Gene

KWMTBOMO03415

Pre Gene Modal

BGIBMGA006374

Annotation

PREDICTED:_RUN_and_FYVE_domain-containing_protein_2_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr6(-):7133023-7155011      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.833

CDS

ATGGCATCTGCAAGAGAAAATGATGCAGAAGTATCACCAACATCATCTATGTCTTCTGTCAAATCTCATCCCATCGAAAGATCTTCATCTTCAAAAGATGAAAGATGGCCAGAACTTCTGATATCGCGACCACAAAAAACATATAACTCAAAAACTCGCGATCCCGTTGTCATTGAGCGCAGTAATCTCGTGAATATCTCGAAACTTATAGTGAAGGAACTAATCGAACAGTCGCTTCGTTTCGGCCGAATGCTCGACAGTGATCACTTGCCGTTGCATCACTTCTTTATTGTCCTCGAACATGTCATGCGTCATGGACTCAAACCGAAAAAGGGACTCCTCGGACCTAAAAAGGAGCTATGGGATATTCTTCAAATGGTTGAGAAGTATTCGCCTGAGGCAGCCGATATCACGGCCAGTGTCAGAGATCTTCCAACTGTGAAGACAGCAATGGGCCGCGCTCGGGCTTGGTTGCGATTGGCGTTAATGCAAAAACGACTCGCAGATTACTTGAGAATCCTCCTTGAGCATCGTGAAGATACTTTGGAGGAATATTTCGAACCCCACGCGCTGATGCTGAACGAGGAAGCTGTAATTATCACCGGTTTGCTGGTCGGTCTCAATGTTGTCGACTGCAATTTGTGTGTTAAGGAAGAAGACTTAGATAGTCAACAAGGTGTCATAGATTTCTCTTTGTATTTACGGGGCAGTAACTCTTCCAACGACATAGCAGGAAATGAGAACAACACAAACAATGAACCTAAACAACGCCACATCAACACCATGCTCGATCAGAAAAACTATATTGAAGAACTAAACCGACATCTGAACGCCACCGTAGCAAATCTCCAGGCGAAAGTCGAAAGCCTGACCACGACCAATGCGTTGATGAAGGAAGACCTTGCAATCGCAAAGAACACAATGATTCAGCTAGTCGAAGAAAACAATCAACTGAAACACGCTTTAGGTCAAGATATAACCAAAGATTCGAGAATGAAAATCACGGAACTGCAAGCAGATGAAGAGGAAAAACGAAGCGTTAAAAGTGTAACTTCTGATAGATCTAAGAGTGATAAGGATAGCGAGATGTCAAAGGCGTTAGAGGAAGAAAGGAAGAAGTATTTAGAAATGCAAAAGGAACTTGATTTGCAGATTTCATTGAAGGCAGAAATGGAGGTAGCCATGAAATTATTAGAAAAAGATATACACGACAAACAAGACACTATTATATCTCTGAGGAGGCAGCTTGACGATATAAAGCTTATCAATTTAGAAATGTACAAAAAATTACAGGAATGTGAAATTTCCTTGAAACATAAAACAGAGTTAATAGCCAAATTGGAAGCAAAGACTGAATCAATGGGCAGCACCATACATCAACTCGATGAAAAGTTACAAGAAGATAAACTAACTAGGAAGAATCTAGAAGATAATGCCCGCACATTGGGTCAAAAAGCGACCACAGCCGAAAAGAAAGCTGTGGCAGCAGAGGGAGACCTTAGAATTGAAAGAGAATGGAGGATATCTCTACAAGAATCTATGATGCGAGACCGAGACAAAATATCAAGTCTTACACAAGAAGTTGAGTCTTTGAAAGCCATTGGACAGAAATATCTTCTTTTACAAGAAGAGCAACACATCTTGAAGACTAAATACAGCGAAGCACAAAAAACTTTAGAAGAAGTCGGAGCCACGCTCAGCGAGAACAAACTTCAGCTAGCTGAGTTGTTAGAGAAGGAATCATTAGCAACTACCACAGAGGAAACACCCACTTGGGCCAACGATAAAGACGCGACGGCTTGCGCTACGTGTAATAAGGAATTCAATATTACAAGACGGAAACATCACTGTAGAATGTGTGGTCTAATATTTTGCGCAGCTTGCAGTGATAAAACTGTTGCATTGACTGGCAACACCAAACCTGTTCGTGTTTGTGGTGCGTGCTACACGGAAGCTGTCCGCCACACAGAGTAA

Protein

MASARENDAEVSPTSSMSSVKSHPIERSSSSKDERWPELLISRPQKTYNSKTRDPVVIERSNLVNISKLIVKELIEQSLRFGRMLDSDHLPLHHFFIVLEHVMRHGLKPKKGLLGPKKELWDILQMVEKYSPEAADITASVRDLPTVKTAMGRARAWLRLALMQKRLADYLRILLEHREDTLEEYFEPHALMLNEEAVIITGLLVGLNVVDCNLCVKEEDLDSQQGVIDFSLYLRGSNSSNDIAGNENNTNNEPKQRHINTMLDQKNYIEELNRHLNATVANLQAKVESLTTTNALMKEDLAIAKNTMIQLVEENNQLKHALGQDITKDSRMKITELQADEEEKRSVKSVTSDRSKSDKDSEMSKALEEERKKYLEMQKELDLQISLKAEMEVAMKLLEKDIHDKQDTIISLRRQLDDIKLINLEMYKKLQECEISLKHKTELIAKLEAKTESMGSTIHQLDEKLQEDKLTRKNLEDNARTLGQKATTAEKKAVAAEGDLRIEREWRISLQESMMRDRDKISSLTQEVESLKAIGQKYLLLQEEQHILKTKYSEAQKTLEEVGATLSENKLQLAELLEKESLATTTEETPTWANDKDATACATCNKEFNITRRKHHCRMCGLIFCAACSDKTVALTGNTKPVRVCGACYTEAVRHTE

Uniprot

A0A1E1WP88   A0A194Q4I7   A0A2A4JUY1   A0A1E1WNZ6   A0A1E1W2Q1   A0A067QY49   + More
A0A2J7Q478   A0A026WD06   A0A2J7Q461   A0A151WZP3   A0A3L8E143   A0A0C9QHC8   A0A195F4Z1   A0A195EK18   A0A1W4XF33   A0A1B6KDL4   A0A087ZRI3   A0A1W4X4L6   A0A1S4E6A5   A0A158P397   A0A1S4F1N7   A0A1L8DMD8   A0A1Q3FUB2   A0A0K8TM47   A0A0Q9WU44   A0A0A9Z5E2   A0A0K8TCQ7   W8B686   A0A0Q9X263   A0A023F3I7   A0A0Q9X1T5   A0A0A9XDF2   B4K5Z8   A0A336MP46   A0A0Q9X1S0   A0A336MTN5   A0A069DVU9   A0A1S4E6B6   A0A336MRG5   A0A1B6DMN5   A0A182F8M0   A0A182R826   A0A2M4AGZ8   A0A2M4AGV5   A0A2M4AGZ0   A0A1I8Q9M0   A0A1I8Q9N5   A0A0B4LHR8   A0A1Y9HBV3   A0A0P4VSM2   A0A084VI68   A0A182JCH9   A0A1W4URN7   A0A340TB50   A0A1I8Q9R8   Q8IMP2   F5HK19   A0A1B6EEQ6   A0A0K8V3G7   A0A1I8NGL8   A0A1I8NGL5   B4PRT7   A0A0R1E544   A0A0P8YGQ7   A0A0P8Y1A8   A0A034VGG0   A0A0N8P1Q0   A0A0A1X5B7   B4M5R6   A0A0Q9W0H9   A0A3B0JFU8   I5ANI8   A0A0R3NLS0   T1IKM3   A0A2R5LMI0   L7MCR1   A0A0L0C7I2   A0A1J1I8F7   A0A087UC24   Q17IA1   A0A1E1XHK3   A0A131XCI8   A0A2L2YQS6   A0A195D4V6   J9JSV1   A0A1S3I786   A0A2T7Q1M3   A0A1S3I7A0   A0A2R2MRA7   A0A2R2MSA4   E9G458   A0A0K2T5U1   A0A0T6B3A8  

Pubmed

26354079    24845553    24508170    30249741    21347285    26369729    + More
17994087    25401762    24495485    25474469    18057021    26334808    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    27129103    24438588    26109357    26109356    12364791    14747013    17210077    25315136    17550304    25348373    25830018    15632085    25576852    26108605    17510324    28503490    28049606    26561354    21292972   

EMBL

GDQN01002403    JAT88651.1    KQ459551    KPI99924.1    NWSH01000532    PCG75835.1    + More
GDQN01002339    JAT88715.1    GDQN01009873    GDQN01007381    JAT81181.1    JAT83673.1    KK853216    KDR09775.1    NEVH01018390    PNF23375.1    KK107304    EZA52929.1    PNF23373.1    KQ982649    KYQ53171.1    QOIP01000001    RLU26346.1    GBYB01014038    JAG83805.1    KQ981805    KYN35461.1    KQ978801    KYN28209.1    GEBQ01030429    JAT09548.1    ADTU01007944    ADTU01007945    ADTU01007946    ADTU01007947    GFDF01006584    JAV07500.1    GFDL01003917    JAV31128.1    GDAI01002598    JAI15005.1    CH964251    KRF99695.1    GBHO01003930    JAG39674.1    GBRD01002630    JAG63191.1    GAMC01017729    JAB88826.1    CH933806    KRG02013.1    GBBI01002779    JAC15933.1    KRG02010.1    KRG02011.1    GBHO01025580    GBRD01002631    JAG18024.1    JAG63190.1    EDW16235.2    UFQT01001912    SSX32142.1    KRG02015.1    SSX32143.1    GBGD01000943    JAC87946.1    SSX32141.1    GEDC01010408    JAS26890.1    GGFK01006739    MBW40060.1    GGFK01006702    MBW40023.1    GGFK01006738    MBW40059.1    AE014297    AHN57559.1    GDKW01002620    JAI53975.1    ATLV01013301    KE524850    KFB37662.1    BT044470    AAN14401.1    ACH92535.1    AAAB01008851    EGK96630.1    GEDC01000890    JAS36408.1    GDHF01018870    GDHF01011926    JAI33444.1    JAI40388.1    CM000160    EDW98530.2    KRK04328.1    CH902617    KPU80539.1    KPU80543.1    GAKP01018087    JAC40865.1    KPU80540.1    GBXI01007763    JAD06529.1    CH940652    EDW58992.2    KRF78636.1    KRF78634.1    OUUW01000005    SPP80995.1    CM000070    EIM52523.1    KRT00080.1    JH430577    GGLE01006617    MBY10743.1    GACK01003447    JAA61587.1    JRES01000809    KNC28217.1    CVRI01000044    CRK96552.1    KK119164    KFM74913.1    CH477241    EAT46394.1    GFAC01000453    JAT98735.1    GEFH01004489    JAP64092.1    IAAA01040096    LAA10367.1    KQ976842    KYN07907.1    ABLF02035465    PZQS01000001    PVD39571.1    GL732531    EFX85697.1    HACA01003824    CDW21185.1    LJIG01016056    KRT81748.1   

Proteomes

UP000053268    UP000218220    UP000027135    UP000235965    UP000053097    UP000075809    + More
UP000279307    UP000078541    UP000078492    UP000192223    UP000005203    UP000079169    UP000005205    UP000007798    UP000009192    UP000069272    UP000075900    UP000095300    UP000000803    UP000030765    UP000075880    UP000192221    UP000075903    UP000007062    UP000095301    UP000002282    UP000007801    UP000008792    UP000268350    UP000001819    UP000037069    UP000183832    UP000054359    UP000008820    UP000078542    UP000007819    UP000085678    UP000245119    UP000000305   

PRIDE

Q8IMP2   

Pfam

PF02759   RUN        + More
PF01363   FYVE
PF00121   TIM

Interpro

IPR037213   Run_dom_sf        + More
IPR000306   Znf_FYVE       
IPR001841   Znf_RING       
IPR004012   Run_dom       
IPR011011   Znf_FYVE_PHD       
IPR017455   Znf_FYVE-rel       
IPR013083   Znf_RING/FYVE/PHD       
IPR020861   Triosephosphate_isomerase_AS       
IPR013785   Aldolase_TIM       
IPR022896   TrioseP_Isoase_bac/euk       
IPR000652   Triosephosphate_isomerase       
IPR035990   TIM_sf       

SUPFAM

SSF140741   SSF140741        + More
SSF57903   SSF57903       
SSF51351   SSF51351       

Gene 3D

3.30.40.10     3.20.20.70    

CDD

cd00311  TIM

ProteinModelPortal

A0A1E1WP88   A0A194Q4I7   A0A2A4JUY1   A0A1E1WNZ6   A0A1E1W2Q1   A0A067QY49   + More
A0A2J7Q478   A0A026WD06   A0A2J7Q461   A0A151WZP3   A0A3L8E143   A0A0C9QHC8   A0A195F4Z1   A0A195EK18   A0A1W4XF33   A0A1B6KDL4   A0A087ZRI3   A0A1W4X4L6   A0A1S4E6A5   A0A158P397   A0A1S4F1N7   A0A1L8DMD8   A0A1Q3FUB2   A0A0K8TM47   A0A0Q9WU44   A0A0A9Z5E2   A0A0K8TCQ7   W8B686   A0A0Q9X263   A0A023F3I7   A0A0Q9X1T5   A0A0A9XDF2   B4K5Z8   A0A336MP46   A0A0Q9X1S0   A0A336MTN5   A0A069DVU9   A0A1S4E6B6   A0A336MRG5   A0A1B6DMN5   A0A182F8M0   A0A182R826   A0A2M4AGZ8   A0A2M4AGV5   A0A2M4AGZ0   A0A1I8Q9M0   A0A1I8Q9N5   A0A0B4LHR8   A0A1Y9HBV3   A0A0P4VSM2   A0A084VI68   A0A182JCH9   A0A1W4URN7   A0A340TB50   A0A1I8Q9R8   Q8IMP2   F5HK19   A0A1B6EEQ6   A0A0K8V3G7   A0A1I8NGL8   A0A1I8NGL5   B4PRT7   A0A0R1E544   A0A0P8YGQ7   A0A0P8Y1A8   A0A034VGG0   A0A0N8P1Q0   A0A0A1X5B7   B4M5R6   A0A0Q9W0H9   A0A3B0JFU8   I5ANI8   A0A0R3NLS0   T1IKM3   A0A2R5LMI0   L7MCR1   A0A0L0C7I2   A0A1J1I8F7   A0A087UC24   Q17IA1   A0A1E1XHK3   A0A131XCI8   A0A2L2YQS6   A0A195D4V6   J9JSV1   A0A1S3I786   A0A2T7Q1M3   A0A1S3I7A0   A0A2R2MRA7   A0A2R2MSA4   E9G458   A0A0K2T5U1   A0A0T6B3A8  

PDB

2CXL     E-value=5.67759e-52,     Score=518

KEGG

101743746    no KO assigned | (RefSeq) RUN and FYVE domain-containing protein 2

GO

GO:0046872   GO:0005737   GO:0017137   GO:0016021   GO:0006096   GO:0004807   GO:0006508   GO:0005515   GO:0003700   GO:0005634   GO:0000287   GO:0003723   GO:0006270   GO:0042555   GO:0048384  

Length:

657

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0059

Exp number, first 60 AAs:

5e-05

Total prob of N-in:

0.00100

outside

1  -  657

 

 

Pi

291.957775

Theta

201.24279

Tajima's D

1.331697

CLR

0.109809

CSRT

0.746062696865157

Interpretation

Uncertain