Gene

KWMTBOMO03412  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006376

Annotation

p23-like_protein_[Bombyx_mori]

Location

Bomo_Chr6(-):7107732-7108321      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.07

CDS

ATGTCTAGCGAAATTTCAGTTCCACCGCCAGTATTATGGGCACAACGAAAGGAAGATGTTTTTCTTACATTTAGTGTGGAAACTAAAGATCCGACGATCAAAATAGAAAAGGATTCAGTGTATTTTAGAGGTGAAGGTGCGCCGGATAATAGACTACATGAGGTAACGATAGCACTGTACGACACTGTTCTTCCGGAAAAGAGTGTTTTTGTAAATAAGGGCAGATGTGTGGAGATGATATTACGGAAGGAAAAAACAGATGGTCCATTCTGGCCGACGCTAACAAAAGACAAGAAAAAGCCGCATTACCTGAAAATTGATTTCAACAAATGGAATGATGAGGATGATGAAGTTGAAGAAAATAATTCATATGATTTCGAGCAAATGCTCCAGAACTTTGGTGGAGCTGGTGGTCCTGGGCAGAAGGCAGAAAAACCTTCGTTTGATGACTTGGAAACTGACTCTGATGATGAGAATTTACCTGATCTGGAATAA

Protein

MSSEISVPPPVLWAQRKEDVFLTFSVETKDPTIKIEKDSVYFRGEGAPDNRLHEVTIALYDTVLPEKSVFVNKGRCVEMILRKEKTDGPFWPTLTKDKKKPHYLKIDFNKWNDEDDEVEENNSYDFEQMLQNFGGAGGPGQKAEKPSFDDLETDSDDENLPDLE

Uniprot

Q5CCL6   A0A2H1WE07   A0A2A4JVI8   A0A1E1WG54   S4NYB5   A0A0L7L772   + More
A0A212FBQ4   A0A194RTF6   I4DJJ1   D6WJF6   E2AJL0   A0A0J7NFH2   A0A067QPA7   A0A2A4JX49   A0A026WBJ7   A0A3L8DTH9   A0A1B6HUY6   A0A2J7QVH9   A0A2J7QVH0   A0A1B6CKZ7   A0A1B6M6L6   A0A1B6CPB7   R4UMY2   V5H153   A0A1Y1N096   A0A158P357   E2BX56   A0A088ARS8   A0A170Z2A9   A0A2H1WYE5   A0A224XM34   A0A069DNN7   A0A195F2R5   A0A2A3E3L5   V9IL14   A0A151WFH7   A0A1E1W0Z9   A0A0P4VSE5   R4G851   A0A0T6B1L5   A0A0V0G5E8   A0A0L7RDC4   A0A0N0U2R2   S4PWL3   T1JH99   A0A2P2HW88   H9JDZ2   A0A195BD20   A0A182WDI8   A0A087T9F5   U5ESS5   A0A3Q0JGP4   A0A195DDR1   A0A151IGE1   A0A0C9RNA8   A0A182QV73   A0A2R5LH61   A0A182KL42   A0A147BA41   A0A182JKP0   A0A2M3Z136   A0A182V9K8   A0A182X5M6   Q7QHE6   A0A182HWC3   T1E8M2   A0A182RTD0   A0A182LUY1   A0A0K8TPP8   U4UER5   A0A1Z5L6D4   A0A182KBU8   M9VTU4   A0A182UKV5   A0A2M4A8B0   W5J5U0   A0A293LGR1   A0A2M4C1H4   A0A182FKK9   N6UF92   R4WNB2   A0A182NZM4   A0A182N2B5   A0A182YB23   A0A1W7R9X9   E7D1W6   A0A182SNF6   V3ZZ19   A0A023G824   A0A2L2Y2D7   A0A336MGZ7  

Pubmed

19121390    23622113    26227816    22118469    26354079    22651552    + More
18362917    19820115    20798317    24845553    24508170    30249741    28004739    21347285    26334808    27129103    20966253    12364791    14747013    17210077    26369729    23537049    28528879    20920257    23761445    23691247    25244985    23254933    26561354   

EMBL

BABH01009253    AB206399    BAD90845.1    ODYU01007909    SOQ51102.1    NWSH01000532    + More
PCG75829.1    GDQN01005082    JAT85972.1    GAIX01013865    JAA78695.1    JTDY01002482    KOB71328.1    AGBW02009294    OWR51148.1    KQ459896    KPJ19401.1    AK401459    KQ459551    BAM18081.1    KPI99932.1    KQ971342    EFA03889.1    GL440027    EFN66405.1    LBMM01005677    KMQ91295.1    KK853097    KDR11450.1    NWSH01000412    PCG76571.1    KK107293    EZA53333.1    QOIP01000005    RLU23068.1    GECU01029217    JAS78489.1    NEVH01010475    PNF32583.1    PNF32582.1    GEDC01023159    JAS14139.1    GEBQ01019645    GEBQ01008419    JAT20332.1    JAT31558.1    GEDC01021976    JAS15322.1    KC571976    AGM32475.1    GALX01001898    JAB66568.1    GEZM01016200    JAV91341.1    ADTU01001303    GL451202    EFN79775.1    GEMB01002688    JAS00507.1    ODYU01012016    SOQ58093.1    GFTR01002880    JAW13546.1    GBGD01003206    JAC85683.1    KQ981855    KYN34753.1    KZ288427    PBC25882.1    JR050040    AEY61161.1    KQ983219    KYQ46535.1    GDQN01010386    GDQN01005966    JAT80668.1    JAT85088.1    GDKW01001208    JAI55387.1    ACPB03000870    GAHY01001582    JAA75928.1    LJIG01016180    KRT81376.1    GECL01003549    JAP02575.1    KQ414614    KOC68824.1    KQ438551    KOX67174.1    GAIX01006588    JAA85972.1    JH432223    IACF01000019    LAB65836.1    BABH01002561    KQ976522    KYM82085.1    KK114126    KFM61744.1    GANO01003099    JAB56772.1    KQ980989    KYN10564.1    KQ977726    KYN00294.1    GBYB01008566    JAG78333.1    AXCN02001729    GGLE01004662    MBY08788.1    GEIB01000100    JAR87659.1    GGFM01001496    MBW22247.1    AAAB01008816    EAA05132.4    APCN01001484    GAMD01002633    JAA98957.1    AXCM01001359    GDAI01001500    JAI16103.1    KB632288    ERL91527.1    GFJQ02004115    JAW02855.1    KC261579    AGJ83338.1    GGFK01003715    MBW37036.1    ADMH02002090    ETN59356.1    GFWV01003192    MAA27922.1    GGFJ01009983    MBW59124.1    APGK01037418    KB740948    ENN77327.1    AK417101    BAN20316.1    GFAH01000430    JAV47959.1    HQ006070    ADV40360.1    KB203115    ESO86251.1    GBBM01006363    JAC29055.1    IAAA01000434    IAAA01000436    IAAA01000437    LAA02336.1    UFQS01000939    UFQT01000939    SSX07859.1    SSX28093.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000007151    UP000053240    UP000053268    + More
UP000007266    UP000000311    UP000036403    UP000027135    UP000053097    UP000279307    UP000235965    UP000005205    UP000008237    UP000005203    UP000078541    UP000242457    UP000075809    UP000015103    UP000053825    UP000053105    UP000078540    UP000075920    UP000054359    UP000079169    UP000078492    UP000078542    UP000075886    UP000075882    UP000075880    UP000075903    UP000076407    UP000007062    UP000075840    UP000075900    UP000075883    UP000030742    UP000075881    UP000075902    UP000000673    UP000069272    UP000019118    UP000075885    UP000075884    UP000076408    UP000075901    UP000030746   

PRIDE

Q5CCL6    H9JDZ2   

Pfam

PF04969   CS

Interpro

IPR007052   CS_dom        + More
IPR008978   HSP20-like_chaperone       

SUPFAM

SSF49764   SSF49764       

Gene 3D

2.60.40.790    

ProteinModelPortal

Q5CCL6   A0A2H1WE07   A0A2A4JVI8   A0A1E1WG54   S4NYB5   A0A0L7L772   + More
A0A212FBQ4   A0A194RTF6   I4DJJ1   D6WJF6   E2AJL0   A0A0J7NFH2   A0A067QPA7   A0A2A4JX49   A0A026WBJ7   A0A3L8DTH9   A0A1B6HUY6   A0A2J7QVH9   A0A2J7QVH0   A0A1B6CKZ7   A0A1B6M6L6   A0A1B6CPB7   R4UMY2   V5H153   A0A1Y1N096   A0A158P357   E2BX56   A0A088ARS8   A0A170Z2A9   A0A2H1WYE5   A0A224XM34   A0A069DNN7   A0A195F2R5   A0A2A3E3L5   V9IL14   A0A151WFH7   A0A1E1W0Z9   A0A0P4VSE5   R4G851   A0A0T6B1L5   A0A0V0G5E8   A0A0L7RDC4   A0A0N0U2R2   S4PWL3   T1JH99   A0A2P2HW88   H9JDZ2   A0A195BD20   A0A182WDI8   A0A087T9F5   U5ESS5   A0A3Q0JGP4   A0A195DDR1   A0A151IGE1   A0A0C9RNA8   A0A182QV73   A0A2R5LH61   A0A182KL42   A0A147BA41   A0A182JKP0   A0A2M3Z136   A0A182V9K8   A0A182X5M6   Q7QHE6   A0A182HWC3   T1E8M2   A0A182RTD0   A0A182LUY1   A0A0K8TPP8   U4UER5   A0A1Z5L6D4   A0A182KBU8   M9VTU4   A0A182UKV5   A0A2M4A8B0   W5J5U0   A0A293LGR1   A0A2M4C1H4   A0A182FKK9   N6UF92   R4WNB2   A0A182NZM4   A0A182N2B5   A0A182YB23   A0A1W7R9X9   E7D1W6   A0A182SNF6   V3ZZ19   A0A023G824   A0A2L2Y2D7   A0A336MGZ7  

PDB

1EJF     E-value=2.48492e-09,     Score=143

KEGG

692504    K15730 cytosolic prostaglandin-E synthase [EC:5.3.99.3] | (RefSeq) p23-like protein

PATHWAY

00590    Arachidonic acid metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0006457   GO:0051879   GO:0051087   GO:0051131   GO:0005737   GO:0005829   GO:0005634  

Length:

164

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00021

Exp number, first 60 AAs:

9e-05

Total prob of N-in:

0.01971

outside

1  -  164

 

 

Pi

230.156089

Theta

208.864773

Tajima's D

0.34888

CLR

0

CSRT

0.468626568671566

Interpretation

Uncertain