SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO03393
Pre Gene Modal
BGIBMGA006381
Annotation
PREDICTED:_uncharacterized_protein_LOC106122490_[Papilio_xuthus]
Location in the cell
Extracellular   Reliability : 1.417 Mitochondrial   Reliability : 1.311
 

Sequence

CDS
ATGAACATTTCTTTTTCAGGAAAACCTGGTACCGATTATCCAATTTTAGGAGCTGTTCCGTACACCAACTTTTACTGTGATGAGCAGCAATATCCAGGGTTTTTCGCTGATATGGAAACTCGCTGTCAAGCGTGGCATTACTGTGACATCGATGGCCGTCAAGCATCGTTTCTCTGCCCCAACGGTACGGTGTTCTCCCAAGGCGTTGCTTCCTGCGACTGGTGGTTTAACGTTCGATGTGCGCTCTCCCCAGCACTGTACCCTTTGAATGCAAGACTGTATCGTCGTAAAAGGAAACAGAACCGGCCTAAGCCGCACAGGTTGATAGATAAAAAGCTTGTTGATGAAATTTTCTTGTAA
Protein
MNISFSGKPGTDYPILGAVPYTNFYCDEQQYPGFFADMETRCQAWHYCDIDGRQASFLCPNGTVFSQGVASCDWWFNVRCALSPALYPLNARLYRRKRKQNRPKPHRLIDKKLVDEIFL

Summary

EMBL
KQ459551    KPI99940.1    AGBW02009294    OWR51136.1    NWSH01001655    PCG70519.1    + More
ODYU01000911    SOQ36387.1    UFQS01000567    UFQT01000567    SSX05021.1    SSX25383.1    CVRI01000041    CRK95362.1    CH902617    EDV42661.2    CH964272    EDW84521.2    UFQT01004414    SSX35681.1    GAMC01005822    JAC00734.1    GBXI01013540    GBXI01001083    GBXI01000756    JAD00752.1    JAD13209.1    JAD13536.1    ATLV01015013    KE524999    KFB39918.1    GAKP01008534    GAKP01008533    GAKP01008532    JAC50419.1    GDHF01021761    GDHF01010408    GDHF01002949    JAI30553.1    JAI41906.1    JAI49365.1    AXCN02000856    BT029054    ABJ16987.1    CM000070    EAL27671.3    CH479179    EDW24832.1    JXUM01132064    KQ567796    KXJ69278.1    JRES01001362    KNC23350.1    CH940652    EDW59339.2    OUUW01000013    SPP87980.1    CH916369    EDV93281.1    CH480820    EDW54630.1    CH954181    EDV48584.1    CH918564    EDW04844.1    CM000364    EDX12433.1    CH933806    EDW14422.2    AE014297    BT133136    AAF55573.2    AEY70766.1    AXCM01000925    AAAB01008839    EAA05936.4    CH477977    EAT34671.1    APCN01004577    CCAG010005922    CM000160    EDW95923.2    DS232221    EDS37817.1    CP012526    ALC46308.1    GBYB01012130    JAG81897.1    GBHO01037408    JAG06196.1    NEVH01009067    PNF34128.1    GBRD01002165    JAG63656.1    KK852865    KDR14750.1    GAHY01000122    JAA77388.1    MF942734    AWK28257.1    KK854069    PTY10656.1    GFTR01002503    JAW13923.1    GBBI01000739    JAC17973.1    KQ414797    KOC60703.1    ACPB03007373    ACPB03007374    ACPB03007375    ACPB03007376    GL442153    EFN63917.1    ADTU01010893    ADTU01010894    ADTU01010895    ADTU01010896    ADTU01010897    ADTU01010898    ADTU01010899    ADTU01010900    ADTU01010901    ADTU01010902    KQ981953    KYN32366.1    GL888158    EGI66405.1    KZ288208    PBC33021.1    ADMH02000042    ETN68011.1    ABLF02037948    GGMR01010634    MBY23253.1    KQ976760    KYN08523.1    KQ980151    KYN17508.1    NNAY01000248    OXU29717.1    KQ976417    KYM89695.1    GEBQ01013273    JAT26704.1    KQ435830    KOX71808.1    GECZ01020228    GECZ01018477    GECZ01012620    JAS49541.1    JAS51292.1    JAS57149.1    GECU01027221    JAS80485.1    APGK01040320    KB740979    KB629980    KB632268    ENN76390.1    ERL83314.1    ERL91042.1    KB631851    ERL86725.1    GU128084    KQ971312    ACY95467.1    EEZ98161.1    KQ982622    KYQ53721.1    GL449906    EFN81809.1    GEZM01002923    JAV97067.1    PYGN01001409    PSN35048.1    QOIP01000006    RLU21593.1   
Pfam
PF01607   CBM_14
Interpro
IPR036508   Chitin-bd_dom_sf        + More
IPR002557   Chitin-bd_dom       
SUPFAM
SSF57625   SSF57625       

Ontologies

Topology

Length:
119
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.61361
Exp number, first 60 AAs:
0.00361
Total prob of N-in:
0.07237
outside
1  -  119
 
 

Population Genetic Test Statistics

Pi
291.798633
Theta
164.840005
Tajima's D
2.656632
CLR
0.761921
CSRT
0.957702114894255
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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