SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03401  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006497
Annotation
Renin_receptor_[Papilio_xuthus]
Location in the cell
PlasmaMembrane   Reliability : 1.947
 

Sequence

CDS
ATGGCTGCAACTATGGTATCTGTATGGGTTTTCTTAATCTCTTCAATAATAGGTATCAATGCCTCTGGCGAACTAAGCATCCTCCATAGTCCTGAGTCGTTAAGTTTCTCTGGTTCCAGTAAAACTTTCGAGAGTCTTTTAAAAGAAATATTTTCTGCTTCTCTTGGCCTTTCCGTTGAAGAGAACTCCGAATGGAATGGATTATTGATAACTGATCCGTTCAACACTCCTGAAGCAGTTGTCGAAGTTTACATTAGTGGCATATCCAGTCTGGGGAGTTCCGCTGATTTTAAATCCAAAAAGTATCCTTTAGTTGTAGATGAGTATGAACCTGATACTTTTGATGTATTAAAACACAGAATCAATCAACGTTTTACCAATGGAGGCAATAAGCTTGTGAATATCAATTTAAGTGACTCTGATCAGCTTTTGTCATATTCAAATGTGTTAGGTGATTTAGATATTCCAAAAGTTAAAAAACAGTCCTTGCAGCACTTAAAATCTTCAGTTGAAGAAGACTTCCAATTTCTAAGTGAACTTGCAGCCTTAAAAGCTGTCACAGAAAAGGTGGAATCTGGTGCTATCAGCGCAGATAATATCATCGACTTTTACAACTTACGAATCAATTCTTTGCATGCACTACGTGATTTCCATGGTCCTAACTCGTTACAAACTAAGGAAGCTAAAAAGTTACTGGGTGAAGCACTTGAAGAATTAACAAAGGCGTTTGTAAAAGCATATGATGGTTCAGTTTTGGTCACAGCTGTAACAACTGACATTGTCCACACGCGCCGTGCTATTCGCTCGGTATCTGGAAATGTCGAACTCAAGAATAGTGTCGATGAGGATGGTTACTCAGCTGATTATGCTGCCATATTCAACATCATCCTGTGGTTCGGTGTTGTATTCACCTTTACCTTGATCGCCATTGTATACGCCCTAATGGACATGGACCCCGGCAGGGACTCCATTATCTATCGTATGACCAACACTAGGATGAAGAAAGACAACTAA
Protein
MAATMVSVWVFLISSIIGINASGELSILHSPESLSFSGSSKTFESLLKEIFSASLGLSVEENSEWNGLLITDPFNTPEAVVEVYISGISSLGSSADFKSKKYPLVVDEYEPDTFDVLKHRINQRFTNGGNKLVNINLSDSDQLLSYSNVLGDLDIPKVKKQSLQHLKSSVEEDFQFLSELAALKAVTEKVESGAISADNIIDFYNLRINSLHALRDFHGPNSLQTKEAKKLLGEALEELTKAFVKAYDGSVLVTAVTTDIVHTRRAIRSVSGNVELKNSVDEDGYSADYAAIFNIILWFGVVFTFTLIAIVYALMDMDPGRDSIIYRMTNTRMKKDN

Summary

EMBL
BABH01009246    GAIX01003821    JAA88739.1    NWSH01000532    PCG75845.1    KQ459551    + More
KPI99933.1    AGBW02009294    OWR51143.1    GDQN01011323    GDQN01002886    JAT79731.1    JAT88168.1    PCG75846.1    ODYU01009767    SOQ54419.1    LJIG01002988    KRT83952.1    KQ971342    EFA03659.1    ODYU01010883    SOQ56264.1    BT127931    AEE62893.1    APGK01029752    APGK01029753    APGK01029754    APGK01029755    KB740741    ENN79103.1    PYGN01000522    PSN44884.1    KB632375    ERL93911.1    NEVH01018421    PNF23280.1    KK852613    KDR20235.1    GEZM01046312    JAV77341.1    GBYB01004716    GBYB01010867    JAG74483.1    JAG80634.1    KU932273    APA33909.1    GL448558    EFN84216.1    GL763459    EFZ19664.1    GBHO01010012    GBHO01009314    GBHO01009312    GBRD01006341    GBRD01006340    GDHC01019279    GDHC01012477    JAG33592.1    JAG34290.1    JAG34292.1    JAG59480.1    JAP99349.1    JAQ06152.1    KY030954    ATU82705.1    GECU01023704    GECU01020276    JAS84002.1    JAS87430.1    GECZ01017353    JAS52416.1    GECZ01002536    JAS67233.1    GEBQ01013184    JAT26793.1    KY563472    ARK19881.1    GFTR01005084    JAW11342.1    GALX01003712    JAB64754.1    GEDC01015963    JAS21335.1    ACPB03020385    GFDF01001855    JAV12229.1    GFDF01001854    JAV12230.1    NNAY01000306    OXU29331.1    KZ288510    PBC25117.1    JRES01000280    KNC32746.1    AXCN02000307    JR040257    AEY59053.1    KQ435762    KOX75458.1    GGFM01000825    MBW21576.1    ADMH02000295    ETN67085.1    AAAB01008851    EAA07359.4    APCN01002208    GAMD01002472    JAA99118.1    GANO01001552    JAB58319.1    KQ414686    KOC63756.1    GGFJ01007310    MBW56451.1    GGFJ01007251    MBW56392.1    CP012526    ALC48044.1    GGFJ01007250    MBW56391.1    CM000364    EDX13655.1    AE014297    AY051790    AAF54350.1    AAK93214.1    GGFK01002061    MBW35382.1    CH480815    EDW42914.1    CH902617    EDV43304.1    DS232064    EDS33672.1    GGMR01007310    MBY19929.1    ATLV01013301    KE524850    KFB37663.1    CM000160    EDW96628.1    GFXV01002472    MBW14277.1    AXCM01001279    CM000070    EAL26693.1    CH479186    EDW39177.1    CH954181    EDV49810.1    AK356999    BAJ88214.1    GFDG01001536    JAV17263.1    GFDG01001534    JAV17265.1    GFDG01001537    JAV17262.1    CH933806    EDW16257.2    GFDL01007382    JAV27663.1    KQ434869    KZC09382.1    GFDG01001535    JAV17264.1    GFDG01001533    JAV17266.1    CH916377    EDV90798.1    ABLF02032533    OUUW01000005    SPP80176.1   
Pfam
PF07850   Renin_r        + More
PF14327   CSTF2_hinge
PF00076   RRM_1
PF01363   FYVE
PF02759   RUN
Interpro
IPR012493   Renin_rcpt        + More
IPR012677   Nucleotide-bd_a/b_plait_sf       
IPR025742   CSTF2_hinge       
IPR000504   RRM_dom       
IPR035979   RBD_domain_sf       
IPR004012   Run_dom       
IPR011011   Znf_FYVE_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR017455   Znf_FYVE-rel       
IPR037213   Run_dom_sf       
IPR000306   Znf_FYVE       
SUPFAM
SSF54928   SSF54928        + More
SSF57903   SSF57903       
SSF140741   SSF140741       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 21,         Likelihood:  0.931742
 
 
Length:
337
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
39.80852
Exp number, first 60 AAs:
17.35681
Total prob of N-in:
0.76579
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  291
TMhelix
292  -  314
inside
315  -  337
 
 

Population Genetic Test Statistics

Pi
221.480527
Theta
160.982375
Tajima's D
0.995966
CLR
0.083256
CSRT
0.658417079146043
Interpretation
Uncertain
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