Gene

KWMTBOMO03417

Pre Gene Modal

BGIBMGA006372

Annotation

PREDICTED:_lachesin-like_[Bombyx_mori]

Location

Bomo_Chr6(-):7237849-7264361      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.345 Nuclear   Reliability : 1.203 PlasmaMembrane   Reliability : 1.2

CDS

ATGGTTCAATTTCCACCAATGCTGTCAATCCCGAATCAACTGGAAGCAGCGTATATCGGCCAAGATGTAACACTTGAGTGCCACACTGAAGCATATCCGTCGTCTATAAATTACTGGACAACAGACCGGGGAGATATGATCATTTCAGGCAATAAATATGTAACATCGTTAAGCGACGACGGATACAGTCGGAAAATGAAATTGACAATACGGAAAGTATCTCCGAGAGATTTTTCTTCCTATCGCTGCGTTGCTAAGAATTCTCTTGGAGAGACAGACGGTCTCATTCGACTTGACGAAATCTCTGCTCCTTCAACAACTAGTACAACGAGTAACTACGTTCCAACACTTCCTCCGAGAAAAAAAGGTAAACATAAAAATCGATGGCGAGACAGCTCTGCCGAGAATAGAGTAATCGGGGATTATGAGGTGGAAGAATGGAAAGATGTCGATTACGAGTCGACGCAATCTTCCGGTACAAATAGCTCACAAGGAATTTTATTTTTTACCGTTTTGTTTAGTTTTTTTGTGTTATGCAGCTGA

Protein

MVQFPPMLSIPNQLEAAYIGQDVTLECHTEAYPSSINYWTTDRGDMIISGNKYVTSLSDDGYSRKMKLTIRKVSPRDFSSYRCVAKNSLGETDGLIRLDEISAPSTTSTTSNYVPTLPPRKKGKHKNRWRDSSAENRVIGDYEVEEWKDVDYESTQSSGTNSSQGILFFTVLFSFFVLCS

Uniprot

A0A2A4K2A6   A0A194RQ21   A0A2H1VJ09   A0A212EKA1   A0A026WAB6   A0A3L8E4Q5   + More
A0A023F4V5   E2AD49   A0A0L7L996   K7J2A2   A0A0K8T4S0   A0A151WZH5   A0A195BW86   A0A146LH66   A0A182KWN5   A0A1S4GZZ7   A0A195D642   A0A195EIX3   A0A0C9RGF3   A0A232ET04   A0A158P395   A0A139WMP7   A0A0A9W3I2   A0A146MA51   E2BDU6   A0A194RTG6   A0A0A9W6G4   A0A2P8ZEA5   D6W8T8   A0A195F5V6   A0A0L7QZD5   A0A154P4H3   A0A0C9QXP8   B4JP63   A0A088AQT0   A0A1I8M262   A0A194Q304   B4KIR3   B4M9Q9   A0A0N0U412   B4N0B5   A0A2J7QVC7   A0A3B0JIW5   A0A1A9ZHU6   A0A336LZ41   Q29PB2   B4IEP8   B4Q545   Q8IP70   A0A1W4V797   B3NAE9   B3MV45   B4P3N8   A0A0A9XI90   A0A1A9X8Z5   A0A146KK58   A0A1A9X2A9   A0A2A4J3H1   A0A1B0FMB0   A0A3Q0J8E8   A0A0A9XQI0   A0A146MGR1   A0A1B6CRI0   A0A2A4J3T6   A0A1B6J1W7   A0A226F096   A0A0P5GVX0   A0A0P5JUN3   A0A0P5BN70   A0A0P5TYE6  

Pubmed

26354079    22118469    24508170    30249741    25474469    20798317    + More
26227816    20075255    26823975    20966253    12364791    28648823    21347285    18362917    19820115    25401762    29403074    17994087    25315136    15632085    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    18057021    17550304   

EMBL

NWSH01000284    PCG77772.1    KQ459896    KPJ19410.1    ODYU01002841    SOQ40820.1    + More
AGBW02014276    OWR41942.1    KK107304    EZA52923.1    QOIP01000001    RLU27443.1    GBBI01002206    JAC16506.1    GL438663    EFN68643.1    JTDY01002175    KOB71950.1    AAZX01001585    AAZX01004052    AAZX01008048    GBRD01005313    JAG60508.1    KQ982649    KYQ53167.1    KQ976403    KYM92226.1    GDHC01011924    JAQ06705.1    AAAB01008944    KQ976842    KYN07899.1    KQ978801    KYN28203.1    GBYB01007435    JAG77202.1    NNAY01002356    OXU21481.1    ADTU01007920    ADTU01007921    ADTU01007922    ADTU01007923    ADTU01007924    ADTU01007925    ADTU01007926    ADTU01007927    ADTU01007928    KQ971312    KYB29126.1    GBHO01040607    JAG02997.1    GDHC01002707    JAQ15922.1    GL447689    EFN86152.1    KPJ19411.1    GBHO01040608    JAG02996.1    PYGN01000082    PSN54843.1    EEZ98396.2    KQ981805    KYN35454.1    KQ414681    KOC63980.1    KQ434804    KZC06020.1    GBYB01005452    JAG75219.1    CH916372    EDV99488.1    KQ459551    KPI99921.1    CH933807    EDW12419.2    CH940654    EDW57935.2    KQ435859    KOX70482.1    CH963920    EDW77528.2    NEVH01010477    PNF32521.1    OUUW01000006    SPP82317.1    UFQT01000047    SSX18948.1    CH379058    EAL34381.2    CH480831    EDW46075.1    CM000361    CM002910    EDX04951.1    KMY90141.1    AE014134    BT010243    AAN10840.1    AAQ23561.1    CH954177    EDV58651.1    KQS70467.1    KQS70468.1    CH902624    EDV33110.1    CM000157    EDW88339.1    KRJ97704.1    KRJ97705.1    KRJ97707.1    KRJ97708.1    GBHO01024243    GBRD01006009    JAG19361.1    JAG59812.1    GDHC01021648    JAP96980.1    NWSH01003607    PCG66064.1    CCAG010002011    CCAG010002012    CCAG010002013    GBHO01024244    GBRD01006008    JAG19360.1    JAG59813.1    GDHC01000502    JAQ18127.1    GEDC01021485    JAS15813.1    PCG66063.1    GECU01014531    JAS93175.1    LNIX01000001    OXA63232.1    GDIQ01236207    JAK15518.1    GDIQ01198737    JAK52988.1    GDIP01182334    JAJ41068.1    GDIP01137728    JAL65986.1   

Proteomes

UP000218220    UP000053240    UP000007151    UP000053097    UP000279307    UP000000311    + More
UP000037510    UP000002358    UP000075809    UP000078540    UP000075882    UP000078542    UP000078492    UP000215335    UP000005205    UP000007266    UP000008237    UP000245037    UP000078541    UP000053825    UP000076502    UP000001070    UP000005203    UP000095301    UP000053268    UP000009192    UP000008792    UP000053105    UP000007798    UP000235965    UP000268350    UP000092445    UP000001819    UP000001292    UP000000304    UP000000803    UP000192221    UP000008711    UP000007801    UP000002282    UP000092443    UP000091820    UP000092444    UP000079169    UP000198287   

Pfam

PF07679   I-set        + More
PF07686   V-set

Interpro

IPR013098   Ig_I-set        + More
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR013783   Ig-like_fold       
IPR003598   Ig_sub2       
IPR036179   Ig-like_dom_sf       
IPR013106   Ig_V-set       

SUPFAM

SSF48726   SSF48726       

Gene 3D

2.60.40.10    

ProteinModelPortal

A0A2A4K2A6   A0A194RQ21   A0A2H1VJ09   A0A212EKA1   A0A026WAB6   A0A3L8E4Q5   + More
A0A023F4V5   E2AD49   A0A0L7L996   K7J2A2   A0A0K8T4S0   A0A151WZH5   A0A195BW86   A0A146LH66   A0A182KWN5   A0A1S4GZZ7   A0A195D642   A0A195EIX3   A0A0C9RGF3   A0A232ET04   A0A158P395   A0A139WMP7   A0A0A9W3I2   A0A146MA51   E2BDU6   A0A194RTG6   A0A0A9W6G4   A0A2P8ZEA5   D6W8T8   A0A195F5V6   A0A0L7QZD5   A0A154P4H3   A0A0C9QXP8   B4JP63   A0A088AQT0   A0A1I8M262   A0A194Q304   B4KIR3   B4M9Q9   A0A0N0U412   B4N0B5   A0A2J7QVC7   A0A3B0JIW5   A0A1A9ZHU6   A0A336LZ41   Q29PB2   B4IEP8   B4Q545   Q8IP70   A0A1W4V797   B3NAE9   B3MV45   B4P3N8   A0A0A9XI90   A0A1A9X8Z5   A0A146KK58   A0A1A9X2A9   A0A2A4J3H1   A0A1B0FMB0   A0A3Q0J8E8   A0A0A9XQI0   A0A146MGR1   A0A1B6CRI0   A0A2A4J3T6   A0A1B6J1W7   A0A226F096   A0A0P5GVX0   A0A0P5JUN3   A0A0P5BN70   A0A0P5TYE6  

PDB

6EG0     E-value=3.20751e-24,     Score=272

KEGG

101744380    no KO assigned | (RefSeq) lachesin-like

GO

GO:0016021   GO:0005887   GO:0005515   GO:0003964   GO:0006278   GO:0003700   GO:0005634   GO:0000287   GO:0003723   GO:0006270   GO:0042555   GO:0048384  

Length:

180

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.7095

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02208

outside

1  -  180

 

 

Pi

218.323743

Theta

177.524228

Tajima's D

0.909732

CLR

0.026634

CSRT

0.632818359082046

Interpretation

Uncertain