Gene

KWMTBOMO03413

Pre Gene Modal

BGIBMGA006375

Annotation

PREDICTED:_programmed_cell_death_protein_2-like_[Amyelois_transitella]

Location

Bomo_Chr6(-):7113733-7121041      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.624 Nuclear   Reliability : 1.492

CDS

ATGGCCAAAAGACACGGCAGAGTTTATTTAGGATACGAAGAAGAATTTATAGCCGAAAAAAATCAAACCTTAGTCAATTACAGTGTCAACAAAATTGGTGGTCAGCCTGATTGGCCACCGTTGGAAAATTTTCAATATTCTTTTAAATGTCCGCTTTGTGGACTACATCGGCTACTGGTTATACAATGCTATGCTCCTTTGGAAAATTCTGTTTACCACCGAACTTTATATGTTTTTGCCTGCATCAATCCCAATTGCTGGATCCAATCAGAAAGCTGGTTATGTTTACGTATGCAATATGAAGATAAAAAGACTAAAGAGGCAAGTGCAATAGTTGCAATACCAAATCTAGAAACCAACTTAAGTTGGTGTAGTGGTGCAGACGAGTGGGATGAAAATGATAATGATGACTCAGCTAACGGAAACCTGATGAGTGTTGACAATGACCCTAGCCCCAATAATGTTGTGCAAAGAATTTCTGATGAAGATGAAGAGAGCAATTCCTATGAACTCGAAACTGTCGAACAAGCCCTTGGGAACCTCCAAATGTTTGATGCTCATAATGCAAATATGTCCCCAGTGCAAGGTGCAGTTGGTGCAATATCTGCTCCTATCGCAGCAGCCGAATTAGAAGGTGGAGATGAATCAGGCTTAGTCACTGTTGATACACCAACTATGCCTTCAAGAGATATAGAAACTTTATTGCATAAGACAGCTGAATTACCAGGGGACTTGAGAAGCCGTCTTATGTGCGCCCCAATGCAATTTACACCAAAATATATTTATGTAGAGGAAGAATGGAAAATTTCTGGTAACCAAGATGACAAAGTTAATGAACTACTTAATAAATATAGCAAAGAAAATGAGATAGAGCATGCAATTGACAAAGCTGGTGGTGGTGGTGGAGATGAAGAAACATATGAAGAGGCAGCACCCTTACATGGCGATAGATTGTTTCATGCATTTATTTCACGGCTTCGTCAAAATCCAGGACAAATCTTAAGGTACTCCCGAGACGAACCGCCCATACTAGGTGCTTCAATATCAAGTTCTGGGACTCCAGATTGCCCTTCCGTCCCAACTATCTGTGATCGATGCGGTTCCAGATTAATTTGCGAATTGCAACTCGTACCCGAATTCGCAGAGGCCCTTCGTTTGCCAAACAACACTGCTCTTGATCATTTACATTTCCTTTCTGTCCTTATATTTACGTGCTCACTGAGTTGCTGGCAACCCAATGATGTCTACATAAAGGAAACAGTAGTCTTCCAACCGGAAGTGATGTGA

Protein

MAKRHGRVYLGYEEEFIAEKNQTLVNYSVNKIGGQPDWPPLENFQYSFKCPLCGLHRLLVIQCYAPLENSVYHRTLYVFACINPNCWIQSESWLCLRMQYEDKKTKEASAIVAIPNLETNLSWCSGADEWDENDNDDSANGNLMSVDNDPSPNNVVQRISDEDEESNSYELETVEQALGNLQMFDAHNANMSPVQGAVGAISAPIAAAELEGGDESGLVTVDTPTMPSRDIETLLHKTAELPGDLRSRLMCAPMQFTPKYIYVEEEWKISGNQDDKVNELLNKYSKENEIEHAIDKAGGGGGDEETYEEAAPLHGDRLFHAFISRLRQNPGQILRYSRDEPPILGASISSSGTPDCPSVPTICDRCGSRLICELQLVPEFAEALRLPNNTALDHLHFLSVLIFTCSLSCWQPNDVYIKETVVFQPEVM

Uniprot

A0A2A4JWQ1   A0A2H1WDG9   A0A194Q309   A0A194RTG1   A0A1Y1NCF6   Q17EA2   + More
A0A1W4XGE5   E0VDY4   A0A139WMF8   A0A182RPW7   A0A182F6S0   K7J130   A0A182VYX3   A0A232FNH5   A0A182XVS9   A0A084VHL3   A0A182MX42   A0A182V3D7   A0A182XBF2   A0A182I093   Q7PYJ5   A0A067RM26   A0A182QKX3   A0A182G3H0   A0A182PKH0   A0A182NS95   A0A1L8DJD0   A0A182J5E9   A0A0C9QTH8   W5JKK4   U5EXL9   A0A2M4AV22   A0A1L8DJB5   A0A336MIW4   A0A182KFP9   A0A182U9S9   A0A182S7I2   A0A2J7PRU5   A0A154NWC7   A0A1B6CVA3   A0A2R7W0S3   A0A1B6EQJ5   A0A0V0GCN8   A0A224XL67   A0A023F210   A0A1B6KXX9   J3JXB5   A0A0L7RGP3   A0A1Q3F9N5   N6UAW2   E2C642   E2AX02   A0A0A1WNA1   F4W596   A0A146M603   A0A1I8M3H4   A0A0A9WTC4   W8BMP9   A0A026WMH8   A0A1A9Y8L3   A0A1B0BRF6   A0A158NYR9   A0A1A9VLK2   A0A1A9X2J7   A0A1B0F9B6   V5GBH9   A0A182KLW3   A0A088ADL3   T1HXP8   A0A195BTJ0   A0A2A3EPF7   A0A1B6HSD2   W8BHP9   A0A1A9ZN45   A0A1Q3F9Q9   A0A195CW44   A0A0L0CU84   B4N8S0   Q29B19   B4JI84   B4GZ74   A0A3B0JGC3   B4KAA6   B3M2S0   B4M6A1   A0A1B0CR97   B4QSA0   Q29R43   Q9VG62   B4HGW9   A0A0M4EJN7   B3P4B0   A0A0M3QX37   A0A1W4UPN1   A0A1I8P7Y4   A0A1B0GP90   B0W971   A0A0M8ZRU0  

Pubmed

26354079    28004739    17510324    20566863    18362917    19820115    + More
20075255    28648823    25244985    24438588    12364791    14747013    17210077    24845553    26483478    20920257    23761445    25474469    22516182    23537049    20798317    25830018    21719571    26823975    25315136    25401762    24495485    24508170    30249741    21347285    20966253    26108605    17994087    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867   

EMBL

NWSH01000532    PCG75830.1    ODYU01007909    SOQ51101.1    KQ459551    KPI99926.1    + More
KQ459896    KPJ19406.1    GEZM01006925    JAV95561.1    CH477284    EAT44776.1    DS235088    EEB11590.1    KQ971312    KYB29229.1    NNAY01000009    OXU32070.1    ATLV01013177    KE524842    KFB37457.1    AXCM01011873    APCN01002055    AAAB01008987    EAA01117.4    KK852593    KDR20671.1    AXCN02000205    JXUM01141442    KQ569246    KXJ68706.1    GFDF01007553    JAV06531.1    GBYB01007014    GBYB01007015    JAG76781.1    JAG76782.1    ADMH02001255    ETN63405.1    GANO01000015    JAB59856.1    GGFK01011325    MBW44646.1    GFDF01007542    JAV06542.1    UFQT01001369    SSX30226.1    NEVH01021952    PNF19058.1    KQ434773    KZC03976.1    GEDC01019950    JAS17348.1    KK854227    PTY13337.1    GECZ01029547    JAS40222.1    GECL01000612    JAP05512.1    GFTR01005858    JAW10568.1    GBBI01003753    JAC14959.1    GEBQ01023669    JAT16308.1    BT127884    KB632309    AEE62846.1    ERL92030.1    KQ414596    KOC69999.1    GFDL01010754    JAV24291.1    APGK01042225    APGK01042226    KB741002    ENN75772.1    GL452916    EFN76585.1    GL443495    EFN62022.1    GBXI01014409    JAC99882.1    GL887645    EGI70546.1    GDHC01003418    JAQ15211.1    GBHO01032963    JAG10641.1    GAMC01008287    JAB98268.1    KK107151    QOIP01000003    EZA57235.1    RLU24715.1    JXJN01019079    ADTU01004236    CCAG010018108    GALX01000986    JAB67480.1    ACPB03021026    KQ976407    KYM91389.1    KZ288206    PBC33086.1    GECU01030127    JAS77579.1    GAMC01008288    JAB98267.1    GFDL01010721    JAV24324.1    KQ977220    KYN04903.1    JRES01000007    KNC34919.1    CH964232    EDW81521.1    CM000070    EAL27180.1    CH916369    EDV92965.1    CH479198    EDW28092.1    OUUW01000005    SPP81397.1    CH933806    EDW14593.1    CH902617    EDV42391.1    CH940652    EDW59177.1    AJWK01024493    AJWK01024494    CM000364    EDX13196.1    BT024197    ABC86259.1    AE014297    AAF54826.1    CH480815    EDW42440.1    CP012526    ALC47184.1    CH954181    EDV49355.1    ALC45253.1    AJVK01033228    DS231862    EDS39768.1    KQ435944    KOX68239.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000008820    UP000192223    UP000009046    + More
UP000007266    UP000075900    UP000069272    UP000002358    UP000075920    UP000215335    UP000076408    UP000030765    UP000075883    UP000075903    UP000076407    UP000075840    UP000007062    UP000027135    UP000075886    UP000069940    UP000249989    UP000075885    UP000075884    UP000075880    UP000000673    UP000075881    UP000075902    UP000075901    UP000235965    UP000076502    UP000030742    UP000053825    UP000019118    UP000008237    UP000000311    UP000007755    UP000095301    UP000053097    UP000279307    UP000092443    UP000092460    UP000005205    UP000078200    UP000091820    UP000092444    UP000075882    UP000005203    UP000015103    UP000078540    UP000242457    UP000092445    UP000078542    UP000037069    UP000007798    UP000001819    UP000001070    UP000008744    UP000268350    UP000009192    UP000007801    UP000008792    UP000092461    UP000000304    UP000000803    UP000001292    UP000092553    UP000008711    UP000192221    UP000095300    UP000092462    UP000002320    UP000053105   

PRIDE

Q29R43    Q9VG62   

Pfam

PF04194   PDCD2_C

Interpro

IPR007320   PDCD2_C       

ProteinModelPortal

A0A2A4JWQ1   A0A2H1WDG9   A0A194Q309   A0A194RTG1   A0A1Y1NCF6   Q17EA2   + More
A0A1W4XGE5   E0VDY4   A0A139WMF8   A0A182RPW7   A0A182F6S0   K7J130   A0A182VYX3   A0A232FNH5   A0A182XVS9   A0A084VHL3   A0A182MX42   A0A182V3D7   A0A182XBF2   A0A182I093   Q7PYJ5   A0A067RM26   A0A182QKX3   A0A182G3H0   A0A182PKH0   A0A182NS95   A0A1L8DJD0   A0A182J5E9   A0A0C9QTH8   W5JKK4   U5EXL9   A0A2M4AV22   A0A1L8DJB5   A0A336MIW4   A0A182KFP9   A0A182U9S9   A0A182S7I2   A0A2J7PRU5   A0A154NWC7   A0A1B6CVA3   A0A2R7W0S3   A0A1B6EQJ5   A0A0V0GCN8   A0A224XL67   A0A023F210   A0A1B6KXX9   J3JXB5   A0A0L7RGP3   A0A1Q3F9N5   N6UAW2   E2C642   E2AX02   A0A0A1WNA1   F4W596   A0A146M603   A0A1I8M3H4   A0A0A9WTC4   W8BMP9   A0A026WMH8   A0A1A9Y8L3   A0A1B0BRF6   A0A158NYR9   A0A1A9VLK2   A0A1A9X2J7   A0A1B0F9B6   V5GBH9   A0A182KLW3   A0A088ADL3   T1HXP8   A0A195BTJ0   A0A2A3EPF7   A0A1B6HSD2   W8BHP9   A0A1A9ZN45   A0A1Q3F9Q9   A0A195CW44   A0A0L0CU84   B4N8S0   Q29B19   B4JI84   B4GZ74   A0A3B0JGC3   B4KAA6   B3M2S0   B4M6A1   A0A1B0CR97   B4QSA0   Q29R43   Q9VG62   B4HGW9   A0A0M4EJN7   B3P4B0   A0A0M3QX37   A0A1W4UPN1   A0A1I8P7Y4   A0A1B0GP90   B0W971   A0A0M8ZRU0  

KEGG

101743605    K14801 pre-rRNA-processing protein TSR4 | (RefSeq) programmed cell death protein 2-like

GO

GO:0005737   GO:0016021   GO:0008270   GO:0005515   GO:0003700   GO:0005634   GO:0000287   GO:0003723   GO:0006270   GO:0042555   GO:0048384  

Length:

428

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.1088

Exp number, first 60 AAs:

0.00073

Total prob of N-in:

0.01637

outside

1  -  428

 

 

Pi

221.076774

Theta

180.681815

Tajima's D

0.472474

CLR

1.159968

CSRT

0.508274586270686

Interpretation

Uncertain