6J1W7   A0A212EKA1   D6W8T8   H9JA27   A0A139WMS5   A0A3L8E4Q5   A0A026WAB6   A0A0A9XI90   A0A0K8T337   A0A146KK58   A0A151WZH5   A0A2S2QH63   A0A195BW86   J9JZN3   A0A0K8T3P7   A0A0A9XQI0   A0A195EIX3   A0A195D642   A0A146MGR1   A0A158P395   A0A2S2NNN0   A0A1S4GZZ7   A0A195F5V6   A0A088AQT0   B4KIR3   B4JP63   A0A154P4H3   B4N0B5   A0A2H8TG58   A0A1I8M262   A0A0C9RGF3   B4M9Q9   A0A1A9X2A9   A0A1A9ZHU6   A0A336LZ41   A0A0P9A7F1   A0A0R3NQJ6   A0A1W4V7R8   X2J5Z1   A0A0J9R1K5   B3MV45   A0A1A9X8Z5   Q29PB2   A0A3B0JIW5   A0A0C9QXP8   A0A1W4V797   B4Q545   A0A0R1DKD6   B3NAE9   B4IEP8   Q8IP70   B4P3N8   K7J2A2   A0A1B0FMB0   A0A232ET04   A0A1J1I230   A0A182KWN5   A0A2J7QVC7   A0A2S2QG06   A0A2S2N9P3   A0A2H8TP39   A0A2H8TEI3   A0A0P5NUT0   A0A164NFU9   A0A0P5R0R2   A0A0N8E0E1   A0A0P6AMJ1   E9H1U1   A0A0P6EB83   A0A182VSY0   A0A139WMQ5   A0A084WD23   A0A182N8R0   D6W8U0   A0A1S4H3E1   A0A182QF62  

Pubmed

26354079    19121390    26823975    25474469    18362917    19820115    + More
22118469    30249741    24508170    25401762    21347285    12364791    17994087    25315136    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    22936249    17550304    18057021    26109357    26109356    20075255    28648823    20966253    21292972    24438588   

EMBL

KQ459551    KPI99921.1    KQ459896    KPJ19411.1    BABH01009272    GDHC01011924    + More
JAQ06705.1    GBBI01002206    JAC16506.1    NWSH01003607    PCG66063.1    GDHC01002707    JAQ15922.1    KQ971312    KYB29126.1    GEDC01021485    JAS15813.1    GECU01014531    JAS93175.1    AGBW02014276    OWR41942.1    EEZ98396.2    BABH01009265    KYB29125.1    QOIP01000001    RLU27443.1    KK107304    EZA52923.1    GBHO01024243    GBRD01006009    JAG19361.1    JAG59812.1    GBRD01006010    JAG59811.1    GDHC01021648    JAP96980.1    KQ982649    KYQ53167.1    GGMS01007863    MBY77066.1    KQ976403    KYM92226.1    ABLF02040116    ABLF02040120    GBRD01006011    JAG59810.1    GBHO01024244    GBRD01006008    JAG19360.1    JAG59813.1    KQ978801    KYN28203.1    KQ976842    KYN07899.1    GDHC01000502    JAQ18127.1    ADTU01007920    ADTU01007921    ADTU01007922    ADTU01007923    ADTU01007924    ADTU01007925    ADTU01007926    ADTU01007927    ADTU01007928    GGMR01006181    MBY18800.1    AAAB01008944    KQ981805    KYN35454.1    CH933807    EDW12419.2    CH916372    EDV99488.1    KQ434804    KZC06020.1    CH963920    EDW77528.2    GFXV01001260    MBW13065.1    GBYB01007435    JAG77202.1    CH940654    EDW57935.2    UFQT01000047    SSX18948.1    CH902624    KPU74306.1    CH379058    KRT03441.1    AE014134    AHN54418.1    CM002910    KMY90142.1    EDV33110.1    EAL34381.2    OUUW01000006    SPP82317.1    GBYB01005452    JAG75219.1    CM000361    EDX04951.1    KMY90141.1    CM000157    KRJ97706.1    CH954177    EDV58651.1    KQS70467.1    KQS70468.1    CH480831    EDW46075.1    BT010243    AAN10840.1    AAQ23561.1    EDW88339.1    KRJ97704.1    KRJ97705.1    KRJ97707.1    KRJ97708.1    AAZX01001585    AAZX01004052    AAZX01008048    CCAG010002011    CCAG010002012    CCAG010002013    NNAY01002356    OXU21481.1    CVRI01000038    CRK94267.1    NEVH01010477    PNF32521.1    GGMS01007482    MBY76685.1    GGMR01001043    MBY13662.1    GFXV01004110    MBW15915.1    GFXV01000712    MBW12517.1    GDIQ01137430    JAL14296.1    LRGB01002860    KZS05919.1    GDIQ01107432    JAL44294.1    GDIQ01074140    JAN20597.1    GDIP01027146    JAM76569.1    GL732584    EFX74233.1    GDIQ01065249    JAN29488.1    KYB29127.1    ATLV01022922    ATLV01022923    KE525338    KFB48117.1    EEZ98398.2    AAAB01008980    AXCN02001860    AXCN02001861   

Proteomes

UP000053268    UP000053240    UP000005204    UP000218220    UP000079169    UP000007266    + More
UP000007151    UP000279307    UP000053097    UP000075809    UP000078540    UP000007819    UP000078492    UP000078542    UP000005205    UP000078541    UP000005203    UP000009192    UP000001070    UP000076502    UP000007798    UP000095301    UP000008792    UP000091820    UP000092445    UP000007801    UP000001819    UP000192221    UP000000803    UP000092443    UP000268350    UP000000304    UP000002282    UP000008711    UP000001292    UP000002358    UP000092444    UP000215335    UP000183832    UP000075882    UP000235965    UP000076858    UP000000305    UP000075920    UP000030765    UP000075884    UP000075886   

PRIDE

H9JAF8    H9JA27    X2J5Z1   

Pfam

PF07679   I-set        + More
PF00047   ig
PF07686   V-set

Interpro

IPR007110   Ig-like_dom        + More
IPR003598   Ig_sub2       
IPR036179   Ig-like_dom_sf       
IPR003599   Ig_sub       
IPR013783   Ig-like_fold       
IPR013098   Ig_I-set       
IPR013151   Immunoglobulin       
IPR013106   Ig_V-set       

SUPFAM

SSF48726   SSF48726       

Gene 3D

2.60.40.10    

ProteinModelPortal

A0A194Q304   A0A194RTG6   H9JAF8   A0A146LH66   A0A023F4V5   A0A2A4J3T6   + More
A0A146MA51   A0A3Q0J8E8   A0A139WMP7   A0A1B6CRI0   A0A1B6J1W7   A0A212EKA1   D6W8T8   H9JA27   A0A139WMS5   A0A3L8E4Q5   A0A026WAB6   A0A0A9XI90   A0A0K8T337   A0A146KK58   A0A151WZH5   A0A2S2QH63   A0A195BW86   J9JZN3   A0A0K8T3P7   A0A0A9XQI0   A0A195EIX3   A0A195D642   A0A146MGR1   A0A158P395   A0A2S2NNN0   A0A1S4GZZ7   A0A195F5V6   A0A088AQT0   B4KIR3   B4JP63   A0A154P4H3   B4N0B5   A0A2H8TG58   A0A1I8M262   A0A0C9RGF3   B4M9Q9   A0A1A9X2A9   A0A1A9ZHU6   A0A336LZ41   A0A0P9A7F1   A0A0R3NQJ6   A0A1W4V7R8   X2J5Z1   A0A0J9R1K5   B3MV45   A0A1A9X8Z5   Q29PB2   A0A3B0JIW5   A0A0C9QXP8   A0A1W4V797   B4Q545   A0A0R1DKD6   B3NAE9   B4IEP8   Q8IP70   B4P3N8   K7J2A2   A0A1B0FMB0   A0A232ET04   A0A1J1I230   A0A182KWN5   A0A2J7QVC7   A0A2S2QG06   A0A2S2N9P3   A0A2H8TP39   A0A2H8TEI3   A0A0P5NUT0   A0A164NFU9   A0A0P5R0R2   A0A0N8E0E1   A0A0P6AMJ1   E9H1U1   A0A0P6EB83   A0A182VSY0   A0A139WMQ5   A0A084WD23   A0A182N8R0   D6W8U0   A0A1S4H3E1   A0A182QF62  

PDB

6EG0     E-value=1.26211e-98,     Score=919

KEGG

101744523    no KO assigned | (RefSeq) lachesin-like

GO

GO:0016021   GO:0005887   GO:0005515   GO:0003964   GO:0006278   GO:0003700   GO:0005634   GO:0000287   GO:0003723   GO:0006270   GO:0042555   GO:0048384  

Length:

408

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.58728

Exp number, first 60 AAs:

0.00122

Total prob of N-in:

0.01306

outside

1  -  408

 

 

Pi

222.007007

Theta

170.528818

Tajima's D

0.930036

CLR

0.000005

CSRT

0.643717814109295

Interpretation

Uncertain