Silkworm Genome Informatics Database

Gene

KWMTBOMO03392

Pre Gene Modal

BGIBMGA006382

Annotation

PREDICTED:_uncharacterized_protein_LOC101743233_[Bombyx_mori]

Location

Bomo_Chr6(-):6913366-6915771 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.314

CDS

ATGATGATAGATTACCCATTACATGGGAGTACTAGTCAACAGTTTCCGTTGCCAGTAACATCTGACGAAGAAGGGGGTACTCCGGGGAGTCCAGGAATAGATTACCCTATACTCACCGCTATACCACAGACATCTTTTAACTGCAAGACTCAGCGTTATAAGGGATTCTTCGCTGATACCGAAACTAGATGCCAGGTATGGCATTATTGTGACCTCAACGGTGGACAGGCTTCTTTTCTGTGCCCAAATGGCACAATATTTTCGCAGGCCGGCCTAACCTGTGACTGGTGGTTCAACGTTCGATGTGACTCTGCTACTCAGTTATACGTACTTAATGAAAGTCTATATAAATTTATTTTGCCGCATCGACCCAAGTTTCCAGAAGATTATAGCGGGCCGCTTGTTGATAAATACTTGACCCTAAAATTTAAAGAAATGGAAGAACAATTTAAGAAGAATAAAAACAAACAAAACGCATCAGAGAAGATCGATGCAGACGAAGACGAAAATTCTAAAGCATCAGAAGAGGATACAGACGATTCGAAAAGTGGCGATGCAAATGATAAATTATCAACTGTAAATACAGCTAGTGTTATCGTGGAGTCACCAGGTACAAGCGGCAATGTCGAGCGGCTTCACGAATAA

Protein

MMIDYPLHGSTSQQFPLPVTSDEEGGTPGSPGIDYPILTAIPQTSFNCKTQRYKGFFADTETRCQVWHYCDLNGGQASFLCPNGTIFSQAGLTCDWWFNVRCDSATQLYVLNESLYKFILPHRPKFPEDYSGPLVDKYLTLKFKEMEEQFKKNKNKQNASEKIDADEDENSKASEEDTDDSKSGDANDKLSTVNTASVIVESPGTSGNVERLHE

Uniprot

H9JA37 A0A0N1IP80 A0A212EM99 A0A2H1V6A3 A0A194Q326 A0A182F581 + More
W5JV40 A0A336MGL1

Pubmed

19121390 26354079 22118469 20920257 23761445

EMBL

BABH01009237 KQ460544 KPJ14096.1 AGBW02013864 OWR42607.1 ODYU01000911 + More
SOQ36385.1 KQ459551 KPI99941.1 ADMH02000042 ETN68011.1 UFQT01001210 SSX29514.1

Proteomes

UP000005204 UP000053240 UP000007151 UP000053268 UP000069272 UP000000673 + More

PRIDE

H9JA37

Pfam

PF01607 CBM_14

Interpro

IPR036508 Chitin-bd_dom_sf + More
IPR002557 Chitin-bd_dom

SUPFAM

SSF57625 SSF57625

ProteinModelPortal

H9JA37 A0A0N1IP80 A0A212EM99 A0A2H1V6A3 A0A194Q326 A0A182F581 + More
W5JV40 A0A336MGL1

KEGG

101743233 no KO assigned | (RefSeq) uncharacterized LOC101743233

GO

GO:0008061 GO:0005576 GO:0006030 GO:0016021 GO:0003700 GO:0005634 GO:0000287 GO:0003723 GO:0006270 GO:0042555 GO:0048384

Length:

214

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00394

Exp number, first 60 AAs:

0.00093

Total prob of N-in:

0.02436

outside

1 - 214

Pi

222.665079

Theta

191.967835

Tajima's D

0.606258

CLR

0.498296

CSRT

0.546722663866807

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree